data_A1CVR # _chem_comp.id A1CVR _chem_comp.name "(3M,4R)-1-([1,1'-biphenyl]-4-yl)-3-(2-methoxyphenyl)-1,5,6,7-tetrahydroimidazo[1,2-a]pyrimidine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C25 H23 N3 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-09-24 _chem_comp.pdbx_modified_date 2026-09-25 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 381.470 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1CVR _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9YE1 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? _chem_comp.pdbx_comp_type ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1CVR C1 C1 C 0 1 N N N N N N 17.180 42.788 -22.572 1.132 0.853 -0.207 C1 A1CVR 1 A1CVR N2 N1 N 0 1 N N N N N N 16.375 43.625 -21.919 0.202 -0.177 -0.183 N2 A1CVR 2 A1CVR C3 C2 C 0 1 N N N N N N 16.563 43.500 -20.617 0.881 -1.361 -0.245 C3 A1CVR 3 A1CVR C5 C3 C 0 1 N N N N N N 17.887 42.108 -21.567 2.362 0.315 -0.294 C5 A1CVR 4 A1CVR C6 C4 C 0 1 Y N N N N N 18.904 41.046 -21.840 3.636 1.062 -0.343 C6 A1CVR 5 A1CVR C7 C5 C 0 1 Y N N N N N 18.483 39.866 -22.456 3.851 2.018 -1.335 C7 A1CVR 6 A1CVR C8 C6 C 0 1 Y N N N N N 19.397 38.851 -22.734 5.043 2.713 -1.376 C8 A1CVR 7 A1CVR C9 C7 C 0 1 Y N N N N N 20.739 39.015 -22.399 6.027 2.464 -0.436 C9 A1CVR 8 A1CVR C10 C8 C 0 1 Y N N N N N 21.162 40.194 -21.786 5.825 1.519 0.553 C10 A1CVR 9 A1CVR N4 N2 N 0 1 N N N N N N 17.477 42.569 -20.357 2.224 -1.064 -0.329 N4 A1CVR 10 A1CVR C11 C9 C 0 1 Y N N N N N 20.248 41.216 -21.509 4.632 0.818 0.611 C11 A1CVR 11 A1CVR C12 C10 C 0 1 Y N N N N N 15.533 44.479 -22.525 -1.187 -0.030 -0.109 C12 A1CVR 12 A1CVR C13 C11 C 0 1 Y N N N N N 16.000 45.458 -23.408 -1.748 1.241 -0.051 C13 A1CVR 13 A1CVR C14 C12 C 0 1 Y N N N N N 15.170 46.364 -24.060 -3.116 1.389 0.023 C14 A1CVR 14 A1CVR C15 C13 C 0 1 Y N N N N N 13.796 46.322 -23.854 -3.938 0.263 0.039 C15 A1CVR 15 A1CVR C16 C14 C 0 1 Y N N N N N 13.283 45.361 -22.984 -3.374 -1.010 -0.019 C16 A1CVR 16 A1CVR C29 C15 C 0 1 N N N N N N 21.834 43.074 -21.352 5.492 -0.302 2.523 C29 A1CVR 17 A1CVR O28 O1 O 0 1 N N N N N N 20.672 42.375 -20.902 4.431 -0.107 1.586 O28 A1CVR 18 A1CVR C27 C16 C 0 1 N N N N N N 17.904 42.181 -19.012 3.263 -2.094 -0.445 C27 A1CVR 19 A1CVR C26 C17 C 0 1 N N N N N N 16.836 42.631 -18.011 2.608 -3.335 -1.070 C26 A1CVR 20 A1CVR C25 C18 C 0 1 N N N N N N 16.373 44.074 -18.238 1.355 -3.708 -0.276 C25 A1CVR 21 A1CVR N24 N3 N 0 1 N N N N N N 15.918 44.188 -19.624 0.415 -2.583 -0.239 N24 A1CVR 22 A1CVR C17 C19 C 0 1 Y N N N N N 14.142 44.464 -22.344 -2.005 -1.153 -0.098 C17 A1CVR 23 A1CVR C18 C20 C 0 1 Y N N N N N 12.910 47.298 -24.556 -5.411 0.420 0.119 C18 A1CVR 24 A1CVR C23 C21 C 0 1 Y N N N N N 11.621 46.935 -24.959 -5.977 1.692 0.172 C23 A1CVR 25 A1CVR C22 C22 C 0 1 Y N N N N N 10.805 47.858 -25.614 -7.348 1.832 0.245 C22 A1CVR 26 A1CVR C21 C23 C 0 1 Y N N N N N 11.275 49.147 -25.870 -8.160 0.713 0.267 C21 A1CVR 27 A1CVR C20 C24 C 0 1 Y N N N N N 12.560 49.515 -25.472 -7.604 -0.553 0.214 C20 A1CVR 28 A1CVR C19 C25 C 0 1 Y N N N N N 13.374 48.592 -24.815 -6.234 -0.705 0.135 C19 A1CVR 29 A1CVR H1 H1 H 0 1 N N N N N N 17.269 42.660 -23.641 0.907 1.908 -0.167 H1 A1CVR 30 A1CVR H7 H2 H 0 1 N N N N N N 17.443 39.739 -22.719 3.085 2.214 -2.071 H7 A1CVR 31 A1CVR H8 H3 H 0 1 N N N N N N 19.065 37.939 -23.208 5.208 3.453 -2.145 H8 A1CVR 32 A1CVR H9 H4 H 0 1 N N N N N N 21.450 38.231 -22.613 6.957 3.012 -0.474 H9 A1CVR 33 A1CVR H10 H5 H 0 1 N N N N N N 22.202 40.319 -21.523 6.598 1.329 1.284 H10 A1CVR 34 A1CVR H13 H6 H 0 1 N N N N N N 17.062 45.514 -23.594 -1.110 2.113 -0.063 H13 A1CVR 35 A1CVR H14 H7 H 0 1 N N N N N N 15.593 47.101 -24.727 -3.551 2.376 0.068 H14 A1CVR 36 A1CVR H16 H8 H 0 1 N N N N N N 12.219 45.310 -22.804 -4.009 -1.884 -0.006 H16 A1CVR 37 A1CVR H291 H9 H 0 0 N N N N N N 21.989 43.967 -20.729 5.202 -1.066 3.246 H291 A1CVR 38 A1CVR H292 H10 H 0 0 N N N N N N 22.711 42.415 -21.273 6.389 -0.623 1.995 H292 A1CVR 39 A1CVR H293 H11 H 0 0 N N N N N N 21.696 43.377 -22.400 5.692 0.634 3.045 H293 A1CVR 40 A1CVR H271 H12 H 0 0 N N N N N N 18.863 42.665 -18.774 4.069 -1.737 -1.086 H271 A1CVR 41 A1CVR H272 H13 H 0 0 N N N N N N 18.022 41.089 -18.962 3.655 -2.338 0.543 H272 A1CVR 42 A1CVR H261 H14 H 0 0 N N N N N N 17.252 42.552 -16.996 2.332 -3.118 -2.102 H261 A1CVR 43 A1CVR H262 H15 H 0 0 N N N N N N 15.966 41.965 -18.104 3.312 -4.166 -1.049 H262 A1CVR 44 A1CVR H251 H16 H 0 0 N N N N N N 17.209 44.767 -18.061 0.873 -4.565 -0.747 H251 A1CVR 45 A1CVR H252 H17 H 0 0 N N N N N N 15.547 44.314 -17.553 1.640 -3.972 0.743 H252 A1CVR 46 A1CVR H17 H18 H 0 1 N N N N N N 13.716 43.726 -21.680 -1.567 -2.140 -0.143 H17 A1CVR 47 A1CVR H23 H19 H 0 1 N N N N N N 11.256 45.938 -24.763 -5.344 2.567 0.155 H23 A1CVR 48 A1CVR H22 H20 H 0 1 N N N N N N 9.810 47.575 -25.923 -7.788 2.818 0.287 H22 A1CVR 49 A1CVR H21 H21 H 0 1 N N N N N N 10.643 49.861 -26.377 -9.233 0.827 0.325 H21 A1CVR 50 A1CVR H20 H22 H 0 1 N N N N N N 12.924 50.512 -25.672 -8.242 -1.423 0.232 H20 A1CVR 51 A1CVR H19 H23 H 0 1 N N N N N N 14.368 48.878 -24.505 -5.801 -1.693 0.090 H19 A1CVR 52 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1CVR C1 N2 SING N N 1 A1CVR N2 C3 SING N N 2 A1CVR C3 N4 SING N N 3 A1CVR N4 C5 SING N N 4 A1CVR C1 C5 DOUB N N 5 A1CVR C5 C6 SING N N 6 A1CVR C6 C7 DOUB Y N 7 A1CVR C7 C8 SING Y N 8 A1CVR C8 C9 DOUB Y N 9 A1CVR C9 C10 SING Y N 10 A1CVR C10 C11 DOUB Y N 11 A1CVR C6 C11 SING Y N 12 A1CVR C12 N2 SING N N 13 A1CVR C12 C13 DOUB Y N 14 A1CVR C13 C14 SING Y N 15 A1CVR C14 C15 DOUB Y N 16 A1CVR C15 C16 SING Y N 17 A1CVR C16 C17 DOUB Y N 18 A1CVR C17 C12 SING Y N 19 A1CVR C18 C15 SING N N 20 A1CVR C18 C19 DOUB Y N 21 A1CVR C19 C20 SING Y N 22 A1CVR C20 C21 DOUB Y N 23 A1CVR C21 C22 SING Y N 24 A1CVR C22 C23 DOUB Y N 25 A1CVR C23 C18 SING Y N 26 A1CVR C3 N24 DOUB N N 27 A1CVR N24 C25 SING N N 28 A1CVR C25 C26 SING N N 29 A1CVR C26 C27 SING N N 30 A1CVR C27 N4 SING N N 31 A1CVR C11 O28 SING N N 32 A1CVR O28 C29 SING N N 33 A1CVR C1 H1 SING N N 34 A1CVR C7 H7 SING N N 35 A1CVR C8 H8 SING N N 36 A1CVR C9 H9 SING N N 37 A1CVR C10 H10 SING N N 38 A1CVR C13 H13 SING N N 39 A1CVR C14 H14 SING N N 40 A1CVR C16 H16 SING N N 41 A1CVR C29 H291 SING N N 42 A1CVR C29 H292 SING N N 43 A1CVR C29 H293 SING N N 44 A1CVR C27 H271 SING N N 45 A1CVR C27 H272 SING N N 46 A1CVR C26 H261 SING N N 47 A1CVR C26 H262 SING N N 48 A1CVR C25 H251 SING N N 49 A1CVR C25 H252 SING N N 50 A1CVR C17 H17 SING N N 51 A1CVR C23 H23 SING N N 52 A1CVR C22 H22 SING N N 53 A1CVR C21 H21 SING N N 54 A1CVR C20 H20 SING N N 55 A1CVR C19 H19 SING N N 56 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1CVR SMILES ACDLabs 14.52 "COc1ccccc1C1=CN(C2=NCCCN12)c1ccc(cc1)c1ccccc1" A1CVR InChI InChI 1.06 "InChI=1S/C25H23N3O/c1-29-24-11-6-5-10-22(24)23-18-28(25-26-16-7-17-27(23)25)21-14-12-20(13-15-21)19-8-3-2-4-9-19/h2-6,8-15,18H,7,16-17H2,1H3" A1CVR InChIKey InChI 1.06 INRATBVQSLELLM-UHFFFAOYSA-N A1CVR SMILES_CANONICAL CACTVS 3.385 "COc1ccccc1C2=CN(c3ccc(cc3)c4ccccc4)C5=NCCCN25" A1CVR SMILES CACTVS 3.385 "COc1ccccc1C2=CN(c3ccc(cc3)c4ccccc4)C5=NCCCN25" A1CVR SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "COc1ccccc1C2=CN(C3=NCCCN23)c4ccc(cc4)c5ccccc5" A1CVR SMILES "OpenEye OEToolkits" 3.1.0.0 "COc1ccccc1C2=CN(C3=NCCCN23)c4ccc(cc4)c5ccccc5" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1CVR "SYSTEMATIC NAME" ACDLabs 14.52 "(3M,4R)-1-([1,1'-biphenyl]-4-yl)-3-(2-methoxyphenyl)-1,5,6,7-tetrahydroimidazo[1,2-a]pyrimidine" A1CVR "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "3-(2-methoxyphenyl)-1-(4-phenylphenyl)-6,7-dihydro-5~{H}-imidazo[1,2-a]pyrimidine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1CVR "Create component" 2025-09-24 RCSB A1CVR "Initial release" 2026-09-30 RCSB #