data_A1CX5 # _chem_comp.id A1CX5 _chem_comp.name "1-[(8-cyclopropyl-9H-pyrimido[4,5-b]indol-4-yl)amino]-5,5-dimethylpyrrolidin-2-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C19 H21 N5 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-10-09 _chem_comp.pdbx_modified_date 2026-01-23 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 335.403 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1CX5 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 13RW _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1CX5 N2 N1 N 0 1 N N N N N N -45.129 -30.608 2.875 -1.626 0.514 -0.200 N2 A1CX5 1 A1CX5 C3 C1 C 0 1 N N N N N N -44.361 -30.048 -0.070 -3.985 -0.101 1.932 C3 A1CX5 2 A1CX5 C6 C2 C 0 1 N N N N N N -43.034 -31.734 2.512 -3.730 0.019 -1.304 C6 A1CX5 3 A1CX5 C9 C3 C 0 1 Y N N N N N -46.282 -30.029 6.351 1.165 -1.846 0.290 C9 A1CX5 4 A1CX5 C12 C4 C 0 1 Y N N N N N -48.438 -31.535 3.756 1.468 1.787 -0.237 C12 A1CX5 5 A1CX5 C14 C5 C 0 1 Y N N N N N -50.394 -31.825 5.194 3.861 1.875 -0.132 C14 A1CX5 6 A1CX5 C17 C6 C 0 1 N N N N N N -51.764 -30.706 7.856 6.250 -0.061 -0.916 C17 A1CX5 7 A1CX5 C19 C7 C 0 1 Y N N N N N -48.363 -30.846 6.087 2.749 -0.235 0.128 C19 A1CX5 8 A1CX5 C1 C8 C 0 1 N N N N N N -43.538 -28.368 1.635 -3.407 2.277 1.378 C1 A1CX5 9 A1CX5 C10 C9 C 0 1 Y N N N N N -46.370 -30.448 4.999 0.485 -0.637 0.076 C10 A1CX5 10 A1CX5 C11 C10 C 0 1 Y N N N N N -47.705 -30.972 4.825 1.513 0.410 -0.030 C11 A1CX5 11 A1CX5 C13 C11 C 0 1 Y N N N N N -49.769 -31.958 3.938 2.639 2.511 -0.287 C13 A1CX5 12 A1CX5 C15 C12 C 0 1 Y N N N N N -49.695 -31.264 6.279 3.920 0.513 0.076 C15 A1CX5 13 A1CX5 C16 C13 C 0 1 N N N N N N -50.326 -31.117 7.634 5.255 -0.165 0.242 C16 A1CX5 14 A1CX5 C18 C14 C 0 1 N N N N N N -51.340 -32.124 8.129 6.491 0.728 0.373 C18 A1CX5 15 A1CX5 C2 C15 C 0 1 N N N N N N -43.481 -29.837 1.176 -3.910 0.945 0.818 C2 A1CX5 16 A1CX5 C4 C16 C 0 1 N N N N N N -42.024 -30.272 0.900 -5.298 1.124 0.162 C4 A1CX5 17 A1CX5 C5 C17 C 0 1 N N N N N N -41.803 -31.604 1.634 -5.213 0.139 -1.027 C5 A1CX5 18 A1CX5 C7 C18 C 0 1 Y N N N N N -45.201 -30.247 4.222 -0.913 -0.654 0.010 C7 A1CX5 19 A1CX5 C8 C19 C 0 1 Y N N N N N -44.159 -29.353 6.092 -0.865 -2.933 0.353 C8 A1CX5 20 A1CX5 N1 N2 N 0 1 N N N N N N -43.902 -30.759 2.227 -3.025 0.479 -0.257 N1 A1CX5 21 A1CX5 N3 N3 N 0 1 Y N N N N N -44.103 -29.697 4.806 -1.541 -1.818 0.153 N3 A1CX5 22 A1CX5 N4 N4 N 0 1 Y N N N N N -45.183 -29.479 6.929 0.449 -2.962 0.422 N4 A1CX5 23 A1CX5 N5 N5 N 0 1 Y N N N N N -47.481 -30.278 6.998 2.513 -1.586 0.323 N5 A1CX5 24 A1CX5 O1 O1 O 0 1 N N N N N N -43.187 -32.617 3.351 -3.249 -0.432 -2.322 O1 A1CX5 25 A1CX5 H11 H1 H 0 1 N N N N N N -45.632 -29.908 2.368 -1.157 1.356 -0.303 H11 A1CX5 26 A1CX5 H6 H2 H 0 1 N N N N N N -45.391 -29.732 0.150 -4.681 0.236 2.701 H6 A1CX5 27 A1CX5 H5 H3 H 0 1 N N N N N N -43.965 -29.450 -0.904 -4.332 -1.048 1.518 H5 A1CX5 28 A1CX5 H4 H4 H 0 1 N N N N N N -44.355 -31.113 -0.347 -2.997 -0.237 2.371 H4 A1CX5 29 A1CX5 H13 H5 H 0 1 N N N N N N -47.972 -31.642 2.788 0.517 2.286 -0.359 H13 A1CX5 30 A1CX5 H15 H6 H 0 1 N N N N N N -51.414 -32.155 5.325 4.774 2.451 -0.172 H15 A1CX5 31 A1CX5 H18 H7 H 0 1 N N N N N N -52.022 -30.039 8.692 6.892 -0.921 -1.107 H18 A1CX5 32 A1CX5 H17 H8 H 0 1 N N N N N N -52.411 -30.482 6.995 5.939 0.498 -1.798 H17 A1CX5 33 A1CX5 H1 H9 H 0 1 N N N N N N -42.904 -28.236 2.525 -2.420 2.138 1.817 H1 A1CX5 34 A1CX5 H3 H10 H 0 1 N N N N N N -43.174 -27.717 0.826 -3.346 3.010 0.572 H3 A1CX5 35 A1CX5 H2 H11 H 0 1 N N N N N N -44.576 -28.101 1.882 -4.098 2.634 2.142 H2 A1CX5 36 A1CX5 H14 H12 H 0 1 N N N N N N -50.314 -32.387 3.110 2.605 3.579 -0.448 H14 A1CX5 37 A1CX5 H16 H13 H 0 1 N N N N N N -49.636 -30.761 8.413 5.243 -1.094 0.813 H16 A1CX5 38 A1CX5 H19 H14 H 0 1 N N N N N N -51.677 -32.935 7.467 7.291 0.388 1.030 H19 A1CX5 39 A1CX5 H20 H15 H 0 1 N N N N N N -51.288 -32.493 9.164 6.338 1.807 0.338 H20 A1CX5 40 A1CX5 H8 H16 H 0 1 N N N N N N -41.869 -30.406 -0.181 -6.094 0.838 0.849 H8 A1CX5 41 A1CX5 H7 H17 H 0 1 N N N N N N -41.325 -29.512 1.279 -5.435 2.147 -0.187 H7 A1CX5 42 A1CX5 H9 H18 H 0 1 N N N N N N -41.738 -32.439 0.921 -5.732 0.543 -1.895 H9 A1CX5 43 A1CX5 H10 H19 H 0 1 N N N N N N -40.888 -31.570 2.243 -5.628 -0.830 -0.749 H10 A1CX5 44 A1CX5 H12 H20 H 0 1 N N N N N N -43.261 -28.918 6.505 -1.411 -3.858 0.465 H12 A1CX5 45 A1CX5 H21 H21 H 0 1 N N N N N N -47.679 -30.082 7.959 3.203 -2.254 0.463 H21 A1CX5 46 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1CX5 C3 C2 SING N N 1 A1CX5 C4 C2 SING N N 2 A1CX5 C4 C5 SING N N 3 A1CX5 C2 C1 SING N N 4 A1CX5 C2 N1 SING N N 5 A1CX5 C5 C6 SING N N 6 A1CX5 N1 C6 SING N N 7 A1CX5 N1 N2 SING N N 8 A1CX5 C6 O1 DOUB N N 9 A1CX5 N2 C7 SING N N 10 A1CX5 C12 C13 DOUB Y N 11 A1CX5 C12 C11 SING Y N 12 A1CX5 C13 C14 SING Y N 13 A1CX5 C7 N3 DOUB Y N 14 A1CX5 C7 C10 SING Y N 15 A1CX5 N3 C8 SING Y N 16 A1CX5 C11 C10 SING Y N 17 A1CX5 C11 C19 DOUB Y N 18 A1CX5 C10 C9 DOUB Y N 19 A1CX5 C14 C15 DOUB Y N 20 A1CX5 C19 C15 SING Y N 21 A1CX5 C19 N5 SING Y N 22 A1CX5 C8 N4 DOUB Y N 23 A1CX5 C15 C16 SING N N 24 A1CX5 C9 N4 SING Y N 25 A1CX5 C9 N5 SING Y N 26 A1CX5 C16 C17 SING N N 27 A1CX5 C16 C18 SING N N 28 A1CX5 C17 C18 SING N N 29 A1CX5 N2 H11 SING N N 30 A1CX5 C3 H6 SING N N 31 A1CX5 C3 H5 SING N N 32 A1CX5 C3 H4 SING N N 33 A1CX5 C12 H13 SING N N 34 A1CX5 C14 H15 SING N N 35 A1CX5 C17 H18 SING N N 36 A1CX5 C17 H17 SING N N 37 A1CX5 C1 H1 SING N N 38 A1CX5 C1 H3 SING N N 39 A1CX5 C1 H2 SING N N 40 A1CX5 C13 H14 SING N N 41 A1CX5 C16 H16 SING N N 42 A1CX5 C18 H19 SING N N 43 A1CX5 C18 H20 SING N N 44 A1CX5 C4 H8 SING N N 45 A1CX5 C4 H7 SING N N 46 A1CX5 C5 H9 SING N N 47 A1CX5 C5 H10 SING N N 48 A1CX5 C8 H12 SING N N 49 A1CX5 N5 H21 SING N N 50 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1CX5 SMILES ACDLabs 14.52 "O=C1CCC(C)(C)N1Nc1ncnc2[NH]c3c(cccc3C3CC3)c12" A1CX5 InChI InChI 1.06 "InChI=1S/C19H21N5O/c1-19(2)9-8-14(25)24(19)23-18-15-13-5-3-4-12(11-6-7-11)16(13)22-17(15)20-10-21-18/h3-5,10-11H,6-9H2,1-2H3,(H2,20,21,22,23)" A1CX5 InChIKey InChI 1.06 WHFVEMQFBWROQI-UHFFFAOYSA-N A1CX5 SMILES_CANONICAL CACTVS 3.385 "CC1(C)CCC(=O)N1Nc2ncnc3[nH]c4c(cccc4c23)C5CC5" A1CX5 SMILES CACTVS 3.385 "CC1(C)CCC(=O)N1Nc2ncnc3[nH]c4c(cccc4c23)C5CC5" A1CX5 SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "CC1(CCC(=O)N1Nc2c3c4cccc(c4[nH]c3ncn2)C5CC5)C" A1CX5 SMILES "OpenEye OEToolkits" 3.1.0.0 "CC1(CCC(=O)N1Nc2c3c4cccc(c4[nH]c3ncn2)C5CC5)C" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1CX5 "SYSTEMATIC NAME" ACDLabs 14.52 "1-[(8-cyclopropyl-9H-pyrimido[4,5-b]indol-4-yl)amino]-5,5-dimethylpyrrolidin-2-one" A1CX5 "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "1-[(8-cyclopropyl-9~{H}-pyrimido[4,5-b]indol-4-yl)amino]-5,5-dimethyl-pyrrolidin-2-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1CX5 "Create component" 2025-10-09 RCSB A1CX5 "Initial release" 2026-01-28 RCSB #