data_A1CX6 # _chem_comp.id A1CX6 _chem_comp.name "(4M)-4-(4-{[8-(methanesulfonyl)-2-oxo-3-oxa-1,8-diazaspiro[4.5]decan-1-yl]amino}-7H-pyrrolo[2,3-d]pyrimidin-6-yl)-1-methyl-1H-pyrazole-5-carbonitrile" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C19 H21 N9 O4 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-10-09 _chem_comp.pdbx_modified_date 2026-01-23 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 471.493 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1CX6 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 13RX _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1CX6 N2 N1 N 0 1 Y N N N N N -51.746 -29.919 8.090 5.315 2.148 1.211 N2 A1CX6 1 A1CX6 C3 C1 C 0 1 Y N N N N N -49.914 -29.763 6.751 4.091 0.527 0.351 C3 A1CX6 2 A1CX6 C6 C2 C 0 1 Y N N N N N -46.492 -29.901 5.342 0.844 -1.109 -0.332 C6 A1CX6 3 A1CX6 C9 C3 C 0 1 N N N N N N -42.446 -31.326 1.235 -5.006 -1.689 0.763 C9 A1CX6 4 A1CX6 C12 C4 C 0 1 N N N N N N -45.836 -29.821 0.046 -2.690 1.352 1.323 C12 A1CX6 5 A1CX6 C14 C5 C 0 1 N N N N N N -44.539 -27.997 1.146 -2.571 0.656 -1.106 C14 A1CX6 6 A1CX6 C17 C6 C 0 1 Y N N N N N -46.281 -29.598 6.710 1.633 -1.556 -1.410 C17 A1CX6 7 A1CX6 C19 C7 C 0 1 N N N N N N -51.043 -28.959 4.692 5.891 -1.177 -0.136 C19 A1CX6 8 A1CX6 C1 C8 C 0 1 N N N N N N -53.508 -29.207 6.576 7.624 1.073 1.062 C1 A1CX6 9 A1CX6 C10 C9 C 0 1 N N N N N N -43.704 -30.440 1.304 -3.820 -0.735 0.548 C10 A1CX6 10 A1CX6 C11 C10 C 0 1 N N N N N N -44.624 -30.750 0.111 -3.909 0.442 1.514 C11 A1CX6 11 A1CX6 C13 C11 C 0 1 N N N N N N -45.687 -25.813 -1.000 -0.745 3.694 -0.569 C13 A1CX6 12 A1CX6 C15 C12 C 0 1 N N N N N N -43.342 -28.940 1.354 -3.791 -0.248 -0.897 C15 A1CX6 13 A1CX6 C16 C13 C 0 1 Y N N N N N -44.070 -29.535 6.475 -0.179 -2.734 -2.200 C16 A1CX6 14 A1CX6 C18 C14 C 0 1 Y N N N N N -51.010 -29.384 6.035 5.415 0.086 0.341 C18 A1CX6 15 A1CX6 C2 C15 C 0 1 Y N N N N N -50.430 -30.077 8.036 4.088 1.820 0.905 C2 A1CX6 16 A1CX6 C4 C16 C 0 1 Y N N N N N -48.513 -29.805 6.342 2.914 -0.223 -0.129 C4 A1CX6 17 A1CX6 C5 C17 C 0 1 Y N N N N N -47.910 -30.014 5.125 1.699 -0.250 0.478 C5 A1CX6 18 A1CX6 C7 C18 C 0 1 Y N N N N N -45.311 -30.002 4.569 -0.494 -1.533 -0.256 C7 A1CX6 19 A1CX6 C8 C19 C 0 1 N N N N N N -43.673 -32.028 3.060 -3.047 -2.789 1.174 C8 A1CX6 20 A1CX6 N1 N2 N 0 1 Y N N N N N -52.113 -29.486 6.858 6.172 1.094 0.875 N1 A1CX6 21 A1CX6 N3 N3 N 0 1 N N N N N N -45.351 -30.298 3.205 -1.310 -1.122 0.782 N3 A1CX6 22 A1CX6 N4 N4 N 0 1 N N N N N N -44.279 -30.909 2.551 -2.641 -1.555 0.841 N4 A1CX6 23 A1CX6 N5 N5 N 0 1 N N N N N N -45.418 -28.407 0.038 -2.596 1.723 -0.095 N5 A1CX6 24 A1CX6 N6 N6 N 0 1 Y N N N N N -44.106 -29.818 5.171 -0.955 -2.339 -1.207 N6 A1CX6 25 A1CX6 N7 N7 N 0 1 Y N N N N N -45.087 -29.405 7.321 1.079 -2.367 -2.310 N7 A1CX6 26 A1CX6 N8 N8 N 0 1 Y N N N N N -47.529 -29.539 7.285 2.878 -1.007 -1.263 N8 A1CX6 27 A1CX6 N9 N9 N 0 1 N N N N N N -51.058 -28.610 3.590 6.268 -2.180 -0.515 N9 A1CX6 28 A1CX6 O1 O1 O 0 1 N N N N N N -44.011 -32.704 4.022 -2.279 -3.684 1.468 O1 A1CX6 29 A1CX6 O2 O2 O 0 1 N N N N N N -42.615 -32.251 2.292 -4.377 -2.945 1.153 O2 A1CX6 30 A1CX6 O3 O3 O 0 1 N N N N N N -47.331 -27.913 -1.569 -3.165 4.010 0.510 O3 A1CX6 31 A1CX6 O4 O4 O 0 1 N N N N N N -47.373 -26.909 0.773 -3.048 3.330 -1.866 O4 A1CX6 32 A1CX6 S1 S1 S 0 1 N N N N N N -46.637 -27.284 -0.434 -2.519 3.314 -0.547 S1 A1CX6 33 A1CX6 H8 H1 H 0 1 N N N N N N -42.387 -31.846 0.267 -5.654 -1.321 1.559 H8 A1CX6 34 A1CX6 H7 H2 H 0 1 N N N N N N -41.537 -30.725 1.384 -5.569 -1.814 -0.162 H7 A1CX6 35 A1CX6 H12 H3 H 0 1 N N N N N N -46.476 -30.002 0.922 -2.806 2.250 1.929 H12 A1CX6 36 A1CX6 H11 H4 H 0 1 N N N N N N -46.403 -30.034 -0.872 -1.787 0.821 1.625 H11 A1CX6 37 A1CX6 H17 H5 H 0 1 N N N N N N -44.156 -26.988 0.933 -1.658 0.070 -0.996 H17 A1CX6 38 A1CX6 H16 H6 H 0 1 N N N N N N -45.132 -27.976 2.072 -2.607 1.094 -2.103 H16 A1CX6 39 A1CX6 H3 H7 H 0 1 N N N N N N -54.111 -29.403 7.475 8.111 1.469 0.171 H3 A1CX6 40 A1CX6 H1 H8 H 0 1 N N N N N N -53.619 -28.152 6.284 7.889 1.686 1.923 H1 A1CX6 41 A1CX6 H2 H9 H 0 1 N N N N N N -53.852 -29.853 5.755 7.954 0.047 1.231 H2 A1CX6 42 A1CX6 H10 H10 H 0 1 N N N N N N -44.980 -31.787 0.201 -3.929 0.071 2.539 H10 A1CX6 43 A1CX6 H9 H11 H 0 1 N N N N N N -44.045 -30.640 -0.818 -4.819 1.008 1.315 H9 A1CX6 44 A1CX6 H13 H12 H 0 1 N N N N N N -45.174 -25.354 -0.142 -0.327 3.532 0.425 H13 A1CX6 45 A1CX6 H15 H13 H 0 1 N N N N N N -44.943 -26.123 -1.748 -0.243 3.043 -1.284 H15 A1CX6 46 A1CX6 H14 H14 H 0 1 N N N N N N -46.376 -25.082 -1.449 -0.600 4.734 -0.859 H14 A1CX6 47 A1CX6 H18 H15 H 0 1 N N N N N N -42.602 -28.737 0.566 -4.700 0.314 -1.110 H18 A1CX6 48 A1CX6 H19 H16 H 0 1 N N N N N N -42.899 -28.724 2.338 -3.727 -1.105 -1.568 H19 A1CX6 49 A1CX6 H20 H17 H 0 1 N N N N N N -43.086 -29.393 6.898 -0.593 -3.393 -2.950 H20 A1CX6 50 A1CX6 H4 H18 H 0 1 N N N N N N -49.825 -30.405 8.868 3.215 2.440 1.052 H4 A1CX6 51 A1CX6 H5 H19 H 0 1 N N N N N N -48.404 -30.223 4.188 1.420 0.266 1.385 H5 A1CX6 52 A1CX6 H6 H20 H 0 1 N N N N N N -45.509 -29.430 2.734 -0.961 -0.533 1.470 H6 A1CX6 53 A1CX6 H21 H21 H 0 1 N N N N N N -47.703 -29.333 8.248 3.624 -1.148 -1.866 H21 A1CX6 54 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1CX6 O3 S1 DOUB N N 1 A1CX6 C13 S1 SING N N 2 A1CX6 S1 N5 SING N N 3 A1CX6 S1 O4 DOUB N N 4 A1CX6 N5 C12 SING N N 5 A1CX6 N5 C14 SING N N 6 A1CX6 C12 C11 SING N N 7 A1CX6 C11 C10 SING N N 8 A1CX6 C14 C15 SING N N 9 A1CX6 C9 C10 SING N N 10 A1CX6 C9 O2 SING N N 11 A1CX6 C10 C15 SING N N 12 A1CX6 C10 N4 SING N N 13 A1CX6 O2 C8 SING N N 14 A1CX6 N4 C8 SING N N 15 A1CX6 N4 N3 SING N N 16 A1CX6 C8 O1 DOUB N N 17 A1CX6 N3 C7 SING N N 18 A1CX6 N9 C19 TRIP N N 19 A1CX6 C7 N6 DOUB Y N 20 A1CX6 C7 C6 SING Y N 21 A1CX6 C19 C18 SING N N 22 A1CX6 C5 C6 SING Y N 23 A1CX6 C5 C4 DOUB Y N 24 A1CX6 N6 C16 SING Y N 25 A1CX6 C6 C17 DOUB Y N 26 A1CX6 C18 C3 DOUB Y N 27 A1CX6 C18 N1 SING Y N 28 A1CX6 C4 C3 SING N N 29 A1CX6 C4 N8 SING Y N 30 A1CX6 C16 N7 DOUB Y N 31 A1CX6 C1 N1 SING N N 32 A1CX6 C17 N8 SING Y N 33 A1CX6 C17 N7 SING Y N 34 A1CX6 C3 C2 SING Y N 35 A1CX6 N1 N2 SING Y N 36 A1CX6 C2 N2 DOUB Y N 37 A1CX6 C9 H8 SING N N 38 A1CX6 C9 H7 SING N N 39 A1CX6 C12 H12 SING N N 40 A1CX6 C12 H11 SING N N 41 A1CX6 C14 H17 SING N N 42 A1CX6 C14 H16 SING N N 43 A1CX6 C1 H3 SING N N 44 A1CX6 C1 H1 SING N N 45 A1CX6 C1 H2 SING N N 46 A1CX6 C11 H10 SING N N 47 A1CX6 C11 H9 SING N N 48 A1CX6 C13 H13 SING N N 49 A1CX6 C13 H15 SING N N 50 A1CX6 C13 H14 SING N N 51 A1CX6 C15 H18 SING N N 52 A1CX6 C15 H19 SING N N 53 A1CX6 C16 H20 SING N N 54 A1CX6 C2 H4 SING N N 55 A1CX6 C5 H5 SING N N 56 A1CX6 N3 H6 SING N N 57 A1CX6 N8 H21 SING N N 58 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1CX6 SMILES ACDLabs 14.52 "N#Cc1n(C)ncc1c1cc2c([NH]1)ncnc2NN1C(=O)OCC21CCN(CC2)S(C)(=O)=O" A1CX6 InChI InChI 1.06 "InChI=1S/C19H21N9O4S/c1-26-15(8-20)13(9-23-26)14-7-12-16(24-14)21-11-22-17(12)25-28-18(29)32-10-19(28)3-5-27(6-4-19)33(2,30)31/h7,9,11H,3-6,10H2,1-2H3,(H2,21,22,24,25)" A1CX6 InChIKey InChI 1.06 HLVQNOZEPMHQPC-UHFFFAOYSA-N A1CX6 SMILES_CANONICAL CACTVS 3.385 "Cn1ncc(c2[nH]c3ncnc(NN4C(=O)OCC45CCN(CC5)[S](C)(=O)=O)c3c2)c1C#N" A1CX6 SMILES CACTVS 3.385 "Cn1ncc(c2[nH]c3ncnc(NN4C(=O)OCC45CCN(CC5)[S](C)(=O)=O)c3c2)c1C#N" A1CX6 SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "Cn1c(c(cn1)c2cc3c([nH]2)ncnc3NN4C(=O)OCC45CCN(CC5)S(=O)(=O)C)C#N" A1CX6 SMILES "OpenEye OEToolkits" 3.1.0.0 "Cn1c(c(cn1)c2cc3c([nH]2)ncnc3NN4C(=O)OCC45CCN(CC5)S(=O)(=O)C)C#N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1CX6 "SYSTEMATIC NAME" ACDLabs 14.52 "(4M)-4-(4-{[8-(methanesulfonyl)-2-oxo-3-oxa-1,8-diazaspiro[4.5]decan-1-yl]amino}-7H-pyrrolo[2,3-d]pyrimidin-6-yl)-1-methyl-1H-pyrazole-5-carbonitrile" A1CX6 "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "2-methyl-4-[4-[(8-methylsulfonyl-2-oxidanylidene-3-oxa-1,8-diazaspiro[4.5]decan-1-yl)amino]-7~{H}-pyrrolo[2,3-d]pyrimidin-6-yl]pyrazole-3-carbonitrile" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1CX6 "Create component" 2025-10-09 RCSB A1CX6 "Initial release" 2026-01-28 RCSB #