data_A1CZ5 # _chem_comp.id A1CZ5 _chem_comp.name "4-{[3-(trifluoromethyl)phenyl]methyl}-1-{[4-(trifluoromethyl)phenyl]methyl}piperazin-2-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C20 H18 F6 N2 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-11-07 _chem_comp.pdbx_modified_date 2026-09-11 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 416.360 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1CZ5 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9Z3C _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1CZ5 C10 C1 C 0 1 Y N N N N N -38.144 -58.113 -7.687 -5.702 -0.404 -0.073 C10 A1CZ5 1 A1CZ5 C15 C2 C 0 1 Y N N N N N -38.993 -59.032 -7.077 -4.596 0.028 -0.781 C15 A1CZ5 2 A1CZ5 C17 C3 C 0 1 N N N N N N -43.016 -60.401 -3.511 0.512 1.820 -0.576 C17 A1CZ5 3 A1CZ5 C20 C4 C 0 1 Y N N N N N -43.977 -57.866 -1.302 3.294 1.003 0.961 C20 A1CZ5 4 A1CZ5 C21 C5 C 0 1 Y N N N N N -44.667 -57.425 -0.173 3.779 -0.193 1.455 C21 A1CZ5 5 A1CZ5 C22 C6 C 0 1 Y N N N N N -44.069 -56.579 0.763 4.990 -0.686 1.006 C22 A1CZ5 6 A1CZ5 C24 C7 C 0 1 N N N N N N -42.081 -55.225 1.614 7.035 -0.521 -0.427 C24 A1CZ5 7 A1CZ5 C28 C8 C 0 1 Y N N N N N -42.053 -56.586 -0.529 5.229 1.212 -0.433 C28 A1CZ5 8 A1CZ5 C02 C9 C 0 1 N N N N N N -43.732 -58.271 -4.623 0.303 -0.114 0.927 C02 A1CZ5 9 A1CZ5 C03 C10 C 0 1 N N N N N N -42.886 -58.675 -5.823 -0.786 -0.734 0.099 C03 A1CZ5 10 A1CZ5 C05 C11 C 0 1 N N N N N N -41.249 -60.156 -6.844 -2.315 -0.351 -1.739 C05 A1CZ5 11 A1CZ5 C06 C12 C 0 1 Y N N N N N -40.319 -59.163 -7.495 -3.521 -0.821 -0.968 C06 A1CZ5 12 A1CZ5 C07 C13 C 0 1 Y N N N N N -40.763 -58.354 -8.544 -3.552 -2.101 -0.447 C07 A1CZ5 13 A1CZ5 C08 C14 C 0 1 Y N N N N N -39.903 -57.438 -9.147 -4.659 -2.533 0.261 C08 A1CZ5 14 A1CZ5 C09 C15 C 0 1 Y N N N N N -38.586 -57.309 -8.726 -5.734 -1.684 0.447 C09 A1CZ5 15 A1CZ5 C11 C16 C 0 1 N N N N N N -36.683 -57.978 -7.218 -6.872 0.524 0.136 C11 A1CZ5 16 A1CZ5 C16 C17 C 0 1 N N N N N N -42.512 -60.814 -4.887 -0.276 0.947 -1.553 C16 A1CZ5 17 A1CZ5 C19 C18 C 0 1 N N N N N N -44.608 -58.779 -2.320 1.974 1.541 1.451 C19 A1CZ5 18 A1CZ5 C23 C19 C 0 1 Y N N N N N -42.756 -56.157 0.588 5.715 0.016 0.063 C23 A1CZ5 19 A1CZ5 C29 C20 C 0 1 Y N N N N N -42.660 -57.428 -1.456 4.022 1.709 0.021 C29 A1CZ5 20 A1CZ5 F12 F1 F 0 1 N N N N N N -35.885 -58.954 -7.643 -7.859 -0.132 0.879 F12 A1CZ5 21 A1CZ5 F13 F2 F 0 1 N N N N N N -36.534 -57.965 -5.902 -6.446 1.663 0.827 F13 A1CZ5 22 A1CZ5 F14 F3 F 0 1 N N N N N N -36.113 -56.853 -7.642 -7.396 0.900 -1.106 F14 A1CZ5 23 A1CZ5 F25 F4 F 0 1 N N N N N N -42.929 -54.504 2.345 8.066 -0.036 0.385 F25 A1CZ5 24 A1CZ5 F26 F5 F 0 1 N N N N N N -41.333 -55.878 2.498 7.018 -1.919 -0.373 F26 A1CZ5 25 A1CZ5 F27 F6 F 0 1 N N N N N N -41.261 -54.335 1.064 7.247 -0.108 -1.746 F27 A1CZ5 26 A1CZ5 N04 N1 N 0 1 N N N N N N -41.829 -59.680 -5.556 -1.353 0.266 -0.816 N04 A1CZ5 27 A1CZ5 N18 N2 N 0 1 N N N N N N -43.796 -59.140 -3.498 0.895 1.039 0.597 N18 A1CZ5 28 A1CZ5 O01 O1 O 0 1 N N N N N N -44.355 -57.225 -4.650 0.662 -0.683 1.936 O01 A1CZ5 29 A1CZ5 H151 H1 H 0 0 N N N N N N -38.623 -59.650 -6.272 -4.572 1.028 -1.187 H151 A1CZ5 30 A1CZ5 H171 H2 H 0 0 N N N N N N -43.657 -61.206 -3.123 1.410 2.195 -1.069 H171 A1CZ5 31 A1CZ5 H172 H3 H 0 0 N N N N N N -42.146 -60.274 -2.850 -0.106 2.661 -0.263 H172 A1CZ5 32 A1CZ5 H211 H4 H 0 0 N N N N N N -45.687 -57.745 -0.019 3.212 -0.742 2.193 H211 A1CZ5 33 A1CZ5 H221 H5 H 0 0 N N N N N N -44.629 -56.251 1.626 5.369 -1.621 1.393 H221 A1CZ5 34 A1CZ5 H281 H6 H 0 0 N N N N N N -41.033 -56.266 -0.679 5.796 1.761 -1.170 H281 A1CZ5 35 A1CZ5 H031 H7 H 0 0 N N N N N N -43.560 -59.089 -6.588 -0.375 -1.562 -0.479 H031 A1CZ5 36 A1CZ5 H032 H8 H 0 0 N N N N N N -42.400 -57.769 -6.214 -1.572 -1.107 0.756 H032 A1CZ5 37 A1CZ5 H051 H9 H 0 0 N N N N N N -42.075 -60.366 -7.540 -1.848 -1.200 -2.237 H051 A1CZ5 38 A1CZ5 H052 H10 H 0 0 N N N N N N -40.688 -61.082 -6.651 -2.624 0.382 -2.485 H052 A1CZ5 39 A1CZ5 H071 H11 H 0 0 N N N N N N -41.782 -58.439 -8.891 -2.712 -2.764 -0.593 H071 A1CZ5 40 A1CZ5 H081 H12 H 0 0 N N N N N N -40.266 -56.819 -9.954 -4.683 -3.533 0.667 H081 A1CZ5 41 A1CZ5 H091 H13 H 0 0 N N N N N N -37.922 -56.599 -9.197 -6.598 -2.021 1.000 H091 A1CZ5 42 A1CZ5 H161 H14 H 0 0 N N N N N N -43.365 -61.136 -5.503 -0.707 1.571 -2.336 H161 A1CZ5 43 A1CZ5 H162 H15 H 0 0 N N N N N N -41.804 -61.648 -4.777 0.388 0.205 -1.998 H162 A1CZ5 44 A1CZ5 H191 H16 H 0 0 N N N N N N -45.521 -58.286 -2.686 1.807 1.215 2.477 H191 A1CZ5 45 A1CZ5 H192 H17 H 0 0 N N N N N N -44.877 -59.713 -1.805 1.990 2.631 1.414 H192 A1CZ5 46 A1CZ5 H291 H18 H 0 0 N N N N N N -42.097 -57.752 -2.319 3.645 2.645 -0.362 H291 A1CZ5 47 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1CZ5 C02 O01 DOUB N N 1 A1CZ5 C03 C02 SING N N 2 A1CZ5 N04 C03 SING N N 3 A1CZ5 C06 C05 SING N N 4 A1CZ5 C07 C06 DOUB Y N 5 A1CZ5 C08 C07 SING Y N 6 A1CZ5 C09 C08 DOUB Y N 7 A1CZ5 C10 C09 SING Y N 8 A1CZ5 F12 C11 SING N N 9 A1CZ5 F13 C11 SING N N 10 A1CZ5 F14 C11 SING N N 11 A1CZ5 C11 C10 SING N N 12 A1CZ5 C15 C10 DOUB Y N 13 A1CZ5 C05 N04 SING N N 14 A1CZ5 C16 N04 SING N N 15 A1CZ5 C17 C16 SING N N 16 A1CZ5 N18 C17 SING N N 17 A1CZ5 C19 N18 SING N N 18 A1CZ5 C20 C19 SING N N 19 A1CZ5 C21 C20 DOUB Y N 20 A1CZ5 C22 C21 SING Y N 21 A1CZ5 C23 C22 DOUB Y N 22 A1CZ5 F25 C24 SING N N 23 A1CZ5 F26 C24 SING N N 24 A1CZ5 F27 C24 SING N N 25 A1CZ5 C24 C23 SING N N 26 A1CZ5 C28 C23 SING Y N 27 A1CZ5 C29 C28 DOUB Y N 28 A1CZ5 C02 N18 SING N N 29 A1CZ5 C06 C15 SING Y N 30 A1CZ5 C20 C29 SING Y N 31 A1CZ5 C15 H151 SING N N 32 A1CZ5 C17 H171 SING N N 33 A1CZ5 C17 H172 SING N N 34 A1CZ5 C21 H211 SING N N 35 A1CZ5 C22 H221 SING N N 36 A1CZ5 C28 H281 SING N N 37 A1CZ5 C03 H031 SING N N 38 A1CZ5 C03 H032 SING N N 39 A1CZ5 C05 H051 SING N N 40 A1CZ5 C05 H052 SING N N 41 A1CZ5 C07 H071 SING N N 42 A1CZ5 C08 H081 SING N N 43 A1CZ5 C09 H091 SING N N 44 A1CZ5 C16 H161 SING N N 45 A1CZ5 C16 H162 SING N N 46 A1CZ5 C19 H191 SING N N 47 A1CZ5 C19 H192 SING N N 48 A1CZ5 C29 H291 SING N N 49 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1CZ5 SMILES ACDLabs 14.52 "FC(F)(F)c1ccc(cc1)CN1CCN(Cc2cc(ccc2)C(F)(F)F)CC1=O" A1CZ5 InChI InChI 1.06 "InChI=1S/C20H18F6N2O/c21-19(22,23)16-6-4-14(5-7-16)12-28-9-8-27(13-18(28)29)11-15-2-1-3-17(10-15)20(24,25)26/h1-7,10H,8-9,11-13H2" A1CZ5 InChIKey InChI 1.06 FMSMCCDRQVHJID-UHFFFAOYSA-N A1CZ5 SMILES_CANONICAL CACTVS 3.385 "FC(F)(F)c1ccc(CN2CCN(CC2=O)Cc3cccc(c3)C(F)(F)F)cc1" A1CZ5 SMILES CACTVS 3.385 "FC(F)(F)c1ccc(CN2CCN(CC2=O)Cc3cccc(c3)C(F)(F)F)cc1" A1CZ5 SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1cc(cc(c1)C(F)(F)F)CN2CCN(C(=O)C2)Cc3ccc(cc3)C(F)(F)F" A1CZ5 SMILES "OpenEye OEToolkits" 3.1.0.0 "c1cc(cc(c1)C(F)(F)F)CN2CCN(C(=O)C2)Cc3ccc(cc3)C(F)(F)F" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1CZ5 "SYSTEMATIC NAME" ACDLabs 14.52 "4-{[3-(trifluoromethyl)phenyl]methyl}-1-{[4-(trifluoromethyl)phenyl]methyl}piperazin-2-one" A1CZ5 "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "4-[[3-(trifluoromethyl)phenyl]methyl]-1-[[4-(trifluoromethyl)phenyl]methyl]piperazin-2-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1CZ5 "Create component" 2025-11-07 RCSB A1CZ5 "Initial release" 2026-09-16 RCSB #