data_A1CZE # _chem_comp.id A1CZE _chem_comp.name "(4M)-2-amino-4-(6-chloro-4-[(1R,5S)-3,8-diazabicyclo[3.2.1]octan-8-yl]-8-fluoro-2-{[(2R,4R,7aS)-2-fluorotetrahydro-1H-pyrrolizin-7a(5H)-yl]methoxy}quinazolin-7-yl)-7-fluoro-1-benzothiophene-3-carbonitrile" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C31 H29 Cl F3 N7 O S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2025-10-28 _chem_comp.pdbx_modified_date 2026-07-17 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 640.121 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1CZE _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9YMN _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1CZE C15 C1 C 0 1 N N N N N N 22.659 -8.813 20.650 -5.750 1.690 -0.971 C15 A1CZE 1 A1CZE C16 C2 C 0 1 N N R N N N 22.199 -10.137 21.259 -5.595 2.944 -1.872 C16 A1CZE 2 A1CZE F2 F1 F 0 1 N N N N N N 23.239 -11.056 21.280 -6.574 2.967 -2.872 F2 A1CZE 3 A1CZE C17 C3 C 0 1 N N N N N N 21.827 -9.773 22.697 -5.814 4.090 -0.854 C17 A1CZE 4 A1CZE N4 N1 N 0 1 N N N N N N 22.798 -8.713 23.073 -5.182 3.618 0.397 N4 A1CZE 5 A1CZE C12 C4 C 0 1 N N N N N N 23.998 -9.194 23.822 -6.018 4.017 1.551 C12 A1CZE 6 A1CZE C13 C5 C 0 1 N N N N N N 25.178 -8.384 23.281 -5.967 2.811 2.521 C13 A1CZE 7 A1CZE C14 C6 C 0 1 N N N N N N 24.817 -8.214 21.809 -5.962 1.614 1.533 C14 A1CZE 8 A1CZE C11 C7 C 0 1 N N S N N N 23.290 -8.064 21.828 -5.115 2.142 0.358 C11 A1CZE 9 A1CZE C10 C8 C 0 1 N N N N N N 22.920 -6.578 21.845 -3.671 1.646 0.465 C10 A1CZE 10 A1CZE O1 O1 O 0 1 N N N N N N 21.486 -6.572 21.914 -3.654 0.218 0.430 O1 A1CZE 11 A1CZE C1 C9 C 0 1 Y N N N N N 20.878 -5.382 22.146 -2.444 -0.385 0.515 C1 A1CZE 12 A1CZE N2 N2 N 0 1 Y N N N N N 19.539 -5.379 22.130 -1.370 0.369 0.629 N2 A1CZE 13 A1CZE C2 C10 C 0 1 Y N N N N N 18.884 -4.231 22.377 -0.153 -0.191 0.716 C2 A1CZE 14 A1CZE C5 C11 C 0 1 Y N N N N N 17.492 -4.197 22.363 1.008 0.584 0.837 C5 A1CZE 15 A1CZE F1 F2 F 0 1 N N N N N N 16.824 -5.348 22.119 0.927 1.932 0.871 F1 A1CZE 16 A1CZE N1 N3 N 0 1 Y N N N N N 21.608 -4.288 22.388 -2.391 -1.713 0.486 N1 A1CZE 17 A1CZE C4 C12 C 0 1 Y N N N N N 21.006 -3.113 22.631 -1.238 -2.361 0.566 C4 A1CZE 18 A1CZE N3 N4 N 0 1 N N N N N N 21.881 -2.060 22.782 -1.199 -3.739 0.533 N3 A1CZE 19 A1CZE C18 C13 C 0 1 N N R N N N 21.722 -0.850 21.966 -0.517 -4.225 -0.698 C18 A1CZE 20 A1CZE C23 C14 C 0 1 N N N N N N 22.607 -1.211 20.766 -1.571 -4.025 -1.812 C23 A1CZE 21 A1CZE C22 C15 C 0 1 N N N N N N 23.694 -2.116 21.350 -2.930 -4.081 -1.082 C22 A1CZE 22 A1CZE C21 C16 C 0 1 N N S N N N 23.332 -2.262 22.833 -2.568 -4.309 0.405 C21 A1CZE 23 A1CZE C20 C17 C 0 1 N N N N N N 23.977 -1.124 23.629 -2.444 -5.826 0.626 C20 A1CZE 24 A1CZE N5 N5 N 0 1 N N N N N N 23.699 0.189 23.032 -1.613 -6.399 -0.443 N5 A1CZE 25 A1CZE C19 C18 C 0 1 N N N N N N 22.279 0.384 22.687 -0.303 -5.738 -0.525 C19 A1CZE 26 A1CZE C3 C19 C 0 1 Y N N N N N 19.617 -3.074 22.611 -0.047 -1.603 0.684 C3 A1CZE 27 A1CZE C8 C20 C 0 1 Y N N N N N 18.837 -1.948 22.861 1.210 -2.214 0.773 C8 A1CZE 28 A1CZE C7 C21 C 0 1 Y N N N N N 17.450 -1.891 22.864 2.330 -1.447 0.891 C7 A1CZE 29 A1CZE CL1 CL1 CL 0 0 N N N N N N 16.566 -0.444 23.197 3.885 -2.211 1.001 CL1 A1CZE 30 A1CZE C6 C22 C 0 1 Y N N N N N 16.736 -3.052 22.594 2.241 -0.046 0.924 C6 A1CZE 31 A1CZE C9 C23 C 0 1 Y N N N N N 15.324 -3.189 22.571 3.473 0.765 1.052 C9 A1CZE 32 A1CZE C24 C24 C 0 1 Y N N N N N 14.543 -3.441 23.699 4.166 1.189 -0.113 C24 A1CZE 33 A1CZE C28 C25 C 0 1 Y N N N N N 14.679 -3.147 21.342 3.944 1.113 2.309 C28 A1CZE 34 A1CZE C27 C26 C 0 1 Y N N N N N 13.303 -3.329 21.220 5.094 1.871 2.434 C27 A1CZE 35 A1CZE C26 C27 C 0 1 Y N N N N N 12.550 -3.584 22.363 5.779 2.285 1.311 C26 A1CZE 36 A1CZE F3 F3 F 0 1 N N N N N N 11.221 -3.760 22.316 6.901 3.025 1.447 F3 A1CZE 37 A1CZE C25 C28 C 0 1 Y N N N N N 13.170 -3.633 23.607 5.322 1.950 0.031 C25 A1CZE 38 A1CZE S1 S1 S 0 1 Y N N N N N 12.387 -3.976 25.102 5.997 2.345 -1.545 S1 A1CZE 39 A1CZE C30 C29 C 0 1 Y N N N N N 13.869 -3.817 25.964 4.724 1.492 -2.394 C30 A1CZE 40 A1CZE N7 N6 N 0 1 N N N N N N 13.996 -3.941 27.281 4.630 1.391 -3.766 N7 A1CZE 41 A1CZE C29 C30 C 0 1 Y N N N N N 14.898 -3.547 25.048 3.839 0.937 -1.516 C29 A1CZE 42 A1CZE C31 C31 C 0 1 N N N N N N 16.265 -3.389 25.536 2.698 0.178 -1.929 C31 A1CZE 43 A1CZE N6 N7 N 0 1 N N N N N N 17.328 -3.265 25.923 1.792 -0.424 -2.257 N6 A1CZE 44 A1CZE H1 H1 H 0 1 N N N N N N 23.399 -8.985 19.854 -6.802 1.443 -0.832 H1 A1CZE 45 A1CZE H2 H2 H 0 1 N N N N N N 21.805 -8.252 20.242 -5.206 0.844 -1.391 H2 A1CZE 46 A1CZE H3 H3 H 0 1 N N N N N N 21.317 -10.516 20.723 -4.596 2.992 -2.306 H3 A1CZE 47 A1CZE H4 H4 H 0 1 N N N N N N 20.796 -9.392 22.748 -5.331 5.003 -1.202 H4 A1CZE 48 A1CZE H5 H5 H 0 1 N N N N N N 21.929 -10.646 23.358 -6.880 4.260 -0.699 H5 A1CZE 49 A1CZE H7 H7 H 0 1 N N N N N N 23.873 -9.016 24.900 -5.604 4.905 2.029 H7 A1CZE 50 A1CZE H8 H8 H 0 1 N N N N N N 24.156 -10.268 23.643 -7.043 4.203 1.230 H8 A1CZE 51 A1CZE H9 H9 H 0 1 N N N N N N 26.124 -8.934 23.397 -5.055 2.828 3.118 H9 A1CZE 52 A1CZE H10 H10 H 0 1 N N N N N N 25.256 -7.410 23.786 -6.849 2.786 3.160 H10 A1CZE 53 A1CZE H11 H11 H 0 1 N N N N N N 25.118 -9.097 21.226 -5.491 0.742 1.986 H11 A1CZE 54 A1CZE H12 H12 H 0 1 N N N N N N 25.295 -7.317 21.388 -6.974 1.381 1.204 H12 A1CZE 55 A1CZE H13 H13 H 0 1 N N N N N N 23.355 -6.078 22.723 -3.090 2.037 -0.370 H13 A1CZE 56 A1CZE H14 H14 H 0 1 N N N N N N 23.268 -6.079 20.929 -3.237 1.992 1.403 H14 A1CZE 57 A1CZE H15 H15 H 0 1 N N N N N N 20.678 -0.692 21.657 0.415 -3.695 -0.894 H15 A1CZE 58 A1CZE H16 H16 H 0 1 N N N N N N 23.050 -0.307 20.324 -1.438 -3.055 -2.292 H16 A1CZE 59 A1CZE H17 H17 H 0 1 N N N N N N 22.025 -1.746 20.001 -1.502 -4.826 -2.548 H17 A1CZE 60 A1CZE H18 H18 H 0 1 N N N N N N 23.689 -3.097 20.852 -3.464 -3.139 -1.202 H18 A1CZE 61 A1CZE H19 H19 H 0 1 N N N N N N 24.685 -1.652 21.237 -3.529 -4.910 -1.459 H19 A1CZE 62 A1CZE H20 H20 H 0 1 N N N N N N 23.613 -3.249 23.228 -3.280 -3.839 1.083 H20 A1CZE 63 A1CZE H21 H21 H 0 1 N N N N N N 23.581 -1.139 24.655 -1.977 -6.017 1.593 H21 A1CZE 64 A1CZE H22 H22 H 0 1 N N N N N N 25.066 -1.280 23.654 -3.435 -6.280 0.603 H22 A1CZE 65 A1CZE H23 H23 H 0 1 N N N N N N 24.244 0.280 22.198 -2.092 -6.364 -1.330 H23 A1CZE 66 A1CZE H25 H25 H 0 1 N N N N N N 22.184 1.260 22.029 0.249 -6.128 -1.379 H25 A1CZE 67 A1CZE H26 H26 H 0 1 N N N N N N 21.703 0.554 23.609 0.257 -5.924 0.391 H26 A1CZE 68 A1CZE H27 H27 H 0 1 N N N N N N 19.363 -1.029 23.073 1.292 -3.290 0.749 H27 A1CZE 69 A1CZE H28 H28 H 0 1 N N N N N N 15.263 -2.967 20.451 3.411 0.792 3.191 H28 A1CZE 70 A1CZE H29 H29 H 0 1 N N N N N N 12.827 -3.273 20.252 5.456 2.140 3.415 H29 A1CZE 71 A1CZE H30 H30 H 0 1 N N N N N N 13.103 -4.139 27.685 5.299 1.810 -4.329 H30 A1CZE 72 A1CZE H31 H31 H 0 1 N N N N N N 14.628 -4.689 27.486 3.896 0.901 -4.167 H31 A1CZE 73 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1CZE C15 C16 SING N N 1 A1CZE C15 C11 SING N N 2 A1CZE C23 C22 SING N N 3 A1CZE C23 C18 SING N N 4 A1CZE C27 C28 DOUB Y N 5 A1CZE C27 C26 SING Y N 6 A1CZE C16 F2 SING N N 7 A1CZE C16 C17 SING N N 8 A1CZE C28 C9 SING Y N 9 A1CZE C22 C21 SING N N 10 A1CZE C14 C11 SING N N 11 A1CZE C14 C13 SING N N 12 A1CZE C11 C10 SING N N 13 A1CZE C11 N4 SING N N 14 A1CZE C10 O1 SING N N 15 A1CZE O1 C1 SING N N 16 A1CZE C18 C19 SING N N 17 A1CZE C18 N3 SING N N 18 A1CZE F1 C5 SING N N 19 A1CZE N2 C1 DOUB Y N 20 A1CZE N2 C2 SING Y N 21 A1CZE C1 N1 SING Y N 22 A1CZE F3 C26 SING N N 23 A1CZE C5 C2 DOUB Y N 24 A1CZE C5 C6 SING Y N 25 A1CZE C26 C25 DOUB Y N 26 A1CZE C2 C3 SING Y N 27 A1CZE N1 C4 DOUB Y N 28 A1CZE C9 C6 SING N N 29 A1CZE C9 C24 DOUB Y N 30 A1CZE C6 C7 DOUB Y N 31 A1CZE C3 C4 SING Y N 32 A1CZE C3 C8 DOUB Y N 33 A1CZE C4 N3 SING N N 34 A1CZE C19 N5 SING N N 35 A1CZE C17 N4 SING N N 36 A1CZE N3 C21 SING N N 37 A1CZE C21 C20 SING N N 38 A1CZE C8 C7 SING Y N 39 A1CZE C7 CL1 SING N N 40 A1CZE N5 C20 SING N N 41 A1CZE N4 C12 SING N N 42 A1CZE C13 C12 SING N N 43 A1CZE C25 C24 SING Y N 44 A1CZE C25 S1 SING Y N 45 A1CZE C24 C29 SING Y N 46 A1CZE C29 C31 SING N N 47 A1CZE C29 C30 DOUB Y N 48 A1CZE S1 C30 SING Y N 49 A1CZE C31 N6 TRIP N N 50 A1CZE C30 N7 SING N N 51 A1CZE C15 H1 SING N N 52 A1CZE C15 H2 SING N N 53 A1CZE C16 H3 SING N N 54 A1CZE C17 H4 SING N N 55 A1CZE C17 H5 SING N N 56 A1CZE C12 H7 SING N N 57 A1CZE C12 H8 SING N N 58 A1CZE C13 H9 SING N N 59 A1CZE C13 H10 SING N N 60 A1CZE C14 H11 SING N N 61 A1CZE C14 H12 SING N N 62 A1CZE C10 H13 SING N N 63 A1CZE C10 H14 SING N N 64 A1CZE C18 H15 SING N N 65 A1CZE C23 H16 SING N N 66 A1CZE C23 H17 SING N N 67 A1CZE C22 H18 SING N N 68 A1CZE C22 H19 SING N N 69 A1CZE C21 H20 SING N N 70 A1CZE C20 H21 SING N N 71 A1CZE C20 H22 SING N N 72 A1CZE N5 H23 SING N N 73 A1CZE C19 H25 SING N N 74 A1CZE C19 H26 SING N N 75 A1CZE C8 H27 SING N N 76 A1CZE C28 H28 SING N N 77 A1CZE C27 H29 SING N N 78 A1CZE N7 H30 SING N N 79 A1CZE N7 H31 SING N N 80 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1CZE SMILES ACDLabs 14.52 "FC1CC2(CCCN2C1)COc1nc2c(F)c(c3ccc(F)c4sc(N)c(C#N)c34)c(Cl)cc2c(n1)N1C2CCC1CNC2" A1CZE InChI InChI 1.06 "InChI=1S/C31H29ClF3N7OS/c32-21-8-19-26(25(35)24(21)18-4-5-22(34)27-23(18)20(10-36)28(37)44-27)39-30(40-29(19)42-16-2-3-17(42)12-38-11-16)43-14-31-6-1-7-41(31)13-15(33)9-31/h4-5,8,15-17,38H,1-3,6-7,9,11-14,37H2/t15-,16-,17+,31+/m1/s1" A1CZE InChIKey InChI 1.06 MNAOSCAPYBYMQV-QHXZRSOMSA-N A1CZE SMILES_CANONICAL CACTVS 3.385 "Nc1sc2c(F)ccc(c3c(Cl)cc4c(nc(OC[C@@]56CCCN5C[C@H](F)C6)nc4c3F)N7[C@@H]8CC[C@H]7CNC8)c2c1C#N" A1CZE SMILES CACTVS 3.385 "Nc1sc2c(F)ccc(c3c(Cl)cc4c(nc(OC[C]56CCCN5C[CH](F)C6)nc4c3F)N7[CH]8CC[CH]7CNC8)c2c1C#N" A1CZE SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1cc(c2c(c1c3c(cc4c(c3F)nc(nc4N5[C@@H]6CC[C@H]5CNC6)OC[C@@]78CCCN7C[C@@H](C8)F)Cl)c(c(s2)N)C#N)F" A1CZE SMILES "OpenEye OEToolkits" 3.1.0.0 "c1cc(c2c(c1c3c(cc4c(c3F)nc(nc4N5C6CCC5CNC6)OCC78CCCN7CC(C8)F)Cl)c(c(s2)N)C#N)F" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1CZE "SYSTEMATIC NAME" ACDLabs 14.52 "(4M)-2-amino-4-(6-chloro-4-[(1R,5S)-3,8-diazabicyclo[3.2.1]octan-8-yl]-8-fluoro-2-{[(2R,4R,7aS)-2-fluorotetrahydro-1H-pyrrolizin-7a(5H)-yl]methoxy}quinazolin-7-yl)-7-fluoro-1-benzothiophene-3-carbonitrile" A1CZE "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "2-azanyl-4-[6-chloranyl-4-[(1~{R},5~{S})-3,8-diazabicyclo[3.2.1]octan-8-yl]-8-fluoranyl-2-[[(2~{R},8~{S})-2-fluoranyl-1,2,3,5,6,7-hexahydropyrrolizin-8-yl]methoxy]quinazolin-7-yl]-7-fluoranyl-1-benzothiophene-3-carbonitrile" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1CZE "Create component" 2025-10-28 RCSB A1CZE "Initial release" 2026-07-22 RCSB #