data_A1D07 # _chem_comp.id A1D07 _chem_comp.name "4-[(3S)-3-(fluoromethyl)piperidin-1-yl]-7H-pyrrolo[2,3-d]pyrimidine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H15 F N4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2026-09-01 _chem_comp.pdbx_modified_date 2026-10-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 234.273 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1D07 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 15IB _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? _chem_comp.pdbx_comp_type ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1D07 C11 C1 C 0 1 Y N N N N N -46.540 -29.158 4.725 -1.989 0.280 0.172 C11 A1D07 1 A1D07 C12 C2 C 0 1 N N N N N N -44.076 -30.560 2.510 1.543 -0.744 0.032 C12 A1D07 2 A1D07 C1 C3 C 0 1 N N N N N N -44.429 -32.859 1.558 4.024 -1.021 0.145 C1 A1D07 3 A1D07 C10 C4 C 0 1 Y N N N N N -47.918 -28.924 4.364 -2.345 1.673 0.440 C10 A1D07 4 A1D07 C2 C5 C 0 1 N N S N N N -44.096 -31.398 1.220 2.866 -0.040 0.338 C2 A1D07 5 A1D07 C3 C6 C 0 1 N N N N N N -45.036 -30.844 0.141 3.039 1.148 -0.613 C3 A1D07 6 A1D07 C4 C7 C 0 1 N N N N N N -46.396 -30.401 0.677 1.845 2.094 -0.457 C4 A1D07 7 A1D07 C5 C8 C 0 1 N N N N N N -46.371 -29.590 1.966 0.552 1.328 -0.740 C5 A1D07 8 A1D07 C6 C9 C 0 1 Y N N N N N -45.291 -29.400 4.077 -0.787 -0.434 0.054 C6 A1D07 9 A1D07 C7 C10 C 0 1 Y N N N N N -44.273 -29.486 6.177 -2.013 -2.350 -0.334 C7 A1D07 10 A1D07 C8 C11 C 0 1 Y N N N N N -46.470 -29.098 6.142 -3.204 -0.413 0.019 C8 A1D07 11 A1D07 C9 C12 C 0 1 Y N N N N N -48.620 -28.745 5.532 -3.686 1.739 0.434 C9 A1D07 12 A1D07 F1 F1 F 0 1 N N N N N N -43.569 -33.333 2.461 5.222 -0.411 0.534 F1 A1D07 13 A1D07 N1 N1 N 0 1 N N N N N N -45.102 -29.519 2.689 0.433 0.203 0.196 N1 A1D07 14 A1D07 N2 N2 N 0 1 Y N N N N N -44.181 -29.564 4.849 -0.850 -1.738 -0.198 N2 A1D07 15 A1D07 N3 N3 N 0 1 Y N N N N N -45.362 -29.262 6.907 -3.164 -1.720 -0.235 N3 A1D07 16 A1D07 N4 N4 N 0 1 Y N N N N N -47.743 -28.853 6.597 -4.212 0.498 0.184 N4 A1D07 17 A1D07 H14 H1 H 0 1 N N N N N N -44.173 -31.260 3.353 1.557 -1.113 -0.994 H14 A1D07 18 A1D07 H15 H2 H 0 1 N N N N N N -43.096 -30.062 2.558 1.410 -1.582 0.717 H15 A1D07 19 A1D07 H2 H3 H 0 1 N N N N N N -45.449 -32.914 1.965 3.853 -1.908 0.755 H2 A1D07 20 A1D07 H1 H4 H 0 1 N N N N N N -44.366 -33.467 0.643 4.087 -1.308 -0.905 H1 A1D07 21 A1D07 H13 H5 H 0 1 N N N N N N -48.322 -28.895 3.363 -1.660 2.491 0.610 H13 A1D07 22 A1D07 H3 H6 H 0 1 N N N N N N -43.077 -31.383 0.805 2.859 0.317 1.368 H3 A1D07 23 A1D07 H4 H7 H 0 1 N N N N N N -45.199 -31.628 -0.613 3.959 1.679 -0.370 H4 A1D07 24 A1D07 H5 H8 H 0 1 N N N N N N -44.550 -29.977 -0.331 3.085 0.787 -1.641 H5 A1D07 25 A1D07 H6 H9 H 0 1 N N N N N N -46.880 -29.788 -0.098 1.822 2.485 0.560 H6 A1D07 26 A1D07 H7 H10 H 0 1 N N N N N N -46.997 -31.304 0.859 1.941 2.920 -1.162 H7 A1D07 27 A1D07 H9 H11 H 0 1 N N N N N N -46.666 -28.561 1.715 -0.301 1.995 -0.616 H9 A1D07 28 A1D07 H8 H12 H 0 1 N N N N N N -47.115 -30.029 2.647 0.570 0.949 -1.762 H8 A1D07 29 A1D07 H10 H13 H 0 1 N N N N N N -43.353 -29.621 6.726 -2.019 -3.409 -0.542 H10 A1D07 30 A1D07 H12 H14 H 0 1 N N N N N N -49.680 -28.552 5.606 -4.264 2.636 0.601 H12 A1D07 31 A1D07 H11 H15 H 0 1 N N N N N N -47.999 -28.765 7.560 -5.159 0.295 0.131 H11 A1D07 32 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1D07 C3 C4 SING N N 1 A1D07 C3 C2 SING N N 2 A1D07 C4 C5 SING N N 3 A1D07 C2 C1 SING N N 4 A1D07 C2 C12 SING N N 5 A1D07 C1 F1 SING N N 6 A1D07 C5 N1 SING N N 7 A1D07 C12 N1 SING N N 8 A1D07 N1 C6 SING N N 9 A1D07 C6 C11 DOUB Y N 10 A1D07 C6 N2 SING Y N 11 A1D07 C10 C11 SING Y N 12 A1D07 C10 C9 DOUB Y N 13 A1D07 C11 C8 SING Y N 14 A1D07 N2 C7 DOUB Y N 15 A1D07 C9 N4 SING Y N 16 A1D07 C8 N4 SING Y N 17 A1D07 C8 N3 DOUB Y N 18 A1D07 C7 N3 SING Y N 19 A1D07 C12 H14 SING N N 20 A1D07 C12 H15 SING N N 21 A1D07 C1 H2 SING N N 22 A1D07 C1 H1 SING N N 23 A1D07 C10 H13 SING N N 24 A1D07 C2 H3 SING N N 25 A1D07 C3 H4 SING N N 26 A1D07 C3 H5 SING N N 27 A1D07 C4 H6 SING N N 28 A1D07 C4 H7 SING N N 29 A1D07 C5 H9 SING N N 30 A1D07 C5 H8 SING N N 31 A1D07 C7 H10 SING N N 32 A1D07 C9 H12 SING N N 33 A1D07 N4 H11 SING N N 34 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1D07 SMILES ACDLabs 14.52 "FCC1CCCN(C1)c1ncnc2[NH]ccc12" A1D07 InChI InChI 1.06 "InChI=1S/C12H15FN4/c13-6-9-2-1-5-17(7-9)12-10-3-4-14-11(10)15-8-16-12/h3-4,8-9H,1-2,5-7H2,(H,14,15,16)/t9-/m1/s1" A1D07 InChIKey InChI 1.06 UBBQEPSSOUOOQV-SECBINFHSA-N A1D07 SMILES_CANONICAL CACTVS 3.385 "FC[C@H]1CCCN(C1)c2ncnc3[nH]ccc23" A1D07 SMILES CACTVS 3.385 "FC[CH]1CCCN(C1)c2ncnc3[nH]ccc23" A1D07 SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1c[nH]c2c1c(ncn2)N3CCC[C@@H](C3)CF" A1D07 SMILES "OpenEye OEToolkits" 3.1.0.0 "c1c[nH]c2c1c(ncn2)N3CCCC(C3)CF" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1D07 "SYSTEMATIC NAME" ACDLabs 14.52 "4-[(3S)-3-(fluoromethyl)piperidin-1-yl]-7H-pyrrolo[2,3-d]pyrimidine" A1D07 "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "4-[(3~{S})-3-(fluoranylmethyl)piperidin-1-yl]-7~{H}-pyrrolo[2,3-d]pyrimidine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1D07 "Create component" 2026-09-01 RCSB A1D07 "Initial release" 2026-11-04 RCSB #