data_A1D08 # _chem_comp.id A1D08 _chem_comp.name "N-{[(1S,2R)-2-(hydroxymethyl)cyclopropyl]methyl}-7H-pyrrolo[2,3-d]pyrimidine-4-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H14 N4 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2026-09-01 _chem_comp.pdbx_modified_date 2026-10-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 246.265 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1D08 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 15IC _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? _chem_comp.pdbx_comp_type ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1D08 C11 C1 C 0 1 N N R N N N -44.648 -25.972 0.319 4.757 0.590 -0.188 C11 A1D08 1 A1D08 C12 C2 C 0 1 N N N N N N -45.830 -26.590 -0.400 5.047 -0.912 -0.172 C12 A1D08 2 A1D08 C1 C3 C 0 1 N N N N N N -45.048 -29.056 2.691 -0.199 -0.246 0.001 C1 A1D08 3 A1D08 C10 C4 C 0 1 N N N N N N -43.314 -25.972 -0.372 4.217 1.220 1.097 C10 A1D08 4 A1D08 C2 C5 C 0 1 Y N N N N N -45.229 -29.292 4.157 -1.547 0.365 -0.051 C2 A1D08 5 A1D08 C3 C6 C 0 1 Y N N N N N -44.314 -29.617 6.258 -2.893 2.232 -0.203 C3 A1D08 6 A1D08 C4 C7 C 0 1 Y N N N N N -46.531 -29.354 6.165 -3.965 0.206 -0.038 C4 A1D08 7 A1D08 C5 C8 C 0 1 Y N N N N N -46.516 -29.193 4.759 -2.701 -0.430 0.016 C5 A1D08 8 A1D08 C6 C9 C 0 1 Y N N N N N -47.875 -28.977 4.336 -2.970 -1.858 0.136 C6 A1D08 9 A1D08 C7 C10 C 0 1 Y N N N N N -48.661 -29.026 5.462 -4.308 -2.003 0.148 C7 A1D08 10 A1D08 C8 C11 C 0 1 N N N N N N -43.435 -28.288 0.988 2.231 -0.070 -0.014 C8 A1D08 11 A1D08 C9 C12 C 0 1 N N S N N N -43.487 -26.758 0.913 3.293 1.028 -0.106 C9 A1D08 12 A1D08 N1 N1 N 0 1 Y N N N N N -44.144 -29.475 4.943 -1.696 1.684 -0.157 N1 A1D08 13 A1D08 N2 N2 N 0 1 Y N N N N N -45.451 -29.570 6.955 -4.005 1.526 -0.149 N2 A1D08 14 A1D08 N3 N3 N 0 1 Y N N N N N -47.843 -29.252 6.562 -4.912 -0.780 0.045 N3 A1D08 15 A1D08 N4 N4 N 0 1 N N N N N N -43.803 -28.683 2.336 0.898 0.534 -0.065 N4 A1D08 16 A1D08 O1 O1 O 0 1 N N N N N N -45.995 -29.114 1.905 -0.082 -1.452 0.102 O1 A1D08 17 A1D08 O2 O2 O 0 1 N N N N N N -46.840 -26.939 0.520 6.445 -1.129 -0.372 O2 A1D08 18 A1D08 H11 H1 H 0 1 N N N N N N -44.883 -25.041 0.857 5.429 1.192 -0.800 H11 A1D08 19 A1D08 H12 H2 H 0 1 N N N N N N -46.233 -25.865 -1.123 4.748 -1.329 0.790 H12 A1D08 20 A1D08 H13 H3 H 0 1 N N N N N N -45.498 -27.493 -0.933 4.486 -1.399 -0.969 H13 A1D08 21 A1D08 H10 H4 H 0 1 N N N N N N -43.191 -26.503 -1.327 4.069 0.564 1.955 H10 A1D08 22 A1D08 H9 H5 H 0 1 N N N N N N -42.700 -25.060 -0.378 4.534 2.236 1.332 H9 A1D08 23 A1D08 H1 H6 H 0 1 N N N N N N -43.416 -29.793 6.833 -2.967 3.305 -0.293 H1 A1D08 24 A1D08 H2 H7 H 0 1 N N N N N N -48.213 -28.808 3.324 -2.237 -2.648 0.203 H2 A1D08 25 A1D08 H3 H8 H 0 1 N N N N N N -49.734 -28.909 5.488 -4.828 -2.947 0.227 H3 A1D08 26 A1D08 H7 H9 H 0 1 N N N N N N -44.142 -28.722 0.266 2.349 -0.761 -0.849 H7 A1D08 27 A1D08 H6 H10 H 0 1 N N N N N N -42.417 -28.639 0.761 2.349 -0.611 0.924 H6 A1D08 28 A1D08 H8 H11 H 0 1 N N N N N N -43.034 -26.268 1.788 3.002 1.918 -0.664 H8 A1D08 29 A1D08 H4 H12 H 0 1 N N N N N N -48.163 -29.329 7.506 -5.871 -0.632 0.032 H4 A1D08 30 A1D08 H5 H13 H 0 1 N N N N N N -43.093 -28.678 3.040 0.804 1.496 -0.146 H5 A1D08 31 A1D08 H14 H14 H 0 1 N N N N N N -46.566 -27.700 1.018 6.702 -2.061 -0.374 H14 A1D08 32 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1D08 C12 C11 SING N N 1 A1D08 C12 O2 SING N N 2 A1D08 C10 C11 SING N N 3 A1D08 C10 C9 SING N N 4 A1D08 C11 C9 SING N N 5 A1D08 C9 C8 SING N N 6 A1D08 C8 N4 SING N N 7 A1D08 O1 C1 DOUB N N 8 A1D08 N4 C1 SING N N 9 A1D08 C1 C2 SING N N 10 A1D08 C2 C5 DOUB Y N 11 A1D08 C2 N1 SING Y N 12 A1D08 C6 C5 SING Y N 13 A1D08 C6 C7 DOUB Y N 14 A1D08 C5 C4 SING Y N 15 A1D08 N1 C3 DOUB Y N 16 A1D08 C7 N3 SING Y N 17 A1D08 C4 N3 SING Y N 18 A1D08 C4 N2 DOUB Y N 19 A1D08 C3 N2 SING Y N 20 A1D08 C11 H11 SING N N 21 A1D08 C12 H12 SING N N 22 A1D08 C12 H13 SING N N 23 A1D08 C10 H10 SING N N 24 A1D08 C10 H9 SING N N 25 A1D08 C3 H1 SING N N 26 A1D08 C6 H2 SING N N 27 A1D08 C7 H3 SING N N 28 A1D08 C8 H7 SING N N 29 A1D08 C8 H6 SING N N 30 A1D08 C9 H8 SING N N 31 A1D08 N3 H4 SING N N 32 A1D08 N4 H5 SING N N 33 A1D08 O2 H14 SING N N 34 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1D08 SMILES ACDLabs 14.52 "OCC1CC1CNC(=O)c1ncnc2[NH]ccc12" A1D08 InChI InChI 1.06 "InChI=1S/C12H14N4O2/c17-5-8-3-7(8)4-14-12(18)10-9-1-2-13-11(9)16-6-15-10/h1-2,6-8,17H,3-5H2,(H,14,18)(H,13,15,16)/t7-,8+/m1/s1" A1D08 InChIKey InChI 1.06 VOGDBADQQUQXBC-SFYZADRCSA-N A1D08 SMILES_CANONICAL CACTVS 3.385 "OC[C@@H]1C[C@@H]1CNC(=O)c2ncnc3[nH]ccc23" A1D08 SMILES CACTVS 3.385 "OC[CH]1C[CH]1CNC(=O)c2ncnc3[nH]ccc23" A1D08 SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1c[nH]c2c1c(ncn2)C(=O)NC[C@H]3C[C@H]3CO" A1D08 SMILES "OpenEye OEToolkits" 3.1.0.0 "c1c[nH]c2c1c(ncn2)C(=O)NCC3CC3CO" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1D08 "SYSTEMATIC NAME" ACDLabs 14.52 "N-{[(1S,2R)-2-(hydroxymethyl)cyclopropyl]methyl}-7H-pyrrolo[2,3-d]pyrimidine-4-carboxamide" A1D08 "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "~{N}-[[(1~{S},2~{R})-2-(hydroxymethyl)cyclopropyl]methyl]-7~{H}-pyrrolo[2,3-d]pyrimidine-4-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1D08 "Create component" 2026-09-01 RCSB A1D08 "Initial release" 2026-11-04 RCSB #