data_A1D0D # _chem_comp.id A1D0D _chem_comp.name "~{N}-[(1~{R},3~{S})-3-oxidanylcyclopentyl]-1$l^{4},7,9-triazabicyclo[4.3.0]nona-1(6),2,4,8-tetraene-2-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H14 N4 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2026-08-28 _chem_comp.pdbx_modified_date 2026-10-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 246.265 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1D0D _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 15GD _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? _chem_comp.pdbx_comp_type ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1D0D C11 C1 C 0 1 Y N N N N N -46.437 -29.077 6.371 3.315 0.815 -0.097 C11 A1D0D 1 A1D0D C12 C2 C 0 1 Y N N N N N -44.366 -29.436 6.159 2.141 2.639 -0.113 C12 A1D0D 2 A1D0D C1 C3 C 0 1 N N N N N N -46.695 -29.416 2.565 0.215 -1.222 0.192 C1 A1D0D 3 A1D0D C10 C4 C 0 1 Y N N N N N -47.792 -28.820 6.711 4.310 -0.181 -0.110 C10 A1D0D 4 A1D0D C2 C5 C 0 1 N N R N N N -45.156 -30.644 1.034 -2.145 -0.625 0.301 C2 A1D0D 5 A1D0D C3 C6 C 0 1 N N N N N N -45.331 -32.139 0.731 -2.774 -0.808 -1.102 C3 A1D0D 6 A1D0D C4 C7 C 0 1 N N N N N N -44.127 -32.824 1.381 -4.281 -0.571 -0.875 C4 A1D0D 7 A1D0D C5 C8 C 0 1 N N S N N N -43.051 -31.748 1.552 -4.405 0.289 0.395 C5 A1D0D 8 A1D0D C6 C9 C 0 1 N N N N N N -43.638 -30.428 1.047 -2.968 0.545 0.895 C6 A1D0D 9 A1D0D C7 C10 C 0 1 Y N N N N N -47.063 -29.213 4.013 1.637 -0.857 0.083 C7 A1D0D 10 A1D0D C8 C11 C 0 1 Y N N N N N -48.376 -28.958 4.368 2.602 -1.841 0.084 C8 A1D0D 11 A1D0D C9 C12 C 0 1 Y N N N N N -48.743 -28.762 5.722 3.952 -1.493 -0.021 C9 A1D0D 12 A1D0D N1 N1 N 0 1 N N N N N N -45.696 -30.284 2.337 -0.730 -0.261 0.192 N1 A1D0D 13 A1D0D N2 N2 N 0 1 Y N N N N N -45.326 -29.189 7.090 3.366 2.141 -0.167 N2 A1D0D 14 A1D0D N3 N3 N 0 1 Y N N N N N -44.775 -29.494 4.899 1.270 1.659 -0.023 N3 A1D0D 15 A1D0D N4 N4 N 0 1 Y N N N N N -46.119 -29.267 5.012 2.000 0.462 -0.001 N4 A1D0D 16 A1D0D O1 O1 O 0 1 N N N N N N -47.289 -28.823 1.666 -0.107 -2.392 0.283 O1 A1D0D 17 A1D0D O2 O2 O 0 1 N N N N N N -42.656 -31.631 2.902 -5.044 1.529 0.086 O2 A1D0D 18 A1D0D H14 H1 H 0 1 N N N N N N -43.330 -29.577 6.430 1.894 3.690 -0.150 H14 A1D0D 19 A1D0D H13 H2 H 0 1 N N N N N N -48.073 -28.671 7.743 5.351 0.093 -0.191 H13 A1D0D 20 A1D0D H2 H3 H 0 1 N N N N N N -45.615 -30.043 0.235 -2.265 -1.526 0.902 H2 A1D0D 21 A1D0D H4 H4 H 0 1 N N N N N N -46.269 -32.514 1.166 -2.373 -0.071 -1.799 H4 A1D0D 22 A1D0D H3 H5 H 0 1 N N N N N N -45.335 -32.315 -0.355 -2.597 -1.818 -1.471 H3 A1D0D 23 A1D0D H6 H6 H 0 1 N N N N N N -44.409 -33.238 2.360 -4.709 -0.043 -1.727 H6 A1D0D 24 A1D0D H5 H7 H 0 1 N N N N N N -43.756 -33.633 0.734 -4.791 -1.524 -0.732 H5 A1D0D 25 A1D0D H7 H8 H 0 1 N N N N N N -42.187 -32.012 0.924 -4.975 -0.246 1.154 H7 A1D0D 26 A1D0D H10 H9 H 0 1 N N N N N N -43.271 -30.205 0.034 -2.933 0.522 1.984 H10 A1D0D 27 A1D0D H9 H10 H 0 1 N N N N N N -43.371 -29.603 1.724 -2.599 1.500 0.521 H9 A1D0D 28 A1D0D H11 H11 H 0 1 N N N N N N -49.134 -28.908 3.600 2.315 -2.879 0.165 H11 A1D0D 29 A1D0D H12 H12 H 0 1 N N N N N N -49.774 -28.566 5.977 4.710 -2.263 -0.031 H12 A1D0D 30 A1D0D H1 H13 H 0 1 N N N N N N -45.285 -30.723 3.136 -0.473 0.671 0.120 H1 A1D0D 31 A1D0D H8 H15 H 0 1 N N N N N N -42.294 -32.458 3.199 -5.944 1.433 -0.254 H8 A1D0D 32 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1D0D C3 C2 SING N N 1 A1D0D C3 C4 SING N N 2 A1D0D C2 C6 SING N N 3 A1D0D C2 N1 SING N N 4 A1D0D C6 C5 SING N N 5 A1D0D C4 C5 SING N N 6 A1D0D C5 O2 SING N N 7 A1D0D O1 C1 DOUB N N 8 A1D0D N1 C1 SING N N 9 A1D0D C1 C7 SING N N 10 A1D0D C7 C8 DOUB Y N 11 A1D0D C7 N4 SING Y N 12 A1D0D C8 C9 SING Y N 13 A1D0D N3 N4 SING Y N 14 A1D0D N3 C12 DOUB Y N 15 A1D0D N4 C11 SING Y N 16 A1D0D C9 C10 DOUB Y N 17 A1D0D C12 N2 SING Y N 18 A1D0D C11 C10 SING Y N 19 A1D0D C11 N2 DOUB Y N 20 A1D0D C12 H14 SING N N 21 A1D0D C10 H13 SING N N 22 A1D0D C2 H2 SING N N 23 A1D0D C3 H4 SING N N 24 A1D0D C3 H3 SING N N 25 A1D0D C4 H6 SING N N 26 A1D0D C4 H5 SING N N 27 A1D0D C5 H7 SING N N 28 A1D0D C6 H10 SING N N 29 A1D0D C6 H9 SING N N 30 A1D0D C8 H11 SING N N 31 A1D0D C9 H12 SING N N 32 A1D0D N1 H1 SING N N 33 A1D0D O2 H8 SING N N 34 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1D0D SMILES ACDLabs 14.52 "OC1CCC(C1)NC(=O)c1cccc2ncnn12" A1D0D InChI InChI 1.06 "InChI=1S/C12H14N4O2/c17-9-5-4-8(6-9)15-12(18)10-2-1-3-11-13-7-14-16(10)11/h1-3,7-9,17H,4-6H2,(H,15,18)/t8-,9+/m1/s1" A1D0D InChIKey InChI 1.06 KTOXDZKHNDXTIO-BDAKNGLRSA-N A1D0D SMILES_CANONICAL CACTVS 3.385 "O[C@H]1CC[C@H](C1)NC(=O)c2cccc3ncnn23" A1D0D SMILES CACTVS 3.385 "O[CH]1CC[CH](C1)NC(=O)c2cccc3ncnn23" A1D0D SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1cc(n2c(c1)ncn2)C(=O)N[C@@H]3CC[C@@H](C3)O" A1D0D SMILES "OpenEye OEToolkits" 3.1.0.0 "c1cc(n2c(c1)ncn2)C(=O)NC3CCC(C3)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1D0D "SYSTEMATIC NAME" ACDLabs 14.52 "(4R)-N-[(1R,3S)-3-hydroxycyclopentyl][1,2,4]triazolo[1,5-a]pyridine-5-carboxamide" A1D0D "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "~{N}-[(1~{R},3~{S})-3-oxidanylcyclopentyl]-[1,2,4]triazolo[1,5-a]pyridine-5-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1D0D "Create component" 2026-08-28 RCSB A1D0D "Initial release" 2026-11-04 RCSB #