data_A1D0E # _chem_comp.id A1D0E _chem_comp.name "4-[(2S)-2-(methoxymethyl)pyrrolidin-1-yl]-7H-pyrrolo[2,3-d]pyrimidine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H16 N4 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2026-08-28 _chem_comp.pdbx_modified_date 2026-10-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 232.282 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1D0E _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 15GG _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? _chem_comp.pdbx_comp_type ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1D0E C11 C1 C 0 1 Y N N N N N -48.041 -28.961 4.359 2.024 1.493 -0.998 C11 A1D0E 1 A1D0E C12 C2 C 0 1 Y N N N N N -46.626 -29.116 4.573 1.668 0.288 -0.251 C12 A1D0E 2 A1D0E C1 C3 C 0 1 N N N N N N -43.310 -26.293 0.281 -3.897 -1.004 -2.187 C1 A1D0E 3 A1D0E C10 C4 C 0 1 Y N N N N N -48.626 -28.839 5.599 3.342 1.423 -1.244 C10 A1D0E 4 A1D0E C2 C5 C 0 1 N N N N N N -43.386 -28.360 1.398 -2.547 -1.145 -0.211 C2 A1D0E 5 A1D0E C3 C6 C 0 1 N N S N N N -44.254 -29.612 1.608 -1.815 -0.287 0.823 C3 A1D0E 6 A1D0E C4 C7 C 0 1 N N N N N N -44.758 -30.197 0.284 -2.778 0.762 1.410 C4 A1D0E 7 A1D0E C5 C8 C 0 1 N N N N N N -46.103 -30.806 0.652 -2.137 2.129 1.080 C5 A1D0E 8 A1D0E C6 C9 C 0 1 N N N N N N -46.647 -29.856 1.715 -0.646 1.768 0.861 C6 A1D0E 9 A1D0E C7 C10 C 0 1 Y N N N N N -45.449 -29.283 3.787 0.484 -0.230 0.294 C7 A1D0E 10 A1D0E C8 C11 C 0 1 Y N N N N N -44.201 -29.331 5.748 1.680 -2.053 1.049 C8 A1D0E 11 A1D0E C9 C12 C 0 1 Y N N N N N -46.410 -29.090 5.972 2.859 -0.446 -0.100 C9 A1D0E 12 A1D0E N1 N1 N 0 1 N N N N N N -45.459 -29.335 2.386 -0.712 0.454 0.172 N1 A1D0E 13 A1D0E N2 N2 N 0 1 Y N N N N N -44.249 -29.363 4.418 0.540 -1.397 0.931 N2 A1D0E 14 A1D0E N3 N3 N 0 1 Y N N N N N -45.214 -29.203 6.604 2.813 -1.606 0.554 N3 A1D0E 15 A1D0E N4 N4 N 0 1 Y N N N N N -47.641 -28.931 6.564 3.853 0.267 -0.712 N4 A1D0E 16 A1D0E O1 O1 O 0 1 N N N N N N -44.103 -27.425 0.602 -3.181 -0.298 -1.171 O1 A1D0E 17 A1D0E H16 H1 H 0 1 N N N N N N -48.548 -28.944 3.406 1.354 2.286 -1.298 H16 A1D0E 18 A1D0E H1 H2 H 0 1 N N N N N N -43.898 -25.595 -0.333 -4.677 -1.610 -1.727 H1 A1D0E 19 A1D0E H2 H3 H 0 1 N N N N N N -42.996 -25.790 1.208 -4.349 -0.290 -2.875 H2 A1D0E 20 A1D0E H3 H4 H 0 1 N N N N N N -42.421 -26.616 -0.280 -3.209 -1.650 -2.733 H3 A1D0E 21 A1D0E H15 H5 H 0 1 N N N N N N -49.680 -28.695 5.787 3.914 2.165 -1.781 H15 A1D0E 22 A1D0E H4 H6 H 0 1 N N N N N N -42.453 -28.640 0.887 -1.832 -1.794 -0.716 H4 A1D0E 23 A1D0E H5 H7 H 0 1 N N N N N N -43.149 -27.909 2.373 -3.299 -1.754 0.290 H5 A1D0E 24 A1D0E H6 H8 H 0 1 N N N N N N -43.650 -30.375 2.122 -1.420 -0.919 1.617 H6 A1D0E 25 A1D0E H8 H9 H 0 1 N N N N N N -44.068 -30.966 -0.093 -3.758 0.680 0.940 H8 A1D0E 26 A1D0E H7 H10 H 0 1 N N N N N N -44.878 -29.409 -0.474 -2.863 0.634 2.489 H7 A1D0E 27 A1D0E H9 H11 H 0 1 N N N N N N -46.770 -30.842 -0.222 -2.570 2.549 0.173 H9 A1D0E 28 A1D0E H10 H12 H 0 1 N N N N N N -45.977 -31.820 1.059 -2.247 2.819 1.917 H10 A1D0E 29 A1D0E H11 H13 H 0 1 N N N N N N -47.220 -29.040 1.250 -0.160 2.510 0.227 H11 A1D0E 30 A1D0E H12 H14 H 0 1 N N N N N N -47.289 -30.396 2.426 -0.127 1.677 1.815 H12 A1D0E 31 A1D0E H13 H15 H 0 1 N N N N N N -43.219 -29.420 6.188 1.682 -2.998 1.574 H13 A1D0E 32 A1D0E H14 H16 H 0 1 N N N N N N -47.800 -28.888 7.550 4.783 -0.005 -0.762 H14 A1D0E 33 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1D0E C1 O1 SING N N 1 A1D0E C4 C5 SING N N 2 A1D0E C4 C3 SING N N 3 A1D0E O1 C2 SING N N 4 A1D0E C5 C6 SING N N 5 A1D0E C2 C3 SING N N 6 A1D0E C3 N1 SING N N 7 A1D0E C6 N1 SING N N 8 A1D0E N1 C7 SING N N 9 A1D0E C7 N2 DOUB Y N 10 A1D0E C7 C12 SING Y N 11 A1D0E C11 C12 SING Y N 12 A1D0E C11 C10 DOUB Y N 13 A1D0E N2 C8 SING Y N 14 A1D0E C12 C9 DOUB Y N 15 A1D0E C10 N4 SING Y N 16 A1D0E C8 N3 DOUB Y N 17 A1D0E C9 N4 SING Y N 18 A1D0E C9 N3 SING Y N 19 A1D0E C11 H16 SING N N 20 A1D0E C1 H1 SING N N 21 A1D0E C1 H2 SING N N 22 A1D0E C1 H3 SING N N 23 A1D0E C10 H15 SING N N 24 A1D0E C2 H4 SING N N 25 A1D0E C2 H5 SING N N 26 A1D0E C3 H6 SING N N 27 A1D0E C4 H8 SING N N 28 A1D0E C4 H7 SING N N 29 A1D0E C5 H9 SING N N 30 A1D0E C5 H10 SING N N 31 A1D0E C6 H11 SING N N 32 A1D0E C6 H12 SING N N 33 A1D0E C8 H13 SING N N 34 A1D0E N4 H14 SING N N 35 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1D0E SMILES ACDLabs 14.52 "COCC1CCCN1c1ncnc2[NH]ccc12" A1D0E InChI InChI 1.06 "InChI=1S/C12H16N4O/c1-17-7-9-3-2-6-16(9)12-10-4-5-13-11(10)14-8-15-12/h4-5,8-9H,2-3,6-7H2,1H3,(H,13,14,15)/t9-/m0/s1" A1D0E InChIKey InChI 1.06 JPPGNVXNDFPPGJ-VIFPVBQESA-N A1D0E SMILES_CANONICAL CACTVS 3.385 "COC[C@@H]1CCCN1c2ncnc3[nH]ccc23" A1D0E SMILES CACTVS 3.385 "COC[CH]1CCCN1c2ncnc3[nH]ccc23" A1D0E SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "COC[C@@H]1CCCN1c2c3cc[nH]c3ncn2" A1D0E SMILES "OpenEye OEToolkits" 3.1.0.0 "COCC1CCCN1c2c3cc[nH]c3ncn2" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1D0E "SYSTEMATIC NAME" ACDLabs 14.52 "4-[(2S)-2-(methoxymethyl)pyrrolidin-1-yl]-7H-pyrrolo[2,3-d]pyrimidine" A1D0E "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "4-[(2~{S})-2-(methoxymethyl)pyrrolidin-1-yl]-7~{H}-pyrrolo[2,3-d]pyrimidine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1D0E "Create component" 2026-08-28 RCSB A1D0E "Initial release" 2026-11-04 RCSB #