data_A1D0Q # _chem_comp.id A1D0Q _chem_comp.name "N-[(2-oxo-1,2-dihydropyridin-3-yl)methyl]-7H-pyrrolo[2,3-d]pyrimidine-4-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C13 H11 N5 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2026-08-28 _chem_comp.pdbx_modified_date 2026-10-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 269.259 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1D0Q _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 15HL _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? _chem_comp.pdbx_comp_type ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1D0Q C13 C1 C 0 1 Y N N N N N -46.906 -29.132 4.884 -3.045 0.241 -0.031 C13 A1D0Q 1 A1D0Q C11 C2 C 0 1 Y N N N N N -48.855 -28.685 5.955 -5.026 1.311 0.039 C11 A1D0Q 2 A1D0Q C12 C3 C 0 1 Y N N N N N -48.320 -28.896 4.706 -3.702 1.543 -0.017 C12 A1D0Q 3 A1D0Q C1 C4 C 0 1 N N N N N N -45.856 -29.551 2.585 -0.592 0.758 -0.130 C1 A1D0Q 4 A1D0Q C10 C5 C 0 1 Y N N N N N -46.638 -29.043 6.277 -4.081 -0.723 0.019 C10 A1D0Q 5 A1D0Q C2 C6 C 0 1 N N N N N N -44.764 -30.616 0.610 1.790 1.263 -0.225 C2 A1D0Q 6 A1D0Q C3 C7 C 0 1 N N N N N N -45.338 -31.990 0.290 3.095 0.511 -0.264 C3 A1D0Q 7 A1D0Q C4 C8 C 0 1 N N N N N N -46.428 -32.454 0.946 3.700 0.242 -1.457 C4 A1D0Q 8 A1D0Q C5 C9 C 0 1 N N N N N N -46.992 -33.754 0.657 4.914 -0.459 -1.467 C5 A1D0Q 9 A1D0Q C6 C10 C 0 1 N N N N N N -46.407 -34.496 -0.293 5.472 -0.860 -0.301 C6 A1D0Q 10 A1D0Q C7 C11 C 0 1 N N N N N N -44.704 -32.817 -0.756 3.705 0.085 0.928 C7 A1D0Q 11 A1D0Q C8 C12 C 0 1 Y N N N N N -45.763 -29.408 4.075 -1.715 -0.205 -0.076 C8 A1D0Q 12 A1D0Q C9 C13 C 0 1 Y N N N N N -44.460 -29.452 5.996 -2.487 -2.378 -0.020 C9 A1D0Q 13 A1D0Q N1 N1 N 0 1 N N N N N N -44.898 -30.310 2.029 0.679 0.310 -0.171 N1 A1D0Q 14 A1D0Q N2 N2 N 0 1 N N N N N N -45.284 -34.022 -0.979 4.869 -0.591 0.885 N2 A1D0Q 15 A1D0Q N3 N3 N 0 1 Y N N N N N -44.550 -29.566 4.668 -1.491 -1.518 -0.068 N3 A1D0Q 16 A1D0Q N4 N4 N 0 1 Y N N N N N -45.428 -29.199 6.880 -3.751 -2.007 0.018 N4 A1D0Q 17 A1D0Q N5 N5 N 0 1 Y N N N N N -47.840 -28.771 6.893 -5.265 -0.036 0.061 N5 A1D0Q 18 A1D0Q O1 O1 O 0 1 N N N N N N -46.763 -29.023 1.945 -0.815 1.953 -0.136 O1 A1D0Q 19 A1D0Q O2 O2 O 0 1 N N N N N N -43.717 -32.471 -1.405 3.178 0.323 2.003 O2 A1D0Q 20 A1D0Q H10 H1 H 0 1 N N N N N N -49.895 -28.485 6.169 -5.788 2.076 0.063 H10 A1D0Q 21 A1D0Q H11 H2 H 0 1 N N N N N N -48.856 -28.887 3.768 -3.218 2.508 -0.045 H11 A1D0Q 22 A1D0Q H2 H3 H 0 1 N N N N N N -43.698 -30.599 0.338 1.765 1.901 0.659 H2 A1D0Q 23 A1D0Q H3 H4 H 0 1 N N N N N N -45.304 -29.856 0.026 1.698 1.879 -1.119 H3 A1D0Q 24 A1D0Q H4 H5 H 0 1 N N N N N N -46.888 -31.838 1.704 3.248 0.564 -2.383 H4 A1D0Q 25 A1D0Q H5 H6 H 0 1 N N N N N N -47.858 -34.116 1.191 5.403 -0.680 -2.405 H5 A1D0Q 26 A1D0Q H6 H7 H 0 1 N N N N N N -46.807 -35.470 -0.532 6.407 -1.400 -0.315 H6 A1D0Q 27 A1D0Q H8 H8 H 0 1 N N N N N N -43.471 -29.582 6.410 -2.259 -3.434 -0.020 H8 A1D0Q 28 A1D0Q H1 H9 H 0 1 N N N N N N -44.214 -30.701 2.645 0.857 -0.643 -0.167 H1 A1D0Q 29 A1D0Q H7 H10 H 0 1 N N N N N N -44.882 -34.611 -1.680 5.285 -0.883 1.711 H7 A1D0Q 30 A1D0Q H9 H11 H 0 1 N N N N N N -47.962 -28.652 7.878 -6.144 -0.445 0.100 H9 A1D0Q 31 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1D0Q O2 C7 DOUB N N 1 A1D0Q N2 C7 SING N N 2 A1D0Q N2 C6 SING N N 3 A1D0Q C7 C3 SING N N 4 A1D0Q C6 C5 DOUB N N 5 A1D0Q C3 C2 SING N N 6 A1D0Q C3 C4 DOUB N N 7 A1D0Q C2 N1 SING N N 8 A1D0Q C5 C4 SING N N 9 A1D0Q O1 C1 DOUB N N 10 A1D0Q N1 C1 SING N N 11 A1D0Q C1 C8 SING N N 12 A1D0Q C8 N3 DOUB Y N 13 A1D0Q C8 C13 SING Y N 14 A1D0Q N3 C9 SING Y N 15 A1D0Q C12 C13 SING Y N 16 A1D0Q C12 C11 DOUB Y N 17 A1D0Q C13 C10 DOUB Y N 18 A1D0Q C11 N5 SING Y N 19 A1D0Q C9 N4 DOUB Y N 20 A1D0Q C10 N4 SING Y N 21 A1D0Q C10 N5 SING Y N 22 A1D0Q C11 H10 SING N N 23 A1D0Q C12 H11 SING N N 24 A1D0Q C2 H2 SING N N 25 A1D0Q C2 H3 SING N N 26 A1D0Q C4 H4 SING N N 27 A1D0Q C5 H5 SING N N 28 A1D0Q C6 H6 SING N N 29 A1D0Q C9 H8 SING N N 30 A1D0Q N1 H1 SING N N 31 A1D0Q N2 H7 SING N N 32 A1D0Q N5 H9 SING N N 33 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1D0Q SMILES ACDLabs 14.52 "O=C1NC=CC=C1CNC(=O)c1ncnc2[NH]ccc21" A1D0Q InChI InChI 1.06 "InChI=1S/C13H11N5O2/c19-12-8(2-1-4-15-12)6-16-13(20)10-9-3-5-14-11(9)18-7-17-10/h1-5,7H,6H2,(H,15,19)(H,16,20)(H,14,17,18)" A1D0Q InChIKey InChI 1.06 ZNQPKGNPDVGJHD-UHFFFAOYSA-N A1D0Q SMILES_CANONICAL CACTVS 3.385 "O=C(NCC1=CC=CNC1=O)c2ncnc3[nH]ccc23" A1D0Q SMILES CACTVS 3.385 "O=C(NCC1=CC=CNC1=O)c2ncnc3[nH]ccc23" A1D0Q SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1c[nH]c2c1c(ncn2)C(=O)NCC3=CC=CNC3=O" A1D0Q SMILES "OpenEye OEToolkits" 3.1.0.0 "c1c[nH]c2c1c(ncn2)C(=O)NCC3=CC=CNC3=O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1D0Q "SYSTEMATIC NAME" ACDLabs 14.52 "N-[(2-oxo-1,2-dihydropyridin-3-yl)methyl]-7H-pyrrolo[2,3-d]pyrimidine-4-carboxamide" A1D0Q "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "~{N}-[(2-oxidanylidene-1~{H}-pyridin-3-yl)methyl]-7~{H}-pyrrolo[2,3-d]pyrimidine-4-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1D0Q "Create component" 2026-08-28 RCSB A1D0Q "Initial release" 2026-11-04 RCSB #