data_A1D16 # _chem_comp.id A1D16 _chem_comp.name "(2R)-1-[(2R)-1-(7H-pyrrolo[2,3-d]pyrimidin-4-yl)pyrrolidin-2-yl]propan-2-ol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C13 H18 N4 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2026-09-01 _chem_comp.pdbx_modified_date 2026-10-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 246.308 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1D16 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 15IY _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? _chem_comp.pdbx_comp_type ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1D16 C13 C1 C 0 1 Y N N N N N -46.945 -29.178 4.897 -1.747 -0.169 0.306 C13 A1D16 1 A1D16 C11 C2 C 0 1 Y N N N N N -48.860 -28.729 6.026 -3.621 -0.583 1.487 C11 A1D16 2 A1D16 C12 C3 C 0 1 Y N N N N N -48.364 -28.936 4.762 -2.335 -0.958 1.387 C12 A1D16 3 A1D16 C1 C4 C 0 1 N N N N N N -42.008 -31.478 1.360 3.481 1.793 1.862 C1 A1D16 4 A1D16 C10 C5 C 0 1 Y N N N N N -46.638 -29.089 6.285 -2.777 0.657 -0.182 C10 A1D16 5 A1D16 C2 C6 C 0 1 N N R N N N -43.072 -31.915 2.374 2.451 1.299 0.844 C2 A1D16 6 A1D16 C3 C7 C 0 1 N N N N N N -44.503 -31.544 1.937 2.882 -0.065 0.303 C3 A1D16 7 A1D16 C4 C8 C 0 1 N N R N N N -44.817 -30.032 1.786 1.793 -0.616 -0.620 C4 A1D16 8 A1D16 C5 C9 C 0 1 N N N N N N -45.245 -29.651 0.360 2.247 -1.960 -1.225 C5 A1D16 9 A1D16 C6 C10 C 0 1 N N N N N N -46.450 -28.724 0.504 1.575 -3.006 -0.297 C6 A1D16 10 A1D16 C7 C11 C 0 1 N N N N N N -47.003 -28.981 1.904 0.230 -2.313 0.034 C7 A1D16 11 A1D16 C8 C12 C 0 1 Y N N N N N -45.829 -29.459 4.050 -0.479 -0.086 -0.289 C8 A1D16 12 A1D16 C9 C13 C 0 1 Y N N N N N -44.476 -29.500 5.951 -1.301 1.529 -1.717 C9 A1D16 13 A1D16 N1 N1 N 0 1 N N N N N N -45.918 -29.601 2.647 0.565 -0.878 0.154 N1 A1D16 14 A1D16 N2 N2 N 0 1 Y N N N N N -44.612 -29.610 4.628 -0.306 0.772 -1.290 N2 A1D16 15 A1D16 N3 N3 N 0 1 Y N N N N N -45.415 -29.249 6.860 -2.504 1.488 -1.186 N3 A1D16 16 A1D16 N4 N4 N 0 1 Y N N N N N -47.821 -28.816 6.935 -3.897 0.382 0.553 N4 A1D16 17 A1D16 O1 O1 O 0 1 N N N N N N -42.778 -31.291 3.604 2.362 2.233 -0.235 O1 A1D16 18 A1D16 H17 H1 H 0 1 N N N N N N -49.893 -28.531 6.270 -4.331 -0.983 2.196 H17 A1D16 19 A1D16 H18 H2 H 0 1 N N N N N N -48.928 -28.921 3.841 -1.832 -1.700 1.990 H18 A1D16 20 A1D16 H3 H3 H 0 1 N N N N N N -41.012 -31.769 1.725 4.454 1.884 1.379 H3 A1D16 21 A1D16 H1 H4 H 0 1 N N N N N N -42.201 -31.966 0.393 3.174 2.766 2.247 H1 A1D16 22 A1D16 H2 H5 H 0 1 N N N N N N -42.048 -30.386 1.234 3.549 1.081 2.684 H2 A1D16 23 A1D16 H4 H6 H 0 1 N N N N N N -43.018 -33.008 2.484 1.478 1.208 1.326 H4 A1D16 24 A1D16 H7 H7 H 0 1 N N N N N N -45.197 -31.955 2.685 3.811 0.042 -0.256 H7 A1D16 25 A1D16 H6 H8 H 0 1 N N N N N N -44.688 -32.021 0.964 3.036 -0.753 1.134 H6 A1D16 26 A1D16 H8 H9 H 0 1 N N N N N N -43.910 -29.464 2.041 1.584 0.100 -1.415 H8 A1D16 27 A1D16 H9 H10 H 0 1 N N N N N N -45.524 -30.552 -0.207 1.886 -2.064 -2.248 H9 A1D16 28 A1D16 H10 H11 H 0 1 N N N N N N -44.425 -29.131 -0.157 3.333 -2.052 -1.188 H10 A1D16 29 A1D16 H11 H12 H 0 1 N N N N N N -46.140 -27.674 0.401 1.411 -3.947 -0.824 H11 A1D16 30 A1D16 H12 H13 H 0 1 N N N N N N -47.208 -28.959 -0.257 2.166 -3.164 0.605 H12 A1D16 31 A1D16 H14 H14 H 0 1 N N N N N N -47.301 -28.034 2.378 -0.486 -2.469 -0.773 H14 A1D16 32 A1D16 H13 H15 H 0 1 N N N N N N -47.870 -29.656 1.856 -0.169 -2.690 0.976 H13 A1D16 33 A1D16 H15 H16 H 0 1 N N N N N N -43.475 -29.632 6.333 -1.117 2.216 -2.530 H15 A1D16 34 A1D16 H16 H17 H 0 1 N N N N N N -47.915 -28.698 7.923 -4.760 0.808 0.432 H16 A1D16 35 A1D16 H5 H18 H 0 1 N N N N N N -43.425 -31.546 4.252 2.093 3.121 0.035 H5 A1D16 36 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1D16 C5 C6 SING N N 1 A1D16 C5 C4 SING N N 2 A1D16 C6 C7 SING N N 3 A1D16 C1 C2 SING N N 4 A1D16 C4 C3 SING N N 5 A1D16 C4 N1 SING N N 6 A1D16 C7 N1 SING N N 7 A1D16 C3 C2 SING N N 8 A1D16 C2 O1 SING N N 9 A1D16 N1 C8 SING N N 10 A1D16 C8 N2 DOUB Y N 11 A1D16 C8 C13 SING Y N 12 A1D16 N2 C9 SING Y N 13 A1D16 C12 C13 SING Y N 14 A1D16 C12 C11 DOUB Y N 15 A1D16 C13 C10 DOUB Y N 16 A1D16 C9 N3 DOUB Y N 17 A1D16 C11 N4 SING Y N 18 A1D16 C10 N3 SING Y N 19 A1D16 C10 N4 SING Y N 20 A1D16 C11 H17 SING N N 21 A1D16 C12 H18 SING N N 22 A1D16 C1 H3 SING N N 23 A1D16 C1 H1 SING N N 24 A1D16 C1 H2 SING N N 25 A1D16 C2 H4 SING N N 26 A1D16 C3 H7 SING N N 27 A1D16 C3 H6 SING N N 28 A1D16 C4 H8 SING N N 29 A1D16 C5 H9 SING N N 30 A1D16 C5 H10 SING N N 31 A1D16 C6 H11 SING N N 32 A1D16 C6 H12 SING N N 33 A1D16 C7 H14 SING N N 34 A1D16 C7 H13 SING N N 35 A1D16 C9 H15 SING N N 36 A1D16 N4 H16 SING N N 37 A1D16 O1 H5 SING N N 38 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1D16 SMILES ACDLabs 14.52 "CC(O)CC1CCCN1c1ncnc2[NH]ccc12" A1D16 InChI InChI 1.06 "InChI=1S/C13H18N4O/c1-9(18)7-10-3-2-6-17(10)13-11-4-5-14-12(11)15-8-16-13/h4-5,8-10,18H,2-3,6-7H2,1H3,(H,14,15,16)/t9-,10-/m1/s1" A1D16 InChIKey InChI 1.06 VBDKWKBGKIWEDR-NXEZZACHSA-N A1D16 SMILES_CANONICAL CACTVS 3.385 "C[C@@H](O)C[C@H]1CCCN1c2ncnc3[nH]ccc23" A1D16 SMILES CACTVS 3.385 "C[CH](O)C[CH]1CCCN1c2ncnc3[nH]ccc23" A1D16 SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "C[C@H](C[C@H]1CCCN1c2c3cc[nH]c3ncn2)O" A1D16 SMILES "OpenEye OEToolkits" 3.1.0.0 "CC(CC1CCCN1c2c3cc[nH]c3ncn2)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1D16 "SYSTEMATIC NAME" ACDLabs 14.52 "(2R)-1-[(2R)-1-(7H-pyrrolo[2,3-d]pyrimidin-4-yl)pyrrolidin-2-yl]propan-2-ol" A1D16 "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "(2~{R})-1-[(2~{R})-1-(7~{H}-pyrrolo[2,3-d]pyrimidin-4-yl)pyrrolidin-2-yl]propan-2-ol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1D16 "Create component" 2026-09-01 RCSB A1D16 "Initial release" 2026-11-04 RCSB #