data_A1D29 # _chem_comp.id A1D29 _chem_comp.name "N-[(5-hydroxypyridin-2-yl)methyl]-7H-pyrrolo[2,3-d]pyrimidine-4-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C13 H11 N5 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2026-09-01 _chem_comp.pdbx_modified_date 2026-10-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 269.259 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1D29 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 15LV _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? _chem_comp.pdbx_comp_type ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1D29 C13 C1 C 0 1 Y N N N N N -46.815 -29.014 4.871 3.250 0.192 -0.003 C13 A1D29 1 A1D29 C11 C2 C 0 1 Y N N N N N -48.806 -28.562 5.836 5.279 1.171 -0.042 C11 A1D29 2 A1D29 C12 C3 C 0 1 Y N N N N N -48.208 -28.740 4.616 3.966 1.462 -0.045 C12 A1D29 3 A1D29 C1 C4 C 0 1 N N N N N N -45.707 -29.404 2.635 0.821 0.820 -0.016 C1 A1D29 4 A1D29 C10 C5 C 0 1 Y N N N N N -46.625 -28.969 6.271 4.243 -0.817 0.022 C10 A1D29 5 A1D29 C2 C6 C 0 1 N N N N N N -44.644 -30.465 0.689 -1.537 1.433 -0.030 C2 A1D29 6 A1D29 C3 C7 C 0 1 Y N N N N N -45.235 -31.836 0.410 -2.876 0.741 -0.009 C3 A1D29 7 A1D29 C4 C8 C 0 1 Y N N N N N -44.643 -32.707 -0.513 -3.530 0.558 1.195 C4 A1D29 8 A1D29 C5 C9 C 0 1 Y N N N N N -45.210 -33.969 -0.750 -4.761 -0.079 1.206 C5 A1D29 9 A1D29 C6 C10 C 0 1 Y N N N N N -46.365 -34.341 -0.038 -5.292 -0.512 -0.005 C6 A1D29 10 A1D29 C7 C11 C 0 1 Y N N N N N -46.925 -33.443 0.888 -4.575 -0.293 -1.172 C7 A1D29 11 A1D29 C8 C12 C 0 1 Y N N N N N -45.642 -29.285 4.120 1.901 -0.193 0.009 C8 A1D29 12 A1D29 C9 C13 C 0 1 Y N N N N N -44.439 -29.428 6.094 2.575 -2.398 0.068 C9 A1D29 13 A1D29 N1 N1 N 0 1 N N N N N N -44.744 -30.164 2.101 -0.469 0.431 -0.004 N1 A1D29 14 A1D29 N2 N2 N 0 1 Y N N N N N -46.344 -32.239 1.074 -3.409 0.322 -1.140 N2 A1D29 15 A1D29 N3 N3 N 0 1 Y N N N N N -44.463 -29.502 4.762 1.618 -1.494 0.045 N3 A1D29 16 A1D29 N4 N4 N 0 1 Y N N N N N -45.453 -29.175 6.924 3.855 -2.085 0.062 N4 A1D29 17 A1D29 N5 N5 N 0 1 Y N N N N N -47.852 -28.688 6.828 5.457 -0.186 -0.003 N5 A1D29 18 A1D29 O1 O1 O 0 1 N N N N N N -46.611 -28.906 1.973 1.098 2.003 -0.049 O1 A1D29 19 A1D29 O2 O2 O 0 1 N N N N N N -46.933 -35.556 -0.241 -6.495 -1.143 -0.043 O2 A1D29 20 A1D29 H10 H1 H 0 1 N N N N N N -49.854 -28.356 5.997 6.076 1.900 -0.068 H10 A1D29 21 A1D29 H11 H2 H 0 1 N N N N N N -48.687 -28.686 3.650 3.525 2.447 -0.072 H11 A1D29 22 A1D29 H2 H3 H 0 1 N N N N N N -43.586 -30.456 0.388 -1.452 2.032 -0.936 H2 A1D29 23 A1D29 H3 H4 H 0 1 N N N N N N -45.195 -29.706 0.114 -1.449 2.080 0.843 H3 A1D29 24 A1D29 H4 H5 H 0 1 N N N N N N -43.750 -32.408 -1.042 -3.088 0.908 2.116 H4 A1D29 25 A1D29 H5 H6 H 0 1 N N N N N N -44.767 -34.644 -1.467 -5.294 -0.235 2.132 H5 A1D29 26 A1D29 H7 H7 H 0 1 N N N N N N -47.810 -33.714 1.444 -4.978 -0.625 -2.117 H7 A1D29 27 A1D29 H8 H8 H 0 1 N N N N N N -43.478 -29.594 6.559 2.299 -3.442 0.101 H8 A1D29 28 A1D29 H1 H9 H 0 1 N N N N N N -44.053 -30.547 2.714 -0.690 -0.514 0.022 H1 A1D29 29 A1D29 H9 H10 H 0 1 N N N N N N -48.028 -28.589 7.808 6.318 -0.634 0.006 H9 A1D29 30 A1D29 H12 H11 H 0 1 N N N N N N -47.698 -35.645 0.315 -7.248 -0.546 -0.156 H12 A1D29 31 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1D29 C5 C4 DOUB Y N 1 A1D29 C5 C6 SING Y N 2 A1D29 C4 C3 SING Y N 3 A1D29 O2 C6 SING N N 4 A1D29 C6 C7 DOUB Y N 5 A1D29 C3 C2 SING N N 6 A1D29 C3 N2 DOUB Y N 7 A1D29 C2 N1 SING N N 8 A1D29 C7 N2 SING Y N 9 A1D29 O1 C1 DOUB N N 10 A1D29 N1 C1 SING N N 11 A1D29 C1 C8 SING N N 12 A1D29 C8 N3 DOUB Y N 13 A1D29 C8 C13 SING Y N 14 A1D29 C12 C13 SING Y N 15 A1D29 C12 C11 DOUB Y N 16 A1D29 N3 C9 SING Y N 17 A1D29 C13 C10 DOUB Y N 18 A1D29 C11 N5 SING Y N 19 A1D29 C9 N4 DOUB Y N 20 A1D29 C10 N5 SING Y N 21 A1D29 C10 N4 SING Y N 22 A1D29 C11 H10 SING N N 23 A1D29 C12 H11 SING N N 24 A1D29 C2 H2 SING N N 25 A1D29 C2 H3 SING N N 26 A1D29 C4 H4 SING N N 27 A1D29 C5 H5 SING N N 28 A1D29 C7 H7 SING N N 29 A1D29 C9 H8 SING N N 30 A1D29 N1 H1 SING N N 31 A1D29 N5 H9 SING N N 32 A1D29 O2 H12 SING N N 33 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1D29 SMILES ACDLabs 14.52 "Oc1ccc(nc1)CNC(=O)c1ncnc2[NH]ccc12" A1D29 InChI InChI 1.06 "InChI=1S/C13H11N5O2/c19-9-2-1-8(15-6-9)5-16-13(20)11-10-3-4-14-12(10)18-7-17-11/h1-4,6-7,19H,5H2,(H,16,20)(H,14,17,18)" A1D29 InChIKey InChI 1.06 WQPDRLGNDLBNIF-UHFFFAOYSA-N A1D29 SMILES_CANONICAL CACTVS 3.385 "Oc1ccc(CNC(=O)c2ncnc3[nH]ccc23)nc1" A1D29 SMILES CACTVS 3.385 "Oc1ccc(CNC(=O)c2ncnc3[nH]ccc23)nc1" A1D29 SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1cc(ncc1O)CNC(=O)c2c3cc[nH]c3ncn2" A1D29 SMILES "OpenEye OEToolkits" 3.1.0.0 "c1cc(ncc1O)CNC(=O)c2c3cc[nH]c3ncn2" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1D29 "SYSTEMATIC NAME" ACDLabs 14.52 "N-[(5-hydroxypyridin-2-yl)methyl]-7H-pyrrolo[2,3-d]pyrimidine-4-carboxamide" A1D29 "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "~{N}-[(5-oxidanylpyridin-2-yl)methyl]-7~{H}-pyrrolo[2,3-d]pyrimidine-4-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1D29 "Create component" 2026-09-01 RCSB A1D29 "Initial release" 2026-11-04 RCSB #