data_A1D2G # _chem_comp.id A1D2G _chem_comp.name "4-[(3S)-3-{[(3S)-oxolan-3-yl]methyl}piperidin-1-yl]-7H-pyrrolo[2,3-d]pyrimidine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C16 H22 N4 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2026-09-01 _chem_comp.pdbx_modified_date 2026-10-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 286.372 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1D2G _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 15JI _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? _chem_comp.pdbx_comp_type ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1D2G C13 C1 C 0 1 Y N N N N N -46.471 -29.133 4.943 -3.218 0.217 -0.263 C13 A1D2G 1 A1D2G C16 C2 C 0 1 Y N N N N N -46.459 -29.185 6.361 -4.403 -0.542 -0.259 C16 A1D2G 2 A1D2G C15 C3 C 0 1 Y N N N N N -48.600 -28.900 5.668 -4.945 1.577 -0.758 C15 A1D2G 3 A1D2G C11 C4 C 0 1 N N N N N N -47.150 -33.776 -0.847 4.311 0.263 -1.217 C11 A1D2G 4 A1D2G C12 C5 C 0 1 N N N N N N -46.022 -29.898 2.095 0.317 -0.608 0.341 C12 A1D2G 5 A1D2G C1 C6 C 0 1 Y N N N N N -44.242 -29.445 6.443 -3.163 -2.408 0.267 C1 A1D2G 6 A1D2G C10 C7 C 0 1 N N N N N N -46.863 -35.227 0.904 6.406 -0.329 -0.333 C10 A1D2G 7 A1D2G C14 C8 C 0 1 Y N N N N N -47.837 -28.948 4.525 -3.612 1.586 -0.591 C14 A1D2G 8 A1D2G C2 C9 C 0 1 Y N N N N N -45.194 -29.254 4.327 -2.004 -0.428 0.016 C2 A1D2G 9 A1D2G C3 C10 C 0 1 N N N N N N -43.621 -29.168 2.499 -0.877 1.409 0.954 C3 A1D2G 10 A1D2G C4 C11 C 0 1 N N N N N N -43.093 -30.488 1.915 0.398 2.246 0.829 C4 A1D2G 11 A1D2G C5 C12 C 0 1 N N N N N N -44.208 -31.514 1.706 1.612 1.368 1.149 C5 A1D2G 12 A1D2G C6 C13 C 0 1 N N S N N N -45.398 -30.829 1.040 1.628 0.168 0.198 C6 A1D2G 13 A1D2G C7 C14 C 0 1 N N N N N N -46.491 -31.771 0.511 2.804 -0.746 0.549 C7 A1D2G 14 A1D2G C8 C15 C 0 1 N N S N N N -46.041 -33.144 -0.028 4.119 -0.008 0.291 C8 A1D2G 15 A1D2G C9 C16 C 0 1 N N N N N N -45.782 -34.161 1.060 5.336 -0.914 0.621 C9 A1D2G 16 A1D2G N1 N1 N 0 1 Y N N N N N -44.098 -29.401 5.120 -2.028 -1.733 0.274 N1 A1D2G 17 A1D2G N2 N2 N 0 1 N N N N N N -45.021 -29.221 2.933 -0.813 0.275 0.024 N2 A1D2G 18 A1D2G N3 N3 N 0 1 Y N N N N N -47.767 -29.047 6.766 -5.429 0.310 -0.562 N3 A1D2G 19 A1D2G N4 N4 N 0 1 Y N N N N N -45.366 -29.347 7.153 -4.324 -1.844 0.015 N4 A1D2G 20 A1D2G O1 O1 O 0 1 N N N N N N -47.782 -34.767 -0.063 5.690 0.030 -1.526 O1 A1D2G 21 A1D2G H21 H1 H 0 1 N N N N N N -49.671 -28.769 5.704 -5.545 2.439 -1.010 H21 A1D2G 22 A1D2G H16 H2 H 0 1 N N N N N N -46.726 -34.235 -1.753 3.682 -0.414 -1.796 H16 A1D2G 23 A1D2G H17 H3 H 0 1 N N N N N N -47.883 -33.007 -1.134 4.050 1.297 -1.443 H17 A1D2G 24 A1D2G H18 H4 H 0 1 N N N N N N -46.620 -29.133 1.577 0.320 -1.455 -0.345 H18 A1D2G 25 A1D2G H19 H5 H 0 1 N N N N N N -46.677 -30.496 2.746 0.219 -0.970 1.364 H19 A1D2G 26 A1D2G H1 H6 H 0 1 N N N N N N -43.334 -29.577 7.013 -3.138 -3.465 0.486 H1 A1D2G 27 A1D2G H14 H7 H 0 1 N N N N N N -47.376 -35.384 1.864 6.867 0.554 0.111 H14 A1D2G 28 A1D2G H15 H8 H 0 1 N N N N N N -46.411 -36.173 0.571 7.165 -1.079 -0.557 H15 A1D2G 29 A1D2G H20 H9 H 0 1 N N N N N N -48.193 -28.863 3.509 -2.958 2.440 -0.682 H20 A1D2G 30 A1D2G H3 H10 H 0 1 N N N N N N -43.000 -28.902 3.367 -0.970 1.038 1.974 H3 A1D2G 31 A1D2G H2 H11 H 0 1 N N N N N N -43.528 -28.388 1.729 -1.742 2.028 0.713 H2 A1D2G 32 A1D2G H4 H12 H 0 1 N N N N N N -42.349 -30.909 2.607 0.484 2.629 -0.188 H4 A1D2G 33 A1D2G H5 H13 H 0 1 N N N N N N -42.616 -30.281 0.946 0.357 3.079 1.530 H5 A1D2G 34 A1D2G H7 H14 H 0 1 N N N N N N -44.517 -31.926 2.678 2.525 1.948 1.019 H7 A1D2G 35 A1D2G H6 H15 H 0 1 N N N N N N -43.844 -32.328 1.062 1.546 1.017 2.178 H6 A1D2G 36 A1D2G H8 H16 H 0 1 N N N N N N -45.030 -30.215 0.205 1.733 0.519 -0.829 H8 A1D2G 37 A1D2G H9 H17 H 0 1 N N N N N N -47.010 -31.249 -0.306 2.744 -1.026 1.601 H9 A1D2G 38 A1D2G H10 H18 H 0 1 N N N N N N -47.196 -31.954 1.335 2.764 -1.643 -0.069 H10 A1D2G 39 A1D2G H11 H19 H 0 1 N N N N N N -45.141 -33.020 -0.648 4.158 0.922 0.860 H11 A1D2G 40 A1D2G H12 H20 H 0 1 N N N N N N -44.784 -34.607 0.937 5.125 -1.957 0.383 H12 A1D2G 41 A1D2G H13 H21 H 0 1 N N N N N N -45.852 -33.688 2.050 5.636 -0.805 1.663 H13 A1D2G 42 A1D2G H22 H22 H 0 1 N N N N N N -48.073 -29.052 7.718 -6.363 0.054 -0.629 H22 A1D2G 43 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1D2G C11 O1 SING N N 1 A1D2G C11 C8 SING N N 2 A1D2G O1 C10 SING N N 3 A1D2G C8 C7 SING N N 4 A1D2G C8 C9 SING N N 5 A1D2G C7 C6 SING N N 6 A1D2G C10 C9 SING N N 7 A1D2G C6 C5 SING N N 8 A1D2G C6 C12 SING N N 9 A1D2G C5 C4 SING N N 10 A1D2G C4 C3 SING N N 11 A1D2G C12 N2 SING N N 12 A1D2G C3 N2 SING N N 13 A1D2G N2 C2 SING N N 14 A1D2G C2 C13 DOUB Y N 15 A1D2G C2 N1 SING Y N 16 A1D2G C14 C13 SING Y N 17 A1D2G C14 C15 DOUB Y N 18 A1D2G C13 C16 SING Y N 19 A1D2G N1 C1 DOUB Y N 20 A1D2G C15 N3 SING Y N 21 A1D2G C16 N3 SING Y N 22 A1D2G C16 N4 DOUB Y N 23 A1D2G C1 N4 SING Y N 24 A1D2G C15 H21 SING N N 25 A1D2G C11 H16 SING N N 26 A1D2G C11 H17 SING N N 27 A1D2G C12 H18 SING N N 28 A1D2G C12 H19 SING N N 29 A1D2G C1 H1 SING N N 30 A1D2G C10 H14 SING N N 31 A1D2G C10 H15 SING N N 32 A1D2G C14 H20 SING N N 33 A1D2G C3 H3 SING N N 34 A1D2G C3 H2 SING N N 35 A1D2G C4 H4 SING N N 36 A1D2G C4 H5 SING N N 37 A1D2G C5 H7 SING N N 38 A1D2G C5 H6 SING N N 39 A1D2G C6 H8 SING N N 40 A1D2G C7 H9 SING N N 41 A1D2G C7 H10 SING N N 42 A1D2G C8 H11 SING N N 43 A1D2G C9 H12 SING N N 44 A1D2G C9 H13 SING N N 45 A1D2G N3 H22 SING N N 46 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1D2G SMILES ACDLabs 14.52 "C1N(CCCC1CC1CCOC1)c1ncnc2[NH]ccc21" A1D2G InChI InChI 1.06 "InChI=1S/C16H22N4O/c1-2-12(8-13-4-7-21-10-13)9-20(6-1)16-14-3-5-17-15(14)18-11-19-16/h3,5,11-13H,1-2,4,6-10H2,(H,17,18,19)/t12-,13+/m0/s1" A1D2G InChIKey InChI 1.06 BFFISDPRKMRYGQ-QWHCGFSZSA-N A1D2G SMILES_CANONICAL CACTVS 3.385 "C1C[C@@H](C[C@H]2CCOC2)CN(C1)c3ncnc4[nH]ccc34" A1D2G SMILES CACTVS 3.385 "C1C[CH](C[CH]2CCOC2)CN(C1)c3ncnc4[nH]ccc34" A1D2G SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1c[nH]c2c1c(ncn2)N3CCC[C@H](C3)C[C@H]4CCOC4" A1D2G SMILES "OpenEye OEToolkits" 3.1.0.0 "c1c[nH]c2c1c(ncn2)N3CCCC(C3)CC4CCOC4" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1D2G "SYSTEMATIC NAME" ACDLabs 14.52 "4-[(3S)-3-{[(3S)-oxolan-3-yl]methyl}piperidin-1-yl]-7H-pyrrolo[2,3-d]pyrimidine" A1D2G "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "4-[(3~{S})-3-[[(3~{S})-oxolan-3-yl]methyl]piperidin-1-yl]-7~{H}-pyrrolo[2,3-d]pyrimidine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1D2G "Create component" 2026-09-01 RCSB A1D2G "Initial release" 2026-11-04 RCSB #