data_A1D2R # _chem_comp.id A1D2R _chem_comp.name "tert-butyl [(3S,5S)-5-methyl-1-(7H-pyrrolo[2,3-d]pyrimidin-4-yl)piperidin-3-yl]carbamate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C17 H25 N5 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2026-09-01 _chem_comp.pdbx_modified_date 2026-10-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 331.413 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1D2R _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 15LS _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? _chem_comp.pdbx_comp_type ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1D2R C13 C1 C 0 1 Y N N N N N -39.722 -34.763 -8.263 -3.188 -2.214 -0.043 C13 A1D2R 1 A1D2R C17 C2 C 0 1 N N N N N N -39.306 -38.806 -5.819 -1.808 2.328 -0.384 C17 A1D2R 2 A1D2R C16 C3 C 0 1 Y N N N N N -40.353 -35.609 -7.307 -2.103 -1.320 0.012 C16 A1D2R 3 A1D2R C15 C4 C 0 1 Y N N N N N -41.360 -34.822 -6.635 -0.919 -2.131 0.287 C15 A1D2R 4 A1D2R C11 C5 C 0 1 Y N N N N N -39.859 -36.946 -7.264 -2.346 0.048 -0.189 C11 A1D2R 5 A1D2R C12 C6 C 0 1 Y N N N N N -38.355 -36.379 -8.956 -4.586 -0.435 -0.467 C12 A1D2R 6 A1D2R C1 C7 C 0 1 N N N N N N -37.839 -37.430 -4.316 -1.143 4.716 -0.699 C1 A1D2R 7 A1D2R C10 C8 C 0 1 N N N N N N -41.529 -37.685 -5.582 -0.587 0.880 1.128 C10 A1D2R 8 A1D2R C14 C9 C 0 1 Y N N N N N -41.316 -33.566 -7.182 -1.334 -3.405 0.378 C14 A1D2R 9 A1D2R C2 C10 C 0 1 N N S N N N -38.947 -38.497 -4.355 -0.625 3.294 -0.473 C2 A1D2R 10 A1D2R C3 C11 C 0 1 N N N N N N -40.131 -38.063 -3.469 0.170 3.242 0.835 C3 A1D2R 11 A1D2R C4 C12 C 0 1 N N S N N N -41.189 -37.181 -4.170 0.633 1.804 1.084 C4 A1D2R 12 A1D2R C5 C13 C 0 1 N N N N N N -42.980 -35.809 -3.061 2.433 0.409 0.216 C5 A1D2R 13 A1D2R C6 C14 C 0 1 N N N N N N -45.008 -34.865 -2.011 4.205 -1.032 -0.476 C6 A1D2R 14 A1D2R C7 C15 C 0 1 N N N N N N -44.361 -33.971 -0.931 5.123 -0.579 0.662 C7 A1D2R 15 A1D2R C8 C16 C 0 1 N N N N N N -45.451 -34.035 -3.233 5.045 -1.333 -1.719 C8 A1D2R 16 A1D2R C9 C17 C 0 1 N N N N N N -46.246 -35.562 -1.424 3.451 -2.293 -0.052 C9 A1D2R 17 A1D2R N1 N1 N 0 1 N N N N N N -42.427 -37.038 -3.400 1.526 1.383 0.002 N1 A1D2R 18 A1D2R N2 N2 N 0 1 N N N N N N -40.338 -37.941 -6.388 -1.313 0.966 -0.146 N2 A1D2R 19 A1D2R N3 N3 N 0 1 Y N N N N N -38.852 -37.283 -8.112 -3.596 0.438 -0.424 N3 A1D2R 20 A1D2R N4 N4 N 0 1 Y N N N N N -38.712 -35.102 -9.115 -4.403 -1.726 -0.289 N4 A1D2R 21 A1D2R N5 N5 N 0 1 Y N N N N N -40.334 -33.534 -8.155 -2.690 -3.467 0.182 N5 A1D2R 22 A1D2R O1 O1 O 0 1 N N N N N N -42.465 -34.731 -3.343 2.510 -0.120 1.307 O1 A1D2R 23 A1D2R O2 O2 O 0 1 N N N N N N -44.158 -35.952 -2.396 3.254 0.023 -0.779 O2 A1D2R 24 A1D2R H25 H1 H 0 1 N N N N N N -39.662 -39.846 -5.873 -2.460 2.626 0.438 H25 A1D2R 25 A1D2R H24 H2 H 0 1 N N N N N N -38.395 -38.698 -6.426 -2.368 2.352 -1.319 H24 A1D2R 26 A1D2R H23 H3 H 0 1 N N N N N N -42.022 -35.159 -5.851 0.095 -1.775 0.396 H23 A1D2R 27 A1D2R H20 H4 H 0 1 N N N N N N -37.557 -36.725 -9.597 -5.586 -0.076 -0.660 H20 A1D2R 28 A1D2R H1 H5 H 0 1 N N N N N N -37.580 -37.207 -3.270 -1.786 5.005 0.132 H1 A1D2R 29 A1D2R H3 H6 H 0 1 N N N N N N -36.949 -37.806 -4.841 -0.300 5.404 -0.762 H3 A1D2R 30 A1D2R H2 H7 H 0 1 N N N N N N -38.195 -36.513 -4.809 -1.712 4.752 -1.628 H2 A1D2R 31 A1D2R H19 H8 H 0 1 N N N N N N -42.141 -36.925 -6.090 -0.259 -0.147 1.291 H19 A1D2R 32 A1D2R H18 H9 H 0 1 N N N N N N -42.103 -38.619 -5.494 -1.244 1.186 1.942 H18 A1D2R 33 A1D2R H22 H10 H 0 1 N N N N N N -41.946 -32.736 -6.899 -0.696 -4.254 0.576 H22 A1D2R 34 A1D2R H4 H11 H 0 1 N N N N N N -38.531 -39.417 -3.918 0.019 3.005 -1.303 H4 A1D2R 35 A1D2R H6 H12 H 0 1 N N N N N N -40.633 -38.971 -3.103 1.038 3.896 0.760 H6 A1D2R 36 A1D2R H5 H13 H 0 1 N N N N N N -39.728 -37.498 -2.616 -0.463 3.569 1.660 H5 A1D2R 37 A1D2R H7 H14 H 0 1 N N N N N N -40.746 -36.181 -4.284 1.163 1.752 2.035 H7 A1D2R 38 A1D2R H10 H15 H 0 1 N N N N N N -44.057 -34.591 -0.075 5.837 -1.371 0.889 H10 A1D2R 39 A1D2R H11 H16 H 0 1 N N N N N N -43.478 -33.469 -1.352 5.660 0.320 0.359 H11 A1D2R 40 A1D2R H9 H17 H 0 1 N N N N N N -45.088 -33.216 -0.597 4.525 -0.364 1.547 H9 A1D2R 41 A1D2R H12 H18 H 0 1 N N N N N N -46.100 -33.211 -2.902 4.391 -1.655 -2.530 H12 A1D2R 42 A1D2R H14 H19 H 0 1 N N N N N N -44.564 -33.623 -3.737 5.582 -0.434 -2.021 H14 A1D2R 43 A1D2R H13 H20 H 0 1 N N N N N N -46.004 -34.679 -3.933 5.759 -2.124 -1.492 H13 A1D2R 44 A1D2R H15 H21 H 0 1 N N N N N N -45.950 -36.160 -0.550 2.853 -2.079 0.834 H15 A1D2R 45 A1D2R H17 H22 H 0 1 N N N N N N -46.982 -34.804 -1.118 2.797 -2.615 -0.862 H17 A1D2R 46 A1D2R H16 H23 H 0 1 N N N N N N -46.691 -36.220 -2.185 4.165 -3.085 0.175 H16 A1D2R 47 A1D2R H8 H24 H 0 1 N N N N N N -42.899 -37.868 -3.103 1.465 1.805 -0.869 H8 A1D2R 48 A1D2R H21 H25 H 0 1 N N N N N N -40.101 -32.731 -8.703 -3.218 -4.281 0.201 H21 A1D2R 49 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1D2R N4 C12 DOUB Y N 1 A1D2R N4 C13 SING Y N 2 A1D2R C12 N3 SING Y N 3 A1D2R C13 N5 SING Y N 4 A1D2R C13 C16 DOUB Y N 5 A1D2R N5 C14 SING Y N 6 A1D2R N3 C11 DOUB Y N 7 A1D2R C16 C11 SING Y N 8 A1D2R C16 C15 SING Y N 9 A1D2R C11 N2 SING N N 10 A1D2R C14 C15 DOUB Y N 11 A1D2R N2 C17 SING N N 12 A1D2R N2 C10 SING N N 13 A1D2R C17 C2 SING N N 14 A1D2R C10 C4 SING N N 15 A1D2R C2 C1 SING N N 16 A1D2R C2 C3 SING N N 17 A1D2R C4 C3 SING N N 18 A1D2R C4 N1 SING N N 19 A1D2R N1 C5 SING N N 20 A1D2R O1 C5 DOUB N N 21 A1D2R C8 C6 SING N N 22 A1D2R C5 O2 SING N N 23 A1D2R O2 C6 SING N N 24 A1D2R C6 C9 SING N N 25 A1D2R C6 C7 SING N N 26 A1D2R C17 H25 SING N N 27 A1D2R C17 H24 SING N N 28 A1D2R C15 H23 SING N N 29 A1D2R C12 H20 SING N N 30 A1D2R C1 H1 SING N N 31 A1D2R C1 H3 SING N N 32 A1D2R C1 H2 SING N N 33 A1D2R C10 H19 SING N N 34 A1D2R C10 H18 SING N N 35 A1D2R C14 H22 SING N N 36 A1D2R C2 H4 SING N N 37 A1D2R C3 H6 SING N N 38 A1D2R C3 H5 SING N N 39 A1D2R C4 H7 SING N N 40 A1D2R C7 H10 SING N N 41 A1D2R C7 H11 SING N N 42 A1D2R C7 H9 SING N N 43 A1D2R C8 H12 SING N N 44 A1D2R C8 H14 SING N N 45 A1D2R C8 H13 SING N N 46 A1D2R C9 H15 SING N N 47 A1D2R C9 H17 SING N N 48 A1D2R C9 H16 SING N N 49 A1D2R N1 H8 SING N N 50 A1D2R N5 H21 SING N N 51 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1D2R SMILES ACDLabs 14.52 "CC(C)(C)OC(=O)NC1CC(C)CN(C1)c1ncnc2[NH]ccc12" A1D2R InChI InChI 1.06 "InChI=1S/C17H25N5O2/c1-11-7-12(21-16(23)24-17(2,3)4)9-22(8-11)15-13-5-6-18-14(13)19-10-20-15/h5-6,10-12H,7-9H2,1-4H3,(H,21,23)(H,18,19,20)/t11-,12-/m0/s1" A1D2R InChIKey InChI 1.06 RNZMLVSKPXGATO-RYUDHWBXSA-N A1D2R SMILES_CANONICAL CACTVS 3.385 "C[C@H]1C[C@@H](CN(C1)c2ncnc3[nH]ccc23)NC(=O)OC(C)(C)C" A1D2R SMILES CACTVS 3.385 "C[CH]1C[CH](CN(C1)c2ncnc3[nH]ccc23)NC(=O)OC(C)(C)C" A1D2R SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "C[C@H]1C[C@@H](CN(C1)c2c3cc[nH]c3ncn2)NC(=O)OC(C)(C)C" A1D2R SMILES "OpenEye OEToolkits" 3.1.0.0 "CC1CC(CN(C1)c2c3cc[nH]c3ncn2)NC(=O)OC(C)(C)C" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1D2R "SYSTEMATIC NAME" ACDLabs 14.52 "tert-butyl [(3S,5S)-5-methyl-1-(7H-pyrrolo[2,3-d]pyrimidin-4-yl)piperidin-3-yl]carbamate" A1D2R "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "~{tert}-butyl ~{N}-[(3~{S},5~{S})-5-methyl-1-(7~{H}-pyrrolo[2,3-d]pyrimidin-4-yl)piperidin-3-yl]carbamate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1D2R "Create component" 2026-09-01 RCSB A1D2R "Initial release" 2026-11-04 RCSB #