data_A1D2Y # _chem_comp.id A1D2Y _chem_comp.name "N-[(3R)-6-hydroxyhexan-3-yl]-4-(methylcarbamamido)benzamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C15 H23 N3 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2026-09-01 _chem_comp.pdbx_modified_date 2026-10-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 293.361 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1D2Y _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 15JX _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? _chem_comp.pdbx_comp_type ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1D2Y C13 C1 C 0 1 N N N N N N -52.127 -29.413 10.238 6.878 1.318 -1.274 C13 A1D2Y 1 A1D2Y C15 C2 C 0 1 Y N N N N N -46.645 -29.497 5.398 0.638 0.226 -0.148 C15 A1D2Y 2 A1D2Y C11 C3 C 0 1 Y N N N N N -48.624 -29.123 6.794 2.807 -0.234 0.765 C11 A1D2Y 3 A1D2Y C12 C4 C 0 1 N N N N N N -50.519 -29.297 8.370 4.826 0.570 -0.192 C12 A1D2Y 4 A1D2Y C1 C5 C 0 1 N N N N N N -46.783 -31.774 0.527 -3.041 -3.160 -1.097 C1 A1D2Y 5 A1D2Y C10 C6 C 0 1 Y N N N N N -49.363 -28.865 5.621 2.291 -1.318 1.469 C10 A1D2Y 6 A1D2Y C14 C7 C 0 1 Y N N N N N -47.258 -29.446 6.669 1.974 0.539 -0.038 C14 A1D2Y 7 A1D2Y C2 C8 C 0 1 N N N N N N -45.299 -31.566 0.842 -3.728 -1.866 -1.539 C2 A1D2Y 8 A1D2Y C3 C9 C 0 1 N N R N N N -44.965 -30.177 1.420 -3.543 -0.796 -0.461 C3 A1D2Y 9 A1D2Y C4 C10 C 0 1 N N N N N N -43.444 -30.047 1.623 -4.334 0.456 -0.844 C4 A1D2Y 10 A1D2Y C5 C11 C 0 1 N N N N N N -42.991 -28.639 2.056 -4.250 1.479 0.291 C5 A1D2Y 11 A1D2Y C6 C12 C 0 1 N N N N N N -43.356 -27.565 1.022 -5.041 2.731 -0.092 C6 A1D2Y 12 A1D2Y C7 C13 C 0 1 N N N N N N -46.812 -29.274 2.837 -1.314 -1.204 0.436 C7 A1D2Y 13 A1D2Y C8 C14 C 0 1 Y N N N N N -47.387 -29.218 4.227 0.117 -0.866 0.552 C8 A1D2Y 14 A1D2Y C9 C15 C 0 1 Y N N N N N -48.755 -28.909 4.358 0.956 -1.636 1.363 C9 A1D2Y 15 A1D2Y N1 N1 N 0 1 N N N N N N -45.671 -29.967 2.684 -2.122 -0.460 -0.346 N1 A1D2Y 16 A1D2Y N2 N2 N 0 1 N N N N N N -49.215 -29.101 8.087 4.160 0.086 0.874 N2 A1D2Y 17 A1D2Y N3 N3 N 0 1 N N N N N N -50.794 -29.239 9.679 6.153 0.791 -0.114 N3 A1D2Y 18 A1D2Y O1 O1 O 0 1 N N N N N N -42.666 -26.365 1.291 -4.963 3.687 0.968 O1 A1D2Y 19 A1D2Y O2 O2 O 0 1 N N N N N N -47.416 -28.753 1.898 -1.766 -2.154 1.046 O2 A1D2Y 20 A1D2Y O3 O3 O 0 1 N N N N N N -51.387 -29.518 7.530 4.230 0.808 -1.225 O3 A1D2Y 21 A1D2Y H20 H1 H 0 1 N N N N N N -52.081 -29.319 11.333 6.774 0.627 -2.111 H20 A1D2Y 22 A1D2Y H21 H2 H 0 1 N N N N N N -52.798 -28.642 9.832 6.465 2.288 -1.550 H21 A1D2Y 23 A1D2Y H19 H3 H 0 1 N N N N N N -52.509 -30.409 9.971 7.932 1.430 -1.023 H19 A1D2Y 24 A1D2Y H23 H4 H 0 1 N N N N N N -45.598 -29.752 5.319 -0.008 0.826 -0.772 H23 A1D2Y 25 A1D2Y H3 H5 H 0 1 N N N N N N -46.934 -32.785 0.121 -1.977 -2.974 -0.949 H3 A1D2Y 26 A1D2Y H1 H6 H 0 1 N N N N N N -47.373 -31.657 1.448 -3.483 -3.505 -0.163 H1 A1D2Y 27 A1D2Y H2 H7 H 0 1 N N N N N N -47.108 -31.029 -0.214 -3.173 -3.922 -1.865 H2 A1D2Y 28 A1D2Y H16 H8 H 0 1 N N N N N N -50.414 -28.630 5.697 2.938 -1.910 2.098 H16 A1D2Y 29 A1D2Y H22 H9 H 0 1 N N N N N N -46.675 -29.656 7.553 2.376 1.384 -0.576 H22 A1D2Y 30 A1D2Y H5 H10 H 0 1 N N N N N N -44.992 -32.327 1.574 -3.286 -1.520 -2.473 H5 A1D2Y 31 A1D2Y H4 H11 H 0 1 N N N N N N -44.727 -31.699 -0.088 -4.792 -2.052 -1.687 H4 A1D2Y 32 A1D2Y H6 H12 H 0 1 N N N N N N -45.284 -29.415 0.694 -3.905 -1.177 0.494 H6 A1D2Y 33 A1D2Y H8 H13 H 0 1 N N N N N N -43.135 -30.764 2.398 -3.914 0.887 -1.753 H8 A1D2Y 34 A1D2Y H7 H14 H 0 1 N N N N N N -42.945 -30.295 0.674 -5.376 0.189 -1.016 H7 A1D2Y 35 A1D2Y H10 H15 H 0 1 N N N N N N -41.899 -28.644 2.190 -4.670 1.048 1.200 H10 A1D2Y 36 A1D2Y H9 H16 H 0 1 N N N N N N -43.476 -28.390 3.011 -3.208 1.746 0.464 H9 A1D2Y 37 A1D2Y H12 H17 H 0 1 N N N N N N -44.439 -27.377 1.063 -4.621 3.162 -1.001 H12 A1D2Y 38 A1D2Y H11 H18 H 0 1 N N N N N N -43.083 -27.922 0.018 -6.084 2.464 -0.264 H11 A1D2Y 39 A1D2Y H15 H19 H 0 1 N N N N N N -49.343 -28.704 3.475 0.557 -2.480 1.905 H15 A1D2Y 40 A1D2Y H14 H20 H 0 1 N N N N N N -45.270 -30.374 3.505 -1.762 0.298 -0.832 H14 A1D2Y 41 A1D2Y H17 H21 H 0 1 N N N N N N -48.606 -28.923 8.860 4.621 -0.041 1.718 H17 A1D2Y 42 A1D2Y H18 H22 H 0 1 N N N N N N -50.038 -29.066 10.311 6.629 0.602 0.710 H18 A1D2Y 43 A1D2Y H13 H23 H 0 1 N N N N N N -42.902 -25.711 0.643 -5.443 4.508 0.794 H13 A1D2Y 44 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1D2Y C1 C2 SING N N 1 A1D2Y C2 C3 SING N N 2 A1D2Y C6 O1 SING N N 3 A1D2Y C6 C5 SING N N 4 A1D2Y C3 C4 SING N N 5 A1D2Y C3 N1 SING N N 6 A1D2Y C4 C5 SING N N 7 A1D2Y O2 C7 DOUB N N 8 A1D2Y N1 C7 SING N N 9 A1D2Y C7 C8 SING N N 10 A1D2Y C8 C9 DOUB Y N 11 A1D2Y C8 C15 SING Y N 12 A1D2Y C9 C10 SING Y N 13 A1D2Y C15 C14 DOUB Y N 14 A1D2Y C10 C11 DOUB Y N 15 A1D2Y C14 C11 SING Y N 16 A1D2Y C11 N2 SING N N 17 A1D2Y O3 C12 DOUB N N 18 A1D2Y N2 C12 SING N N 19 A1D2Y C12 N3 SING N N 20 A1D2Y N3 C13 SING N N 21 A1D2Y C13 H20 SING N N 22 A1D2Y C13 H21 SING N N 23 A1D2Y C13 H19 SING N N 24 A1D2Y C15 H23 SING N N 25 A1D2Y C1 H3 SING N N 26 A1D2Y C1 H1 SING N N 27 A1D2Y C1 H2 SING N N 28 A1D2Y C10 H16 SING N N 29 A1D2Y C14 H22 SING N N 30 A1D2Y C2 H5 SING N N 31 A1D2Y C2 H4 SING N N 32 A1D2Y C3 H6 SING N N 33 A1D2Y C4 H8 SING N N 34 A1D2Y C4 H7 SING N N 35 A1D2Y C5 H10 SING N N 36 A1D2Y C5 H9 SING N N 37 A1D2Y C6 H12 SING N N 38 A1D2Y C6 H11 SING N N 39 A1D2Y C9 H15 SING N N 40 A1D2Y N1 H14 SING N N 41 A1D2Y N2 H17 SING N N 42 A1D2Y N3 H18 SING N N 43 A1D2Y O1 H13 SING N N 44 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1D2Y SMILES ACDLabs 14.52 "O=C(Nc1ccc(cc1)C(=O)NC(CC)CCCO)NC" A1D2Y InChI InChI 1.06 "InChI=1S/C15H23N3O3/c1-3-12(5-4-10-19)17-14(20)11-6-8-13(9-7-11)18-15(21)16-2/h6-9,12,19H,3-5,10H2,1-2H3,(H,17,20)(H2,16,18,21)/t12-/m1/s1" A1D2Y InChIKey InChI 1.06 NLLGLWWTMYAEPW-GFCCVEGCSA-N A1D2Y SMILES_CANONICAL CACTVS 3.385 "CC[C@H](CCCO)NC(=O)c1ccc(NC(=O)NC)cc1" A1D2Y SMILES CACTVS 3.385 "CC[CH](CCCO)NC(=O)c1ccc(NC(=O)NC)cc1" A1D2Y SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "CC[C@H](CCCO)NC(=O)c1ccc(cc1)NC(=O)NC" A1D2Y SMILES "OpenEye OEToolkits" 3.1.0.0 "CCC(CCCO)NC(=O)c1ccc(cc1)NC(=O)NC" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1D2Y "SYSTEMATIC NAME" ACDLabs 14.52 "N-[(3R)-6-hydroxyhexan-3-yl]-4-(methylcarbamamido)benzamide" A1D2Y "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "4-(methylcarbamoylamino)-~{N}-[(3~{R})-6-oxidanylhexan-3-yl]benzamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1D2Y "Create component" 2026-09-01 RCSB A1D2Y "Initial release" 2026-11-04 RCSB #