data_A1D36 # _chem_comp.id A1D36 _chem_comp.name "4-[(2R)-2-(difluoromethyl)pyrrolidin-1-yl]-7H-pyrrolo[2,3-d]pyrimidine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C11 H12 F2 N4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2026-09-01 _chem_comp.pdbx_modified_date 2026-10-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 238.237 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1D36 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 15NX _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? _chem_comp.pdbx_comp_type ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1D36 C11 C1 C 0 1 Y N N N N N -46.709 -29.401 5.149 -1.810 0.304 -0.185 C11 A1D36 1 A1D36 C1 C2 C 0 1 N N N N N N -43.919 -31.736 2.292 2.688 -0.501 -0.936 C1 A1D36 2 A1D36 C10 C3 C 0 1 Y N N N N N -48.123 -29.209 4.911 -2.261 1.636 -0.581 C10 A1D36 3 A1D36 C2 C4 C 0 1 N N R N N N -44.422 -30.285 2.227 1.779 -0.387 0.290 C2 A1D36 4 A1D36 C3 C5 C 0 1 N N N N N N -44.769 -29.842 0.803 2.534 0.314 1.439 C3 A1D36 5 A1D36 C4 C6 C 0 1 N N N N N N -46.292 -29.737 0.773 2.061 1.787 1.320 C4 A1D36 6 A1D36 C5 C7 C 0 1 N N N N N N -46.713 -29.550 2.233 0.587 1.608 0.879 C5 A1D36 7 A1D36 C6 C8 C 0 1 Y N N N N N -45.553 -29.766 4.400 -0.565 -0.288 0.076 C6 A1D36 8 A1D36 C7 C9 C 0 1 Y N N N N N -44.295 -29.555 6.347 -1.651 -2.271 0.535 C7 A1D36 9 A1D36 C8 C10 C 0 1 Y N N N N N -46.481 -29.135 6.525 -2.970 -0.483 -0.061 C8 A1D36 10 A1D36 C9 C11 C 0 1 Y N N N N N -48.696 -28.834 6.104 -3.601 1.583 -0.669 C9 A1D36 11 A1D36 F1 F1 F 0 1 N N N N N N -42.813 -31.923 1.570 3.206 0.760 -1.251 F1 A1D36 12 A1D36 F2 F2 F 0 1 N N N N N N -43.669 -32.087 3.549 3.739 -1.381 -0.658 F2 A1D36 13 A1D36 N1 N1 N 0 1 N N N N N N -45.619 -30.078 3.031 0.604 0.444 -0.032 N1 A1D36 14 A1D36 N2 N2 N 0 1 Y N N N N N -44.354 -29.833 5.041 -0.537 -1.569 0.431 N2 A1D36 15 A1D36 N3 N3 N 0 1 Y N N N N N -45.286 -29.205 7.169 -2.839 -1.760 0.296 N3 A1D36 16 A1D36 N4 N4 N 0 1 Y N N N N N -47.705 -28.808 7.072 -4.036 0.320 -0.360 N4 A1D36 17 A1D36 H1 H1 H 0 1 N N N N N N -44.726 -32.367 1.891 2.112 -0.878 -1.781 H1 A1D36 18 A1D36 H12 H2 H 0 1 N N N N N N -48.635 -29.337 3.969 -1.638 2.498 -0.767 H12 A1D36 19 A1D36 H2 H3 H 0 1 N N N N N N -43.621 -29.631 2.602 1.457 -1.379 0.605 H2 A1D36 20 A1D36 H3 H4 H 0 1 N N N N N N -44.420 -30.586 0.072 2.245 -0.107 2.402 H3 A1D36 21 A1D36 H4 H5 H 0 1 N N N N N N -44.311 -28.867 0.581 3.611 0.239 1.294 H4 A1D36 22 A1D36 H5 H6 H 0 1 N N N N N N -46.607 -28.874 0.168 2.122 2.295 2.283 H5 A1D36 23 A1D36 H6 H7 H 0 1 N N N N N N -46.733 -30.656 0.359 2.634 2.321 0.562 H6 A1D36 24 A1D36 H7 H8 H 0 1 N N N N N N -46.868 -28.484 2.453 -0.046 1.404 1.743 H7 A1D36 25 A1D36 H8 H9 H 0 1 N N N N N N -47.640 -30.105 2.439 0.238 2.496 0.353 H8 A1D36 26 A1D36 H9 H10 H 0 1 N N N N N N -43.315 -29.623 6.797 -1.583 -3.310 0.822 H9 A1D36 27 A1D36 H11 H11 H 0 1 N N N N N N -49.739 -28.600 6.259 -4.238 2.410 -0.942 H11 A1D36 28 A1D36 H10 H12 H 0 1 N N N N N N -47.856 -28.583 8.035 -4.964 0.038 -0.354 H10 A1D36 29 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1D36 C4 C3 SING N N 1 A1D36 C4 C5 SING N N 2 A1D36 C3 C2 SING N N 3 A1D36 F1 C1 SING N N 4 A1D36 C2 C1 SING N N 5 A1D36 C2 N1 SING N N 6 A1D36 C5 N1 SING N N 7 A1D36 C1 F2 SING N N 8 A1D36 N1 C6 SING N N 9 A1D36 C6 N2 DOUB Y N 10 A1D36 C6 C11 SING Y N 11 A1D36 C10 C11 SING Y N 12 A1D36 C10 C9 DOUB Y N 13 A1D36 N2 C7 SING Y N 14 A1D36 C11 C8 DOUB Y N 15 A1D36 C9 N4 SING Y N 16 A1D36 C7 N3 DOUB Y N 17 A1D36 C8 N4 SING Y N 18 A1D36 C8 N3 SING Y N 19 A1D36 C1 H1 SING N N 20 A1D36 C10 H12 SING N N 21 A1D36 C2 H2 SING N N 22 A1D36 C3 H3 SING N N 23 A1D36 C3 H4 SING N N 24 A1D36 C4 H5 SING N N 25 A1D36 C4 H6 SING N N 26 A1D36 C5 H7 SING N N 27 A1D36 C5 H8 SING N N 28 A1D36 C7 H9 SING N N 29 A1D36 C9 H11 SING N N 30 A1D36 N4 H10 SING N N 31 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1D36 SMILES ACDLabs 14.52 "FC(F)C1CCCN1c1ncnc2[NH]ccc12" A1D36 InChI InChI 1.06 "InChI=1S/C11H12F2N4/c12-9(13)8-2-1-5-17(8)11-7-3-4-14-10(7)15-6-16-11/h3-4,6,8-9H,1-2,5H2,(H,14,15,16)/t8-/m1/s1" A1D36 InChIKey InChI 1.06 VBAZUODJKJOGRA-MRVPVSSYSA-N A1D36 SMILES_CANONICAL CACTVS 3.385 "FC(F)[C@H]1CCCN1c2ncnc3[nH]ccc23" A1D36 SMILES CACTVS 3.385 "FC(F)[CH]1CCCN1c2ncnc3[nH]ccc23" A1D36 SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1c[nH]c2c1c(ncn2)N3CCC[C@@H]3C(F)F" A1D36 SMILES "OpenEye OEToolkits" 3.1.0.0 "c1c[nH]c2c1c(ncn2)N3CCCC3C(F)F" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1D36 "SYSTEMATIC NAME" ACDLabs 14.52 "4-[(2R)-2-(difluoromethyl)pyrrolidin-1-yl]-7H-pyrrolo[2,3-d]pyrimidine" A1D36 "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "4-[(2~{R})-2-[bis(fluoranyl)methyl]pyrrolidin-1-yl]-7~{H}-pyrrolo[2,3-d]pyrimidine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1D36 "Create component" 2026-09-01 RCSB A1D36 "Initial release" 2026-11-04 RCSB #