data_A1D38 # _chem_comp.id A1D38 _chem_comp.name "{(1r,3r)-3-methyl-1-[(7H-pyrrolo[2,3-d]pyrimidin-4-yl)amino]cyclobutyl}methanol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C12 H16 N4 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2026-09-01 _chem_comp.pdbx_modified_date 2026-10-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 232.282 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1D38 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 15NZ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? _chem_comp.pdbx_comp_type ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1D38 C11 C1 C 0 1 N N N N N N -43.363 -31.584 2.375 3.071 -0.648 0.773 C11 A1D38 1 A1D38 C12 C2 C 0 1 N N N N N N -42.256 -29.168 2.477 1.989 1.682 0.791 C12 A1D38 2 A1D38 C1 C3 C 0 1 N N N N N N -43.794 -33.010 0.189 4.393 -1.574 -1.223 C1 A1D38 3 A1D38 C10 C4 C 0 1 Y N N N N N -48.385 -28.614 5.149 -3.655 -1.530 0.936 C10 A1D38 4 A1D38 C2 C5 C 0 1 N N N N N N -44.151 -31.831 1.080 3.015 -1.300 -0.618 C2 A1D38 5 A1D38 C3 C6 C 0 1 N N N N N N -43.732 -30.418 0.658 2.372 0.005 -1.117 C3 A1D38 6 A1D38 C4 C7 C 0 1 N N N N N N -43.468 -30.063 2.139 1.888 0.227 0.327 C4 A1D38 7 A1D38 C5 C8 C 0 1 Y N N N N N -44.948 -29.430 4.128 -0.548 0.101 -0.043 C5 A1D38 8 A1D38 C6 C9 C 0 1 Y N N N N N -44.181 -29.511 6.325 -1.533 1.525 -1.568 C6 A1D38 9 A1D38 C7 C10 C 0 1 Y N N N N N -46.345 -29.036 6.041 -2.930 0.075 -0.454 C7 A1D38 10 A1D38 C8 C11 C 0 1 Y N N N N N -46.244 -29.118 4.624 -1.814 -0.438 0.233 C8 A1D38 11 A1D38 C9 C12 C 0 1 Y N N N N N -47.550 -28.844 4.080 -2.326 -1.474 1.127 C9 A1D38 12 A1D38 N1 N1 N 0 1 N N N N N N -44.701 -29.533 2.749 0.579 -0.370 0.606 N1 A1D38 13 A1D38 N2 N2 N 0 1 Y N N N N N -43.940 -29.617 5.016 -0.460 1.075 -0.943 N2 A1D38 14 A1D38 N3 N3 N 0 1 Y N N N N N -45.334 -29.230 6.932 -2.738 1.048 -1.344 N3 A1D38 15 A1D38 N4 N4 N 0 1 Y N N N N N -47.657 -28.729 6.324 -4.027 -0.611 -0.010 N4 A1D38 16 A1D38 O1 O1 O 0 1 N N N N N N -41.640 -29.424 3.721 1.488 1.793 2.125 O1 A1D38 17 A1D38 H13 H1 H 0 1 N N N N N N -43.871 -31.935 3.285 2.826 -1.332 1.586 H13 A1D38 18 A1D38 H12 H2 H 0 1 N N N N N N -42.334 -31.972 2.357 3.986 -0.085 0.955 H12 A1D38 19 A1D38 H15 H3 H 0 1 N N N N N N -41.501 -29.308 1.690 3.032 1.999 0.767 H15 A1D38 20 A1D38 H14 H4 H 0 1 N N N N N N -42.596 -28.122 2.476 1.401 2.316 0.128 H14 A1D38 21 A1D38 H2 H5 H 0 1 N N N N N N -44.169 -33.939 0.642 4.949 -2.248 -0.570 H2 A1D38 22 A1D38 H3 H6 H 0 1 N N N N N N -44.253 -32.873 -0.801 4.275 -2.034 -2.204 H3 A1D38 23 A1D38 H1 H7 H 0 1 N N N N N N -42.701 -33.070 0.081 4.938 -0.636 -1.325 H1 A1D38 24 A1D38 H10 H8 H 0 1 N N N N N N -49.438 -28.381 5.084 -4.328 -2.202 1.448 H10 A1D38 25 A1D38 H4 H9 H 0 1 N N N N N N -45.228 -31.845 1.302 2.351 -2.163 -0.670 H4 A1D38 26 A1D38 H5 H10 H 0 1 N N N N N N -42.836 -30.386 0.021 3.096 0.748 -1.453 H5 A1D38 27 A1D38 H6 H11 H 0 1 N N N N N N -44.536 -29.831 0.191 1.563 -0.152 -1.831 H6 A1D38 28 A1D38 H8 H12 H 0 1 N N N N N N -43.334 -29.674 6.975 -1.416 2.313 -2.297 H8 A1D38 29 A1D38 H9 H13 H 0 1 N N N N N N -47.821 -28.823 3.035 -1.748 -2.078 1.811 H9 A1D38 30 A1D38 H7 H14 H 0 1 N N N N N N -44.794 -28.603 2.393 0.504 -1.095 1.245 H7 A1D38 31 A1D38 H11 H15 H 0 1 N N N N N N -48.031 -28.607 7.243 -4.935 -0.468 -0.319 H11 A1D38 32 A1D38 H16 H16 H 0 1 N N N N N N -40.909 -28.829 3.841 1.522 2.690 2.484 H16 A1D38 33 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1D38 C1 C2 SING N N 1 A1D38 C3 C2 SING N N 2 A1D38 C3 C4 SING N N 3 A1D38 C2 C11 SING N N 4 A1D38 C4 C11 SING N N 5 A1D38 C4 C12 SING N N 6 A1D38 C4 N1 SING N N 7 A1D38 C12 O1 SING N N 8 A1D38 N1 C5 SING N N 9 A1D38 C9 C8 SING Y N 10 A1D38 C9 C10 DOUB Y N 11 A1D38 C5 C8 DOUB Y N 12 A1D38 C5 N2 SING Y N 13 A1D38 C8 C7 SING Y N 14 A1D38 N2 C6 DOUB Y N 15 A1D38 C10 N4 SING Y N 16 A1D38 C7 N4 SING Y N 17 A1D38 C7 N3 DOUB Y N 18 A1D38 C6 N3 SING Y N 19 A1D38 C11 H13 SING N N 20 A1D38 C11 H12 SING N N 21 A1D38 C12 H15 SING N N 22 A1D38 C12 H14 SING N N 23 A1D38 C1 H2 SING N N 24 A1D38 C1 H3 SING N N 25 A1D38 C1 H1 SING N N 26 A1D38 C10 H10 SING N N 27 A1D38 C2 H4 SING N N 28 A1D38 C3 H5 SING N N 29 A1D38 C3 H6 SING N N 30 A1D38 C6 H8 SING N N 31 A1D38 C9 H9 SING N N 32 A1D38 N1 H7 SING N N 33 A1D38 N4 H11 SING N N 34 A1D38 O1 H16 SING N N 35 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1D38 SMILES ACDLabs 14.52 "CC1CC(CO)(C1)Nc1ncnc2[NH]ccc21" A1D38 InChI InChI 1.06 "InChI=1S/C12H16N4O/c1-8-4-12(5-8,6-17)16-11-9-2-3-13-10(9)14-7-15-11/h2-3,7-8,17H,4-6H2,1H3,(H2,13,14,15,16)/t8-,12-" A1D38 InChIKey InChI 1.06 WZCBWJBXILHLQH-ITWVYHRLSA-N A1D38 SMILES_CANONICAL CACTVS 3.385 "C[C@H]1C[C@@](CO)(C1)Nc2ncnc3[nH]ccc23" A1D38 SMILES CACTVS 3.385 "C[CH]1C[C](CO)(C1)Nc2ncnc3[nH]ccc23" A1D38 SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "CC1CC(C1)(CO)Nc2c3cc[nH]c3ncn2" A1D38 SMILES "OpenEye OEToolkits" 3.1.0.0 "CC1CC(C1)(CO)Nc2c3cc[nH]c3ncn2" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1D38 "SYSTEMATIC NAME" ACDLabs 14.52 "{(1r,3r)-3-methyl-1-[(7H-pyrrolo[2,3-d]pyrimidin-4-yl)amino]cyclobutyl}methanol" A1D38 "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "[3-methyl-1-(7~{H}-pyrrolo[2,3-d]pyrimidin-4-ylamino)cyclobutyl]methanol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1D38 "Create component" 2026-09-01 RCSB A1D38 "Initial release" 2026-11-04 RCSB #