data_A1D3D # _chem_comp.id A1D3D _chem_comp.name "[(2R)-1-(7H-pyrrolo[2,3-d]pyrimidin-4-yl)pyrrolidin-2-yl]methyl cyclohexylcarbamate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C18 H25 N5 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2026-09-01 _chem_comp.pdbx_modified_date 2026-10-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 343.423 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1D3D _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 15MY _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? _chem_comp.pdbx_comp_type ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1D3D C13 C1 C 0 1 Y N N N N N -45.410 -29.340 4.247 2.317 0.066 -0.616 C13 A1D3D 1 A1D3D C18 C2 C 0 1 Y N N N N N -46.623 -29.189 4.970 2.548 1.288 0.036 C18 A1D3D 2 A1D3D C17 C3 C 0 1 Y N N N N N -48.013 -28.956 4.672 3.468 1.751 1.073 C17 A1D3D 3 A1D3D C16 C4 C 0 1 Y N N N N N -48.680 -28.921 5.869 3.199 3.050 1.278 C16 A1D3D 4 A1D3D C15 C5 C 0 1 Y N N N N N -46.501 -29.289 6.383 1.762 2.400 -0.317 C15 A1D3D 5 A1D3D C11 C6 C 0 1 N N N N N N -46.037 -29.493 0.599 3.086 -3.418 -0.722 C11 A1D3D 6 A1D3D C12 C7 C 0 1 N N N N N N -46.503 -29.674 2.044 3.044 -2.032 -1.412 C12 A1D3D 7 A1D3D C1 C8 C 0 1 N N N N N N -45.110 -32.833 1.848 -0.955 -0.551 0.637 C1 A1D3D 8 A1D3D C10 C9 C 0 1 N N N N N N -44.510 -29.543 0.646 2.201 -3.174 0.528 C10 A1D3D 9 A1D3D C14 C10 C 0 1 Y N N N N N -44.296 -29.623 6.273 0.648 1.084 -1.841 C14 A1D3D 10 A1D3D C2 C11 C 0 1 N N N N N N -45.327 -33.541 -0.564 -3.251 -0.004 0.029 C2 A1D3D 11 A1D3D C3 C12 C 0 1 N N N N N N -45.064 -35.060 -0.563 -3.967 0.311 -1.286 C3 A1D3D 12 A1D3D C4 C13 C 0 1 N N N N N N -44.432 -35.508 -1.891 -5.316 0.969 -0.986 C4 A1D3D 13 A1D3D C5 C14 C 0 1 N N N N N N -45.293 -35.081 -3.091 -6.175 0.015 -0.154 C5 A1D3D 14 A1D3D C6 C15 C 0 1 N N N N N N -45.556 -33.566 -3.086 -5.458 -0.301 1.161 C6 A1D3D 15 A1D3D C7 C16 C 0 1 N N N N N N -46.199 -33.120 -1.764 -4.109 -0.958 0.861 C7 A1D3D 16 A1D3D C8 C17 C 0 1 N N N N N N -43.634 -31.059 2.500 1.267 -0.999 1.383 C8 A1D3D 17 A1D3D C9 C18 C 0 1 N N R N N N -44.150 -29.656 2.134 2.534 -1.716 0.909 C9 A1D3D 18 A1D3D N1 N1 N 0 1 N N N N N N -45.865 -33.048 0.703 -1.959 -0.634 -0.258 N1 A1D3D 19 A1D3D N2 N2 N 0 1 N N N N N N -45.361 -29.260 2.843 3.060 -1.057 -0.300 N2 A1D3D 20 A1D3D N3 N3 N 0 1 Y N N N N N -44.258 -29.552 4.939 1.363 0.015 -1.541 N3 A1D3D 21 A1D3D N4 N4 N 0 1 Y N N N N N -45.352 -29.509 7.080 0.830 2.249 -1.257 N4 A1D3D 22 A1D3D N5 N5 N 0 1 Y N N N N N -47.772 -29.122 6.895 2.181 3.450 0.452 N5 A1D3D 23 A1D3D O1 O1 O 0 1 N N N N N N -45.302 -33.313 2.962 -1.121 0.047 1.682 O1 A1D3D 24 A1D3D O2 O2 O 0 1 N N N N N N -44.122 -31.982 1.539 0.231 -1.130 0.373 O2 A1D3D 25 A1D3D H25 H1 H 0 1 N N N N N N -48.447 -28.832 3.691 4.219 1.161 1.577 H25 A1D3D 26 A1D3D H24 H2 H 0 1 N N N N N N -49.741 -28.762 5.992 3.709 3.686 1.987 H24 A1D3D 27 A1D3D H18 H3 H 0 1 N N N N N N -46.377 -28.524 0.205 2.653 -4.186 -1.363 H18 A1D3D 28 A1D3D H19 H4 H 0 1 N N N N N N -46.428 -30.303 -0.034 4.104 -3.681 -0.435 H19 A1D3D 29 A1D3D H21 H5 H 0 1 N N N N N N -47.377 -29.039 2.254 3.920 -1.898 -2.047 H21 A1D3D 30 A1D3D H20 H6 H 0 1 N N N N N N -46.757 -30.726 2.243 2.130 -1.926 -1.996 H20 A1D3D 31 A1D3D H16 H7 H 0 1 N N N N N N -44.137 -30.417 0.092 1.145 -3.275 0.279 H16 A1D3D 32 A1D3D H17 H8 H 0 1 N N N N N N -44.082 -28.626 0.215 2.475 -3.855 1.334 H17 A1D3D 33 A1D3D H22 H9 H 0 1 N N N N N N -43.348 -29.795 6.761 -0.117 0.999 -2.599 H22 A1D3D 34 A1D3D H2 H10 H 0 1 N N N N N N -44.349 -33.059 -0.710 -3.089 0.919 0.585 H2 A1D3D 35 A1D3D H4 H11 H 0 1 N N N N N N -46.017 -35.590 -0.421 -3.355 0.991 -1.879 H4 A1D3D 36 A1D3D H3 H12 H 0 1 N N N N N N -44.380 -35.307 0.263 -4.129 -0.612 -1.842 H3 A1D3D 37 A1D3D H5 H13 H 0 1 N N N N N N -44.336 -36.604 -1.891 -5.154 1.892 -0.429 H5 A1D3D 38 A1D3D H6 H14 H 0 1 N N N N N N -43.435 -35.053 -1.985 -5.826 1.194 -1.923 H6 A1D3D 39 A1D3D H8 H15 H 0 1 N N N N N N -46.256 -35.611 -3.046 -7.135 0.484 0.060 H8 A1D3D 40 A1D3D H7 H16 H 0 1 N N N N N N -44.769 -35.350 -4.020 -6.336 -0.908 -0.710 H7 A1D3D 41 A1D3D H9 H17 H 0 1 N N N N N N -44.602 -33.035 -3.218 -5.296 0.622 1.718 H9 A1D3D 42 A1D3D H10 H18 H 0 1 N N N N N N -46.232 -33.316 -3.917 -6.070 -0.980 1.754 H10 A1D3D 43 A1D3D H11 H19 H 0 1 N N N N N N -46.306 -32.025 -1.766 -4.271 -1.882 0.305 H11 A1D3D 44 A1D3D H12 H20 H 0 1 N N N N N N -47.191 -33.585 -1.670 -3.599 -1.184 1.798 H12 A1D3D 45 A1D3D H14 H21 H 0 1 N N N N N N -43.996 -31.338 3.500 0.924 -1.447 2.315 H14 A1D3D 46 A1D3D H13 H22 H 0 1 N N N N N N -42.534 -31.063 2.494 1.486 0.056 1.545 H13 A1D3D 47 A1D3D H15 H23 H 0 1 N N N N N N -43.352 -28.931 2.350 3.285 -1.701 1.699 H15 A1D3D 48 A1D3D H1 H24 H 0 1 N N N N N N -46.845 -32.852 0.748 -1.827 -1.112 -1.092 H1 A1D3D 49 A1D3D H23 H25 H 0 1 N N N N N N -48.004 -29.143 7.868 1.811 4.346 0.419 H23 A1D3D 50 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1D3D C5 C6 SING N N 1 A1D3D C5 C4 SING N N 2 A1D3D C6 C7 SING N N 3 A1D3D C4 C3 SING N N 4 A1D3D C7 C2 SING N N 5 A1D3D C2 C3 SING N N 6 A1D3D C2 N1 SING N N 7 A1D3D C11 C10 SING N N 8 A1D3D C11 C12 SING N N 9 A1D3D C10 C9 SING N N 10 A1D3D N1 C1 SING N N 11 A1D3D O2 C1 SING N N 12 A1D3D O2 C8 SING N N 13 A1D3D C1 O1 DOUB N N 14 A1D3D C12 N2 SING N N 15 A1D3D C9 C8 SING N N 16 A1D3D C9 N2 SING N N 17 A1D3D N2 C13 SING N N 18 A1D3D C13 N3 DOUB Y N 19 A1D3D C13 C18 SING Y N 20 A1D3D C17 C18 SING Y N 21 A1D3D C17 C16 DOUB Y N 22 A1D3D N3 C14 SING Y N 23 A1D3D C18 C15 DOUB Y N 24 A1D3D C16 N5 SING Y N 25 A1D3D C14 N4 DOUB Y N 26 A1D3D C15 N5 SING Y N 27 A1D3D C15 N4 SING Y N 28 A1D3D C17 H25 SING N N 29 A1D3D C16 H24 SING N N 30 A1D3D C11 H18 SING N N 31 A1D3D C11 H19 SING N N 32 A1D3D C12 H21 SING N N 33 A1D3D C12 H20 SING N N 34 A1D3D C10 H16 SING N N 35 A1D3D C10 H17 SING N N 36 A1D3D C14 H22 SING N N 37 A1D3D C2 H2 SING N N 38 A1D3D C3 H4 SING N N 39 A1D3D C3 H3 SING N N 40 A1D3D C4 H5 SING N N 41 A1D3D C4 H6 SING N N 42 A1D3D C5 H8 SING N N 43 A1D3D C5 H7 SING N N 44 A1D3D C6 H9 SING N N 45 A1D3D C6 H10 SING N N 46 A1D3D C7 H11 SING N N 47 A1D3D C7 H12 SING N N 48 A1D3D C8 H14 SING N N 49 A1D3D C8 H13 SING N N 50 A1D3D C9 H15 SING N N 51 A1D3D N1 H1 SING N N 52 A1D3D N5 H23 SING N N 53 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1D3D SMILES ACDLabs 14.52 "O=C(NC1CCCCC1)OCC1CCCN1c1ncnc2[NH]ccc12" A1D3D InChI InChI 1.06 "InChI=1S/C18H25N5O2/c24-18(22-13-5-2-1-3-6-13)25-11-14-7-4-10-23(14)17-15-8-9-19-16(15)20-12-21-17/h8-9,12-14H,1-7,10-11H2,(H,22,24)(H,19,20,21)/t14-/m1/s1" A1D3D InChIKey InChI 1.06 NJRKBKDUUQNFMV-CQSZACIVSA-N A1D3D SMILES_CANONICAL CACTVS 3.385 "O=C(NC1CCCCC1)OC[C@H]2CCCN2c3ncnc4[nH]ccc34" A1D3D SMILES CACTVS 3.385 "O=C(NC1CCCCC1)OC[CH]2CCCN2c3ncnc4[nH]ccc34" A1D3D SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1c[nH]c2c1c(ncn2)N3CCC[C@@H]3COC(=O)NC4CCCCC4" A1D3D SMILES "OpenEye OEToolkits" 3.1.0.0 "c1c[nH]c2c1c(ncn2)N3CCCC3COC(=O)NC4CCCCC4" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1D3D "SYSTEMATIC NAME" ACDLabs 14.52 "[(2R)-1-(7H-pyrrolo[2,3-d]pyrimidin-4-yl)pyrrolidin-2-yl]methyl cyclohexylcarbamate" A1D3D "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "[(2~{R})-1-(7~{H}-pyrrolo[2,3-d]pyrimidin-4-yl)pyrrolidin-2-yl]methyl ~{N}-cyclohexylcarbamate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1D3D "Create component" 2026-09-01 RCSB A1D3D "Initial release" 2026-11-04 RCSB #