data_A1D3G # _chem_comp.id A1D3G _chem_comp.name "4-[(3S)-3-{[(1R,3S)-3-methoxycyclohexyl]oxy}pyrrolidin-1-yl]-7H-pyrrolo[2,3-d]pyrimidine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C17 H24 N4 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2026-09-01 _chem_comp.pdbx_modified_date 2026-10-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 316.398 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1D3G _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 15KH _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? _chem_comp.pdbx_comp_type ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1D3G C13 C1 C 0 1 Y N N N N N -48.622 -28.838 5.722 5.977 1.545 -0.568 C13 A1D3G 1 A1D3G C17 C2 C 0 1 N N N N N N -44.409 -32.880 -1.068 -4.009 -0.858 0.181 C17 A1D3G 2 A1D3G C16 C3 C 0 1 N N N N N N -44.181 -29.507 1.787 0.604 -0.679 -0.369 C16 A1D3G 3 A1D3G C15 C4 C 0 1 Y N N N N N -46.601 -29.080 4.731 4.193 0.200 -0.285 C15 A1D3G 4 A1D3G C11 C5 C 0 1 Y N N N N N -44.210 -29.281 5.950 4.031 -2.315 0.622 C11 A1D3G 5 A1D3G C12 C6 C 0 1 Y N N N N N -46.417 -29.059 6.131 5.349 -0.501 0.104 C12 A1D3G 6 A1D3G C1 C7 C 0 1 N N N N N N -42.627 -33.387 -2.909 -7.433 -1.332 -1.023 C1 A1D3G 7 A1D3G C10 C8 C 0 1 Y N N N N N -45.407 -29.226 3.967 2.950 -0.445 -0.188 C10 A1D3G 8 A1D3G C14 C9 C 0 1 Y N N N N N -48.018 -28.933 4.494 4.642 1.524 -0.711 C14 A1D3G 9 A1D3G C2 C10 C 0 1 N N S N N N -44.836 -33.915 -2.121 -5.374 -0.349 -0.286 C2 A1D3G 10 A1D3G C3 C11 C 0 1 N N N N N N -45.564 -35.077 -1.415 -5.758 0.894 0.518 C3 A1D3G 11 A1D3G C4 C12 C 0 1 N N N N N N -46.819 -34.540 -0.716 -4.707 1.985 0.303 C4 A1D3G 12 A1D3G C5 C13 C 0 1 N N N N N N -46.493 -33.393 0.255 -3.341 1.477 0.770 C5 A1D3G 13 A1D3G C6 C14 C 0 1 N N R N N N -45.613 -32.285 -0.353 -2.958 0.233 -0.035 C6 A1D3G 14 A1D3G C7 C15 C 0 1 N N S N N N -44.760 -30.108 0.503 -0.578 0.321 -0.311 C7 A1D3G 15 A1D3G C8 C16 C 0 1 N N N N N N -46.076 -29.368 0.327 0.019 1.518 0.463 C8 A1D3G 16 A1D3G C9 C17 C 0 1 N N N N N N -46.576 -29.280 1.767 1.544 1.388 0.291 C9 A1D3G 17 A1D3G N1 N1 N 0 1 N N N N N N -45.370 -29.275 2.580 1.785 0.202 -0.559 N1 A1D3G 18 A1D3G N2 N2 N 0 1 Y N N N N N -44.222 -29.316 4.614 2.921 -1.694 0.268 N2 A1D3G 19 A1D3G N3 N3 N 0 1 Y N N N N N -45.236 -29.169 6.787 5.217 -1.750 0.549 N3 A1D3G 20 A1D3G N4 N4 N 0 1 Y N N N N N -47.654 -28.930 6.706 6.412 0.338 -0.085 N4 A1D3G 21 A1D3G O1 O1 O 0 1 N N N N N N -43.658 -34.351 -2.775 -6.356 -1.368 -0.084 O1 A1D3G 22 A1D3G O2 O2 O 0 1 N N N N N N -45.062 -31.494 0.690 -1.682 -0.241 0.401 O2 A1D3G 23 A1D3G H19 H1 H 0 1 N N N N N N -49.681 -28.712 5.893 6.614 2.385 -0.804 H19 A1D3G 24 A1D3G H24 H2 H 0 1 N N N N N N -43.759 -33.370 -0.328 -4.058 -1.111 1.240 H24 A1D3G 25 A1D3G H23 H3 H 0 1 N N N N N N -43.853 -32.072 -1.566 -3.735 -1.744 -0.392 H23 A1D3G 26 A1D3G H22 H4 H 0 1 N N N N N N -43.500 -30.213 2.286 0.684 -1.234 0.566 H22 A1D3G 27 A1D3G H21 H5 H 0 1 N N N N N N -43.649 -28.567 1.582 0.493 -1.361 -1.212 H21 A1D3G 28 A1D3G H17 H6 H 0 1 N N N N N N -43.236 -29.353 6.411 3.963 -3.329 0.988 H17 A1D3G 29 A1D3G H2 H7 H 0 1 N N N N N N -41.769 -33.837 -3.429 -7.040 -1.458 -2.032 H2 A1D3G 30 A1D3G H1 H8 H 0 1 N N N N N N -42.999 -32.531 -3.490 -8.134 -2.136 -0.803 H1 A1D3G 31 A1D3G H3 H9 H 0 1 N N N N N N -42.313 -33.045 -1.912 -7.945 -0.372 -0.951 H3 A1D3G 32 A1D3G H20 H10 H 0 1 N N N N N N -48.509 -28.903 3.532 4.020 2.330 -1.071 H20 A1D3G 33 A1D3G H4 H11 H 0 1 N N N N N N -45.526 -33.440 -2.834 -5.325 -0.096 -1.345 H4 A1D3G 34 A1D3G H6 H12 H 0 1 N N N N N N -45.853 -35.835 -2.158 -6.731 1.256 0.186 H6 A1D3G 35 A1D3G H5 H13 H 0 1 N N N N N N -44.894 -35.531 -0.670 -5.807 0.641 1.578 H5 A1D3G 36 A1D3G H7 H14 H 0 1 N N N N N N -47.520 -34.171 -1.479 -4.658 2.238 -0.756 H7 A1D3G 37 A1D3G H8 H15 H 0 1 N N N N N N -47.289 -35.359 -0.152 -4.980 2.871 0.876 H8 A1D3G 38 A1D3G H9 H16 H 0 1 N N N N N N -47.440 -32.940 0.585 -2.592 2.254 0.616 H9 A1D3G 39 A1D3G H10 H17 H 0 1 N N N N N N -45.966 -33.815 1.124 -3.390 1.224 1.829 H10 A1D3G 40 A1D3G H11 H18 H 0 1 N N N N N N -46.206 -31.678 -1.052 -2.909 0.486 -1.094 H11 A1D3G 41 A1D3G H12 H19 H 0 1 N N N N N N -44.089 -29.934 -0.351 -0.881 0.620 -1.315 H12 A1D3G 42 A1D3G H14 H20 H 0 1 N N N N N N -45.919 -28.369 -0.105 -0.331 2.458 0.036 H14 A1D3G 43 A1D3G H13 H21 H 0 1 N N N N N N -46.774 -29.936 -0.306 -0.249 1.459 1.518 H13 A1D3G 44 A1D3G H15 H22 H 0 1 N N N N N N -47.151 -28.355 1.922 1.940 2.280 -0.195 H15 A1D3G 45 A1D3G H16 H23 H 0 1 N N N N N N -47.205 -30.148 2.012 2.017 1.250 1.263 H16 A1D3G 46 A1D3G H18 H24 H 0 1 N N N N N N -47.831 -28.906 7.690 7.338 0.112 0.096 H18 A1D3G 47 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1D3G C1 O1 SING N N 1 A1D3G O1 C2 SING N N 2 A1D3G C2 C3 SING N N 3 A1D3G C2 C17 SING N N 4 A1D3G C3 C4 SING N N 5 A1D3G C17 C6 SING N N 6 A1D3G C4 C5 SING N N 7 A1D3G C6 C5 SING N N 8 A1D3G C6 O2 SING N N 9 A1D3G C8 C7 SING N N 10 A1D3G C8 C9 SING N N 11 A1D3G C7 O2 SING N N 12 A1D3G C7 C16 SING N N 13 A1D3G C9 N1 SING N N 14 A1D3G C16 N1 SING N N 15 A1D3G N1 C10 SING N N 16 A1D3G C10 N2 DOUB Y N 17 A1D3G C10 C15 SING Y N 18 A1D3G C14 C15 SING Y N 19 A1D3G C14 C13 DOUB Y N 20 A1D3G N2 C11 SING Y N 21 A1D3G C15 C12 DOUB Y N 22 A1D3G C13 N4 SING Y N 23 A1D3G C11 N3 DOUB Y N 24 A1D3G C12 N4 SING Y N 25 A1D3G C12 N3 SING Y N 26 A1D3G C13 H19 SING N N 27 A1D3G C17 H24 SING N N 28 A1D3G C17 H23 SING N N 29 A1D3G C16 H22 SING N N 30 A1D3G C16 H21 SING N N 31 A1D3G C11 H17 SING N N 32 A1D3G C1 H2 SING N N 33 A1D3G C1 H1 SING N N 34 A1D3G C1 H3 SING N N 35 A1D3G C14 H20 SING N N 36 A1D3G C2 H4 SING N N 37 A1D3G C3 H6 SING N N 38 A1D3G C3 H5 SING N N 39 A1D3G C4 H7 SING N N 40 A1D3G C4 H8 SING N N 41 A1D3G C5 H9 SING N N 42 A1D3G C5 H10 SING N N 43 A1D3G C6 H11 SING N N 44 A1D3G C7 H12 SING N N 45 A1D3G C8 H14 SING N N 46 A1D3G C8 H13 SING N N 47 A1D3G C9 H15 SING N N 48 A1D3G C9 H16 SING N N 49 A1D3G N4 H18 SING N N 50 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1D3G SMILES ACDLabs 14.52 "COC1CCCC(C1)OC1CCN(C1)c1ncnc2[NH]ccc12" A1D3G InChI InChI 1.06 "InChI=1S/C17H24N4O2/c1-22-12-3-2-4-13(9-12)23-14-6-8-21(10-14)17-15-5-7-18-16(15)19-11-20-17/h5,7,11-14H,2-4,6,8-10H2,1H3,(H,18,19,20)/t12-,13+,14-/m0/s1" A1D3G InChIKey InChI 1.06 RSJJWHBPCCNKFZ-MJBXVCDLSA-N A1D3G SMILES_CANONICAL CACTVS 3.385 "CO[C@H]1CCC[C@H](C1)O[C@H]2CCN(C2)c3ncnc4[nH]ccc34" A1D3G SMILES CACTVS 3.385 "CO[CH]1CCC[CH](C1)O[CH]2CCN(C2)c3ncnc4[nH]ccc34" A1D3G SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "CO[C@H]1CCC[C@H](C1)O[C@H]2CCN(C2)c3c4cc[nH]c4ncn3" A1D3G SMILES "OpenEye OEToolkits" 3.1.0.0 "COC1CCCC(C1)OC2CCN(C2)c3c4cc[nH]c4ncn3" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1D3G "SYSTEMATIC NAME" ACDLabs 14.52 "4-[(3S)-3-{[(1R,3S)-3-methoxycyclohexyl]oxy}pyrrolidin-1-yl]-7H-pyrrolo[2,3-d]pyrimidine" A1D3G "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "4-[(3~{S})-3-[(1~{R},3~{S})-3-methoxycyclohexyl]oxypyrrolidin-1-yl]-7~{H}-pyrrolo[2,3-d]pyrimidine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1D3G "Create component" 2026-09-01 RCSB A1D3G "Initial release" 2026-11-04 RCSB #