data_A1D3L # _chem_comp.id A1D3L _chem_comp.name "N-{[(1S,2R)-2-hydroxycyclohexyl]methyl}-7H-pyrrolo[2,3-d]pyrimidine-4-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C14 H18 N4 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2026-09-01 _chem_comp.pdbx_modified_date 2026-10-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 274.318 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1D3L _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 15KZ _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? _chem_comp.pdbx_comp_type ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1D3L C13 C1 C 0 1 Y N N N N N -48.126 -29.008 4.578 3.734 1.603 -0.456 C13 A1D3L 1 A1D3L C11 C2 C 0 1 Y N N N N N -46.620 -29.173 6.317 4.328 -0.543 0.109 C11 A1D3L 2 A1D3L C12 C3 C 0 1 Y N N N N N -48.792 -28.809 5.767 5.075 1.492 -0.470 C12 A1D3L 3 A1D3L C1 C4 C 0 1 N N N N N N -45.480 -29.609 2.712 0.713 0.590 -0.079 C1 A1D3L 4 A1D3L C10 C5 C 0 1 Y N N N N N -44.421 -29.570 6.262 2.899 -2.267 0.626 C10 A1D3L 5 A1D3L C14 C6 C 0 1 Y N N N N N -46.739 -29.242 4.903 3.204 0.298 -0.083 C14 A1D3L 6 A1D3L C2 C7 C 0 1 N N N N N N -44.008 -29.629 0.720 -1.707 0.877 -0.077 C2 A1D3L 7 A1D3L C3 C8 C 0 1 N N S N N N -44.107 -28.263 0.003 -2.953 0.032 0.194 C3 A1D3L 8 A1D3L C4 C9 C 0 1 N N N N N N -43.106 -27.237 0.575 -3.058 -1.075 -0.857 C4 A1D3L 9 A1D3L C5 C10 C 0 1 N N N N N N -43.181 -25.884 -0.150 -4.304 -1.919 -0.586 C5 A1D3L 10 A1D3L C6 C11 C 0 1 N N N N N N -44.613 -25.332 -0.156 -5.548 -1.031 -0.656 C6 A1D3L 11 A1D3L C7 C12 C 0 1 N N N N N N -45.589 -26.356 -0.749 -5.443 0.076 0.395 C7 A1D3L 12 A1D3L C8 C13 C 0 1 N N R N N N -45.540 -27.673 0.042 -4.197 0.921 0.124 C8 A1D3L 13 A1D3L C9 C14 C 0 1 Y N N N N N -45.521 -29.502 4.211 1.923 -0.242 0.107 C9 A1D3L 14 A1D3L N1 N1 N 0 1 N N N N N N -44.265 -29.538 2.150 -0.509 0.054 0.107 N1 A1D3L 15 A1D3L N2 N2 N 0 1 Y N N N N N -44.379 -29.659 4.930 1.825 -1.523 0.459 N2 A1D3L 16 A1D3L N3 N3 N 0 1 Y N N N N N -45.479 -29.336 7.040 4.122 -1.804 0.459 N3 A1D3L 17 A1D3L N4 N4 N 0 1 Y N N N N N -47.881 -28.911 6.807 5.441 0.216 -0.135 N4 A1D3L 18 A1D3L O1 O1 O 0 1 N N N N N N -46.517 -29.757 2.056 0.821 1.758 -0.401 O1 A1D3L 19 A1D3L O2 O2 O 0 1 N N N N N N -46.499 -28.561 -0.505 -4.099 1.955 1.106 O2 A1D3L 20 A1D3L H18 H1 H 0 1 N N N N N N -48.560 -28.992 3.589 3.161 2.492 -0.675 H18 A1D3L 21 A1D3L H17 H2 H 0 1 N N N N N N -49.848 -28.607 5.872 5.761 2.290 -0.711 H17 A1D3L 22 A1D3L H15 H3 H 0 1 N N N N N N -43.480 -29.704 6.774 2.773 -3.300 0.912 H15 A1D3L 23 A1D3L H2 H4 H 0 1 N N N N N N -44.744 -30.314 0.274 -1.737 1.251 -1.101 H2 A1D3L 24 A1D3L H3 H5 H 0 1 N N N N N N -42.995 -30.031 0.570 -1.680 1.718 0.616 H3 A1D3L 25 A1D3L H4 H6 H 0 1 N N N N N N -43.847 -28.425 -1.053 -2.881 -0.414 1.186 H4 A1D3L 26 A1D3L H6 H7 H 0 1 N N N N N N -42.088 -27.639 0.469 -3.130 -0.628 -1.849 H6 A1D3L 27 A1D3L H5 H8 H 0 1 N N N N N N -43.330 -27.080 1.641 -2.172 -1.708 -0.807 H5 A1D3L 28 A1D3L H8 H9 H 0 1 N N N N N N -42.843 -26.015 -1.189 -4.379 -2.708 -1.334 H8 A1D3L 29 A1D3L H7 H10 H 0 1 N N N N N N -42.523 -25.167 0.362 -4.232 -2.366 0.406 H7 A1D3L 30 A1D3L H10 H11 H 0 1 N N N N N N -44.643 -24.413 -0.760 -5.620 -0.585 -1.648 H10 A1D3L 31 A1D3L H9 H12 H 0 1 N N N N N N -44.915 -25.102 0.876 -6.436 -1.633 -0.463 H9 A1D3L 32 A1D3L H12 H13 H 0 1 N N N N N N -46.610 -25.948 -0.708 -6.329 0.709 0.345 H12 A1D3L 33 A1D3L H11 H14 H 0 1 N N N N N N -45.314 -26.553 -1.796 -5.371 -0.370 1.387 H11 A1D3L 34 A1D3L H13 H15 H 0 1 N N N N N N -45.790 -27.454 1.091 -4.269 1.367 -0.868 H13 A1D3L 35 A1D3L H1 H16 H 0 1 N N N N N N -43.479 -29.414 2.756 -0.596 -0.878 0.363 H1 A1D3L 36 A1D3L H16 H17 H 0 1 N N N N N N -48.107 -28.809 7.776 6.356 -0.103 -0.078 H16 A1D3L 37 A1D3L H14 H18 H 0 1 N N N N N N -46.768 -29.185 0.159 -4.855 2.558 1.118 H14 A1D3L 38 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1D3L C7 C6 SING N N 1 A1D3L C7 C8 SING N N 2 A1D3L O2 C8 SING N N 3 A1D3L C6 C5 SING N N 4 A1D3L C5 C4 SING N N 5 A1D3L C3 C8 SING N N 6 A1D3L C3 C4 SING N N 7 A1D3L C3 C2 SING N N 8 A1D3L C2 N1 SING N N 9 A1D3L O1 C1 DOUB N N 10 A1D3L N1 C1 SING N N 11 A1D3L C1 C9 SING N N 12 A1D3L C9 C14 DOUB Y N 13 A1D3L C9 N2 SING Y N 14 A1D3L C13 C14 SING Y N 15 A1D3L C13 C12 DOUB Y N 16 A1D3L C14 C11 SING Y N 17 A1D3L N2 C10 DOUB Y N 18 A1D3L C12 N4 SING Y N 19 A1D3L C10 N3 SING Y N 20 A1D3L C11 N4 SING Y N 21 A1D3L C11 N3 DOUB Y N 22 A1D3L C13 H18 SING N N 23 A1D3L C12 H17 SING N N 24 A1D3L C10 H15 SING N N 25 A1D3L C2 H2 SING N N 26 A1D3L C2 H3 SING N N 27 A1D3L C3 H4 SING N N 28 A1D3L C4 H6 SING N N 29 A1D3L C4 H5 SING N N 30 A1D3L C5 H8 SING N N 31 A1D3L C5 H7 SING N N 32 A1D3L C6 H10 SING N N 33 A1D3L C6 H9 SING N N 34 A1D3L C7 H12 SING N N 35 A1D3L C7 H11 SING N N 36 A1D3L C8 H13 SING N N 37 A1D3L N1 H1 SING N N 38 A1D3L N4 H16 SING N N 39 A1D3L O2 H14 SING N N 40 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1D3L SMILES ACDLabs 14.52 "OC1CCCCC1CNC(=O)c1ncnc2[NH]ccc12" A1D3L InChI InChI 1.06 "InChI=1S/C14H18N4O2/c19-11-4-2-1-3-9(11)7-16-14(20)12-10-5-6-15-13(10)18-8-17-12/h5-6,8-9,11,19H,1-4,7H2,(H,16,20)(H,15,17,18)/t9-,11+/m0/s1" A1D3L InChIKey InChI 1.06 KWFZYIBEISVZOL-GXSJLCMTSA-N A1D3L SMILES_CANONICAL CACTVS 3.385 "O[C@@H]1CCCC[C@H]1CNC(=O)c2ncnc3[nH]ccc23" A1D3L SMILES CACTVS 3.385 "O[CH]1CCCC[CH]1CNC(=O)c2ncnc3[nH]ccc23" A1D3L SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1c[nH]c2c1c(ncn2)C(=O)NC[C@@H]3CCCC[C@H]3O" A1D3L SMILES "OpenEye OEToolkits" 3.1.0.0 "c1c[nH]c2c1c(ncn2)C(=O)NCC3CCCCC3O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1D3L "SYSTEMATIC NAME" ACDLabs 14.52 "N-{[(1S,2R)-2-hydroxycyclohexyl]methyl}-7H-pyrrolo[2,3-d]pyrimidine-4-carboxamide" A1D3L "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "~{N}-[[(1~{S},2~{R})-2-oxidanylcyclohexyl]methyl]-7~{H}-pyrrolo[2,3-d]pyrimidine-4-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1D3L "Create component" 2026-09-01 RCSB A1D3L "Initial release" 2026-11-04 RCSB #