data_A1D4B # _chem_comp.id A1D4B _chem_comp.name "2-[(2S)-1-(6-amino-5-chloropyrimidin-4-yl)pyrrolidin-2-yl]propan-2-ol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C11 H17 Cl N4 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2026-09-01 _chem_comp.pdbx_modified_date 2026-10-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 256.732 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1D4B _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 15OS _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? _chem_comp.pdbx_comp_type ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1D4B C11 C1 C 0 1 Y N N N N N -46.435 -29.498 5.290 -1.813 -0.207 -0.191 C11 A1D4B 1 A1D4B C1 C2 C 0 1 N N N N N N -44.388 -29.628 1.025 2.069 1.136 -1.890 C1 A1D4B 2 A1D4B C10 C3 C 0 1 Y N N N N N -46.458 -29.069 6.622 -2.934 0.609 -0.062 C10 A1D4B 3 A1D4B C2 C4 C 0 1 N N N N N N -43.367 -30.077 2.090 2.748 0.420 -0.721 C2 A1D4B 4 A1D4B C3 C5 C 0 1 N N N N N N -42.049 -30.493 1.409 3.981 1.214 -0.283 C3 A1D4B 5 A1D4B C4 C6 C 0 1 N N S N N N -43.972 -31.186 2.970 1.768 0.313 0.450 C4 A1D4B 6 A1D4B C5 C7 C 0 1 N N N N N N -44.295 -32.488 2.227 2.425 -0.457 1.615 C5 A1D4B 7 A1D4B C6 C8 C 0 1 N N N N N N -45.659 -32.897 2.757 1.255 -1.311 2.172 C6 A1D4B 8 A1D4B C7 C9 C 0 1 N N N N N N -46.316 -31.570 3.129 0.481 -1.664 0.877 C7 A1D4B 9 A1D4B C8 C10 C 0 1 Y N N N N N -45.278 -30.163 4.842 -0.571 0.321 0.149 C8 A1D4B 10 A1D4B C9 C11 C 0 1 Y N N N N N -44.340 -29.856 6.913 -1.585 2.319 0.688 C9 A1D4B 11 A1D4B N1 N1 N 0 1 N N N N N N -45.213 -30.679 3.536 0.576 -0.450 0.038 N1 A1D4B 12 A1D4B N2 N2 N 0 1 Y N N N N N -44.212 -30.318 5.671 -0.500 1.579 0.581 N2 A1D4B 13 A1D4B N3 N3 N 0 1 Y N N N N N -45.400 -29.239 7.437 -2.778 1.856 0.378 N3 A1D4B 14 A1D4B N4 N4 N 0 1 N N N N N N -47.562 -28.423 7.150 -4.194 0.129 -0.387 N4 A1D4B 15 A1D4B O1 O1 O 0 1 N N N N N N -43.131 -28.958 2.929 3.145 -0.890 -1.130 O1 A1D4B 16 A1D4B CL1 CL1 CL 0 0 N N N N N N -47.766 -29.144 4.247 -1.962 -1.843 -0.752 CL1 A1D4B 17 A1D4B H3 H1 H 0 1 N N N N N N -45.326 -29.332 1.517 1.191 0.571 -2.202 H3 A1D4B 18 A1D4B H1 H2 H 0 1 N N N N N N -43.982 -28.772 0.466 1.766 2.135 -1.578 H1 A1D4B 19 A1D4B H2 H3 H 0 1 N N N N N N -44.584 -30.459 0.332 2.767 1.212 -2.724 H2 A1D4B 20 A1D4B H4 H4 H 0 1 N N N N N N -41.325 -30.812 2.174 3.677 2.213 0.029 H4 A1D4B 21 A1D4B H6 H5 H 0 1 N N N N N N -42.241 -31.326 0.716 4.464 0.704 0.550 H6 A1D4B 22 A1D4B H5 H6 H 0 1 N N N N N N -41.639 -29.638 0.851 4.679 1.290 -1.117 H5 A1D4B 23 A1D4B H8 H7 H 0 1 N N N N N N -43.263 -31.413 3.780 1.475 1.310 0.780 H8 A1D4B 24 A1D4B H10 H8 H 0 1 N N N N N N -43.543 -33.260 2.449 3.229 -1.096 1.250 H10 A1D4B 25 A1D4B H9 H9 H 0 1 N N N N N N -44.335 -32.317 1.141 2.793 0.233 2.374 H9 A1D4B 26 A1D4B H12 H10 H 0 1 N N N N N N -46.240 -33.419 1.983 1.628 -2.211 2.661 H12 A1D4B 27 A1D4B H11 H11 H 0 1 N N N N N N -45.558 -33.546 3.640 0.634 -0.727 2.851 H11 A1D4B 28 A1D4B H14 H12 H 0 1 N N N N N N -46.849 -31.150 2.263 0.949 -2.510 0.374 H14 A1D4B 29 A1D4B H13 H13 H 0 1 N N N N N N -47.022 -31.711 3.961 -0.561 -1.886 1.107 H13 A1D4B 30 A1D4B H15 H14 H 0 1 N N N N N N -43.493 -29.996 7.568 -1.493 3.335 1.043 H15 A1D4B 31 A1D4B H16 H15 H 0 1 N N N N N N -47.381 -28.176 8.102 -4.300 -0.780 -0.707 H16 A1D4B 32 A1D4B H17 H16 H 0 1 N N N N N N -47.748 -27.595 6.621 -4.970 0.704 -0.295 H17 A1D4B 33 A1D4B H7 H17 H 0 1 N N N N N N -42.504 -29.193 3.603 3.768 -0.899 -1.870 H7 A1D4B 34 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1D4B C1 C2 SING N N 1 A1D4B C3 C2 SING N N 2 A1D4B C2 O1 SING N N 3 A1D4B C2 C4 SING N N 4 A1D4B C5 C6 SING N N 5 A1D4B C5 C4 SING N N 6 A1D4B C6 C7 SING N N 7 A1D4B C4 N1 SING N N 8 A1D4B C7 N1 SING N N 9 A1D4B N1 C8 SING N N 10 A1D4B CL1 C11 SING N N 11 A1D4B C8 C11 DOUB Y N 12 A1D4B C8 N2 SING Y N 13 A1D4B C11 C10 SING Y N 14 A1D4B N2 C9 DOUB Y N 15 A1D4B C10 N4 SING N N 16 A1D4B C10 N3 DOUB Y N 17 A1D4B C9 N3 SING Y N 18 A1D4B C1 H3 SING N N 19 A1D4B C1 H1 SING N N 20 A1D4B C1 H2 SING N N 21 A1D4B C3 H4 SING N N 22 A1D4B C3 H6 SING N N 23 A1D4B C3 H5 SING N N 24 A1D4B C4 H8 SING N N 25 A1D4B C5 H10 SING N N 26 A1D4B C5 H9 SING N N 27 A1D4B C6 H12 SING N N 28 A1D4B C6 H11 SING N N 29 A1D4B C7 H14 SING N N 30 A1D4B C7 H13 SING N N 31 A1D4B C9 H15 SING N N 32 A1D4B N4 H16 SING N N 33 A1D4B N4 H17 SING N N 34 A1D4B O1 H7 SING N N 35 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1D4B SMILES ACDLabs 14.52 "CC(C)(O)C1CCCN1c1ncnc(N)c1Cl" A1D4B InChI InChI 1.06 "InChI=1S/C11H17ClN4O/c1-11(2,17)7-4-3-5-16(7)10-8(12)9(13)14-6-15-10/h6-7,17H,3-5H2,1-2H3,(H2,13,14,15)/t7-/m0/s1" A1D4B InChIKey InChI 1.06 LBQAFYJOQZVBED-ZETCQYMHSA-N A1D4B SMILES_CANONICAL CACTVS 3.385 "CC(C)(O)[C@@H]1CCCN1c2ncnc(N)c2Cl" A1D4B SMILES CACTVS 3.385 "CC(C)(O)[CH]1CCCN1c2ncnc(N)c2Cl" A1D4B SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "CC(C)([C@@H]1CCCN1c2c(c(ncn2)N)Cl)O" A1D4B SMILES "OpenEye OEToolkits" 3.1.0.0 "CC(C)(C1CCCN1c2c(c(ncn2)N)Cl)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1D4B "SYSTEMATIC NAME" ACDLabs 14.52 "2-[(2S)-1-(6-amino-5-chloropyrimidin-4-yl)pyrrolidin-2-yl]propan-2-ol" A1D4B "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "2-[(2~{S})-1-(6-azanyl-5-chloranyl-pyrimidin-4-yl)pyrrolidin-2-yl]propan-2-ol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1D4B "Create component" 2026-09-01 RCSB A1D4B "Initial release" 2026-11-04 RCSB #