data_A1D4C # _chem_comp.id A1D4C _chem_comp.name "4-{(3S)-3-[(pyridin-2-yl)oxy]pyrrolidin-1-yl}-7H-pyrrolo[2,3-d]pyrimidine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C15 H15 N5 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2026-09-01 _chem_comp.pdbx_modified_date 2026-10-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 281.313 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1D4C _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 15OT _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? _chem_comp.pdbx_comp_type ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1D4C C13 C1 C 0 1 Y N N N N N -47.036 -29.103 5.243 -3.298 0.394 0.134 C13 A1D4C 1 A1D4C C15 C2 C 0 1 Y N N N N N -45.582 -33.287 -1.988 5.242 1.234 0.735 C15 A1D4C 2 A1D4C C11 C3 C 0 1 Y N N N N N -49.033 -28.804 6.266 -4.964 1.901 -0.034 C11 A1D4C 3 A1D4C C12 C4 C 0 1 Y N N N N N -48.453 -28.920 5.030 -3.632 1.817 0.112 C12 A1D4C 4 A1D4C C1 C5 C 0 1 Y N N N N N -46.254 -34.517 -1.870 6.336 0.500 0.321 C1 A1D4C 5 A1D4C C10 C6 C 0 1 Y N N N N N -46.822 -29.082 6.651 -4.515 -0.297 -0.006 C10 A1D4C 6 A1D4C C14 C7 C 0 1 N N N N N N -44.755 -30.017 2.361 0.210 -0.702 0.521 C14 A1D4C 7 A1D4C C2 C8 C 0 1 Y N N N N N -46.755 -34.896 -0.609 6.135 -0.702 -0.343 C2 A1D4C 8 A1D4C C3 C9 C 0 1 Y N N N N N -46.559 -34.028 0.482 4.837 -1.123 -0.569 C3 A1D4C 9 A1D4C C4 C10 C 0 1 Y N N N N N -45.872 -32.816 0.267 3.783 -0.334 -0.124 C4 A1D4C 10 A1D4C C5 C11 C 0 1 N N S N N N -45.375 -30.607 1.100 1.467 0.121 0.141 C5 A1D4C 11 A1D4C C6 C12 C 0 1 N N N N N N -46.651 -29.796 0.867 0.949 1.041 -0.988 C6 A1D4C 12 A1D4C C7 C13 C 0 1 N N N N N N -47.051 -29.331 2.264 -0.577 1.102 -0.790 C7 A1D4C 13 A1D4C C8 C14 C 0 1 Y N N N N N -45.857 -29.286 4.460 -2.113 -0.347 0.262 C8 A1D4C 14 A1D4C C9 C15 C 0 1 Y N N N N N -44.621 -29.373 6.435 -3.359 -2.283 0.111 C9 A1D4C 15 A1D4C N1 N1 N 0 1 N N N N N N -45.831 -29.330 3.053 -0.892 0.286 0.403 N1 A1D4C 16 A1D4C N2 N2 N 0 1 Y N N N N N -44.668 -29.413 5.101 -2.195 -1.674 0.245 N2 A1D4C 17 A1D4C N3 N3 N 0 1 Y N N N N N -45.630 -29.218 7.293 -4.493 -1.629 -0.017 N3 A1D4C 18 A1D4C N4 N4 N 0 1 Y N N N N N -48.054 -28.899 7.236 -5.504 0.643 -0.106 N4 A1D4C 19 A1D4C N5 N5 N 0 1 Y N N N N N -45.394 -32.449 -0.946 4.015 0.806 0.506 N5 A1D4C 20 A1D4C O1 O1 O 0 1 N N N N N N -45.678 -31.975 1.339 2.506 -0.735 -0.339 O1 A1D4C 21 A1D4C H15 H1 H 0 1 N N N N N N -45.199 -33.000 -2.956 5.392 2.168 1.256 H15 A1D4C 22 A1D4C H11 H2 H 0 1 N N N N N N -50.087 -28.661 6.452 -5.526 2.822 -0.086 H11 A1D4C 23 A1D4C H12 H3 H 0 1 N N N N N N -48.959 -28.882 4.077 -2.940 2.642 0.196 H12 A1D4C 24 A1D4C H1 H4 H 0 1 N N N N N N -46.383 -35.158 -2.729 7.337 0.858 0.513 H1 A1D4C 25 A1D4C H14 H5 H 0 1 N N N N N N -44.343 -30.816 2.994 0.064 -1.526 -0.177 H14 A1D4C 26 A1D4C H13 H6 H 0 1 N N N N N N -43.956 -29.308 2.098 0.285 -1.075 1.543 H13 A1D4C 27 A1D4C H2 H7 H 0 1 N N N N N N -47.278 -35.832 -0.482 6.974 -1.295 -0.678 H2 A1D4C 28 A1D4C H3 H8 H 0 1 N N N N N N -46.928 -34.286 1.464 4.644 -2.053 -1.083 H3 A1D4C 29 A1D4C H4 H9 H 0 1 N N N N N N -44.690 -30.485 0.248 1.815 0.707 0.991 H4 A1D4C 30 A1D4C H6 H10 H 0 1 N N N N N N -46.454 -28.936 0.210 1.383 2.036 -0.894 H6 A1D4C 31 A1D4C H5 H11 H 0 1 N N N N N N -47.438 -30.424 0.423 1.187 0.614 -1.962 H5 A1D4C 32 A1D4C H8 H12 H 0 1 N N N N N N -47.479 -28.319 2.221 -0.889 2.133 -0.628 H8 A1D4C 33 A1D4C H7 H13 H 0 1 N N N N N N -47.787 -30.022 2.700 -1.081 0.691 -1.664 H7 A1D4C 34 A1D4C H9 H14 H 0 1 N N N N N N -43.641 -29.480 6.875 -3.380 -3.363 0.098 H9 A1D4C 35 A1D4C H10 H15 H 0 1 N N N N N N -48.217 -28.843 8.221 -6.448 0.448 -0.211 H10 A1D4C 36 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1D4C C15 C1 DOUB Y N 1 A1D4C C15 N5 SING Y N 2 A1D4C C1 C2 SING Y N 3 A1D4C N5 C4 DOUB Y N 4 A1D4C C2 C3 DOUB Y N 5 A1D4C C4 C3 SING Y N 6 A1D4C C4 O1 SING N N 7 A1D4C C6 C5 SING N N 8 A1D4C C6 C7 SING N N 9 A1D4C C5 O1 SING N N 10 A1D4C C5 C14 SING N N 11 A1D4C C7 N1 SING N N 12 A1D4C C14 N1 SING N N 13 A1D4C N1 C8 SING N N 14 A1D4C C8 N2 DOUB Y N 15 A1D4C C8 C13 SING Y N 16 A1D4C C12 C13 SING Y N 17 A1D4C C12 C11 DOUB Y N 18 A1D4C N2 C9 SING Y N 19 A1D4C C13 C10 DOUB Y N 20 A1D4C C11 N4 SING Y N 21 A1D4C C9 N3 DOUB Y N 22 A1D4C C10 N4 SING Y N 23 A1D4C C10 N3 SING Y N 24 A1D4C C15 H15 SING N N 25 A1D4C C11 H11 SING N N 26 A1D4C C12 H12 SING N N 27 A1D4C C1 H1 SING N N 28 A1D4C C14 H14 SING N N 29 A1D4C C14 H13 SING N N 30 A1D4C C2 H2 SING N N 31 A1D4C C3 H3 SING N N 32 A1D4C C5 H4 SING N N 33 A1D4C C6 H6 SING N N 34 A1D4C C6 H5 SING N N 35 A1D4C C7 H8 SING N N 36 A1D4C C7 H7 SING N N 37 A1D4C C9 H9 SING N N 38 A1D4C N4 H10 SING N N 39 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1D4C SMILES ACDLabs 14.52 "n1cnc(c2cc[NH]c12)N1CCC(C1)Oc1ccccn1" A1D4C InChI InChI 1.06 "InChI=1S/C15H15N5O/c1-2-6-16-13(3-1)21-11-5-8-20(9-11)15-12-4-7-17-14(12)18-10-19-15/h1-4,6-7,10-11H,5,8-9H2,(H,17,18,19)/t11-/m0/s1" A1D4C InChIKey InChI 1.06 LTGACXWMGFAXTA-NSHDSACASA-N A1D4C SMILES_CANONICAL CACTVS 3.385 "C1CN(C[C@H]1Oc2ccccn2)c3ncnc4[nH]ccc34" A1D4C SMILES CACTVS 3.385 "C1CN(C[CH]1Oc2ccccn2)c3ncnc4[nH]ccc34" A1D4C SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1ccnc(c1)O[C@H]2CCN(C2)c3c4cc[nH]c4ncn3" A1D4C SMILES "OpenEye OEToolkits" 3.1.0.0 "c1ccnc(c1)OC2CCN(C2)c3c4cc[nH]c4ncn3" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1D4C "SYSTEMATIC NAME" ACDLabs 14.52 "4-{(3S)-3-[(pyridin-2-yl)oxy]pyrrolidin-1-yl}-7H-pyrrolo[2,3-d]pyrimidine" A1D4C "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "4-[(3~{S})-3-pyridin-2-yloxypyrrolidin-1-yl]-7~{H}-pyrrolo[2,3-d]pyrimidine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1D4C "Create component" 2026-09-01 RCSB A1D4C "Initial release" 2026-11-04 RCSB #