data_A1D4M # _chem_comp.id A1D4M _chem_comp.name "(5S)-1-[(6-chloro-7H-pyrrolo[2,3-d]pyrimidin-4-yl)amino]-5-methylpyrrolidin-2-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C11 H12 Cl N5 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2026-09-03 _chem_comp.pdbx_modified_date 2026-10-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 265.699 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1D4M _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 15BR _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? _chem_comp.pdbx_comp_type ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1D4M C11 C1 C 0 1 Y N N N N N -46.191 -29.709 4.600 1.251 -0.199 0.074 C11 A1D4M 1 A1D4M C1 C2 C 0 1 N N N N N N -42.941 -28.619 1.209 -2.906 2.350 1.353 C1 A1D4M 2 A1D4M C10 C3 C 0 1 Y N N N N N -47.547 -29.676 4.152 2.129 0.928 -0.232 C10 A1D4M 3 A1D4M C2 C4 C 0 1 N N S N N N -43.100 -30.119 0.963 -3.260 0.908 0.985 C2 A1D4M 4 A1D4M C3 C5 C 0 1 N N N N N N -41.789 -30.903 0.803 -4.698 0.837 0.423 C3 A1D4M 5 A1D4M C4 C6 C 0 1 N N N N N N -42.033 -32.271 1.457 -4.560 -0.262 -0.655 C4 A1D4M 6 A1D4M C5 C7 C 0 1 N N N N N N -43.230 -32.007 2.349 -3.095 -0.233 -1.031 C5 A1D4M 7 A1D4M C6 C8 C 0 1 Y N N N N N -44.947 -29.972 4.012 -0.137 -0.393 0.124 C6 A1D4M 8 A1D4M C7 C9 C 0 1 Y N N N N N -43.942 -29.643 6.059 0.233 -2.593 0.712 C7 A1D4M 9 A1D4M C8 C10 C 0 1 Y N N N N N -46.165 -29.442 5.987 2.096 -1.287 0.365 C8 A1D4M 10 A1D4M C9 C11 C 0 1 Y N N N N N -48.263 -29.387 5.273 3.392 0.481 -0.115 C9 A1D4M 11 A1D4M N1 N1 N 0 1 N N N N N N -43.743 -30.805 2.061 -2.392 0.432 -0.098 N1 A1D4M 12 A1D4M N2 N2 N 0 1 N N N N N N -44.880 -30.275 2.662 -1.009 0.645 -0.154 N2 A1D4M 13 A1D4M N3 N3 N 0 1 Y N N N N N -43.822 -29.933 4.767 -0.595 -1.599 0.446 N3 A1D4M 14 A1D4M N4 N4 N 0 1 Y N N N N N -45.055 -29.396 6.752 1.541 -2.456 0.681 N4 A1D4M 15 A1D4M N5 N5 N 0 1 Y N N N N N -47.455 -29.233 6.384 3.384 -0.842 0.242 N5 A1D4M 16 A1D4M O1 O1 O 0 1 N N N N N N -43.640 -32.793 3.202 -2.623 -0.738 -2.028 O1 A1D4M 17 A1D4M CL1 CL1 CL 0 0 N N N N N N -49.940 -29.222 5.462 4.818 1.436 -0.377 CL1 A1D4M 18 A1D4M H1 H1 H 0 1 N N N N N N -43.934 -28.156 1.308 -3.016 2.987 0.475 H1 A1D4M 19 A1D4M H2 H2 H 0 1 N N N N N N -42.367 -28.458 2.134 -3.575 2.699 2.140 H2 A1D4M 20 A1D4M H3 H3 H 0 1 N N N N N N -42.407 -28.163 0.362 -1.876 2.392 1.706 H3 A1D4M 21 A1D4M H12 H4 H 0 1 N N N N N N -47.919 -29.842 3.152 1.823 1.929 -0.501 H12 A1D4M 22 A1D4M H4 H5 H 0 1 N N N N N N -43.696 -30.257 0.049 -3.163 0.262 1.858 H4 A1D4M 23 A1D4M H6 H6 H 0 1 N N N N N N -41.545 -31.027 -0.262 -5.405 0.539 1.197 H6 A1D4M 24 A1D4M H5 H7 H 0 1 N N N N N N -40.965 -30.378 1.309 -4.989 1.788 -0.024 H5 A1D4M 25 A1D4M H7 H8 H 0 1 N N N N N N -42.263 -33.036 0.701 -4.830 -1.235 -0.245 H7 A1D4M 26 A1D4M H8 H9 H 0 1 N N N N N N -41.161 -32.589 2.047 -5.181 -0.028 -1.521 H8 A1D4M 27 A1D4M H10 H10 H 0 1 N N N N N N -43.020 -29.602 6.620 -0.180 -3.556 0.973 H10 A1D4M 28 A1D4M H9 H11 H 0 1 N N N N N N -45.076 -29.422 2.178 -0.661 1.520 -0.387 H9 A1D4M 29 A1D4M H11 H12 H 0 1 N N N N N N -47.760 -29.009 7.310 4.176 -1.385 0.386 H11 A1D4M 30 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1D4M C3 C2 SING N N 1 A1D4M C3 C4 SING N N 2 A1D4M C2 C1 SING N N 3 A1D4M C2 N1 SING N N 4 A1D4M C4 C5 SING N N 5 A1D4M N1 C5 SING N N 6 A1D4M N1 N2 SING N N 7 A1D4M C5 O1 DOUB N N 8 A1D4M N2 C6 SING N N 9 A1D4M C6 C11 DOUB Y N 10 A1D4M C6 N3 SING Y N 11 A1D4M C10 C11 SING Y N 12 A1D4M C10 C9 DOUB Y N 13 A1D4M C11 C8 SING Y N 14 A1D4M N3 C7 DOUB Y N 15 A1D4M C9 CL1 SING N N 16 A1D4M C9 N5 SING Y N 17 A1D4M C8 N5 SING Y N 18 A1D4M C8 N4 DOUB Y N 19 A1D4M C7 N4 SING Y N 20 A1D4M C1 H1 SING N N 21 A1D4M C1 H2 SING N N 22 A1D4M C1 H3 SING N N 23 A1D4M C10 H12 SING N N 24 A1D4M C2 H4 SING N N 25 A1D4M C3 H6 SING N N 26 A1D4M C3 H5 SING N N 27 A1D4M C4 H7 SING N N 28 A1D4M C4 H8 SING N N 29 A1D4M C7 H10 SING N N 30 A1D4M N2 H9 SING N N 31 A1D4M N5 H11 SING N N 32 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1D4M SMILES ACDLabs 14.52 "Clc1cc2c(ncnc2[NH]1)NN1C(=O)CCC1C" A1D4M InChI InChI 1.06 "InChI=1S/C11H12ClN5O/c1-6-2-3-9(18)17(6)16-11-7-4-8(12)15-10(7)13-5-14-11/h4-6H,2-3H2,1H3,(H2,13,14,15,16)/t6-/m0/s1" A1D4M InChIKey InChI 1.06 IAAFRCRGYNACKT-LURJTMIESA-N A1D4M SMILES_CANONICAL CACTVS 3.385 "C[C@H]1CCC(=O)N1Nc2ncnc3[nH]c(Cl)cc23" A1D4M SMILES CACTVS 3.385 "C[CH]1CCC(=O)N1Nc2ncnc3[nH]c(Cl)cc23" A1D4M SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "C[C@H]1CCC(=O)N1Nc2c3cc([nH]c3ncn2)Cl" A1D4M SMILES "OpenEye OEToolkits" 3.1.0.0 "CC1CCC(=O)N1Nc2c3cc([nH]c3ncn2)Cl" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1D4M "SYSTEMATIC NAME" ACDLabs 14.52 "(5S)-1-[(6-chloro-7H-pyrrolo[2,3-d]pyrimidin-4-yl)amino]-5-methylpyrrolidin-2-one" A1D4M "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "(5~{S})-1-[(6-chloranyl-7~{H}-pyrrolo[2,3-d]pyrimidin-4-yl)amino]-5-methyl-pyrrolidin-2-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1D4M "Create component" 2026-09-03 RCSB A1D4M "Initial release" 2026-11-04 RCSB #