data_A1D4N # _chem_comp.id A1D4N _chem_comp.name "(5S)-1-[(6-methyl-7H-pyrrolo[2,3-d]pyrimidin-4-yl)amino]-5-phenylpyrrolidin-2-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C17 H17 N5 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2026-09-03 _chem_comp.pdbx_modified_date 2026-10-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 307.350 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1D4N _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 15BS _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? _chem_comp.pdbx_comp_type ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1D4N C13 C1 C 0 1 Y N N N N N -46.538 -26.637 -0.574 2.797 -3.546 0.062 C13 A1D4N 1 A1D4N C17 C2 C 0 1 Y N N N N N -46.573 -29.464 6.717 -3.260 0.157 -0.882 C17 A1D4N 2 A1D4N C16 C3 C 0 1 Y N N N N N -44.381 -29.331 6.404 -1.792 1.227 -2.295 C16 A1D4N 3 A1D4N C15 C4 C 0 1 Y N N N N N -46.076 -28.873 0.270 2.578 -1.673 -1.413 C15 A1D4N 4 A1D4N C11 C5 C 0 1 Y N N N N N -44.499 -27.058 0.687 2.516 -1.343 0.957 C11 A1D4N 5 A1D4N C12 C6 C 0 1 Y N N N N N -45.332 -26.167 -0.013 2.682 -2.702 1.151 C12 A1D4N 6 A1D4N C1 C7 C 0 1 N N N N N N -50.220 -29.780 6.840 -5.078 -1.582 1.826 C1 A1D4N 7 A1D4N C10 C8 C 0 1 Y N N N N N -44.864 -28.416 0.827 2.464 -0.829 -0.325 C10 A1D4N 8 A1D4N C14 C9 C 0 1 Y N N N N N -46.913 -27.992 -0.434 2.745 -3.032 -1.220 C14 A1D4N 9 A1D4N C2 C10 C 0 1 Y N N N N N -48.794 -29.735 6.423 -4.096 -0.880 0.923 C2 A1D4N 10 A1D4N C3 C11 C 0 1 Y N N N N N -48.246 -29.890 5.181 -2.820 -0.604 1.237 C3 A1D4N 11 A1D4N C4 C12 C 0 1 Y N N N N N -46.827 -29.731 5.351 -2.237 0.074 0.081 C4 A1D4N 12 A1D4N C5 C13 C 0 1 Y N N N N N -45.673 -29.770 4.539 -0.976 0.607 -0.228 C5 A1D4N 13 A1D4N C6 C14 C 0 1 N N N N N N -43.989 -31.517 2.535 1.682 2.338 0.944 C6 A1D4N 14 A1D4N C7 C15 C 0 1 N N N N N N -42.773 -31.496 1.628 3.051 2.713 0.422 C7 A1D4N 15 A1D4N C8 C16 C 0 1 N N N N N N -43.022 -30.253 0.754 3.590 1.404 -0.200 C8 A1D4N 16 A1D4N C9 C17 C 0 1 N N S N N N -43.942 -29.353 1.601 2.283 0.652 -0.535 C9 A1D4N 17 A1D4N N1 N1 N 0 1 N N N N N N -45.746 -30.020 3.177 0.061 0.549 0.685 N1 A1D4N 18 A1D4N N2 N2 N 0 1 N N N N N N -44.604 -30.338 2.453 1.281 1.176 0.400 N2 A1D4N 19 A1D4N N3 N3 N 0 1 Y N N N N N -44.454 -29.566 5.095 -0.804 1.169 -1.420 N3 A1D4N 20 A1D4N N4 N4 N 0 1 Y N N N N N -45.366 -29.254 7.292 -2.989 0.740 -2.049 N4 A1D4N 21 A1D4N N5 N5 N 0 1 Y N N N N N -47.795 -29.463 7.337 -4.371 -0.431 -0.343 N5 A1D4N 22 A1D4N O1 O1 O 0 1 N N N N N N -44.333 -32.487 3.212 1.041 2.990 1.742 O1 A1D4N 23 A1D4N H13 H1 H 0 1 N N N N N N -47.179 -25.956 -1.114 2.931 -4.607 0.214 H13 A1D4N 24 A1D4N H16 H2 H 0 1 N N N N N N -43.386 -29.183 6.797 -1.610 1.692 -3.253 H16 A1D4N 25 A1D4N H15 H3 H 0 1 N N N N N N -46.363 -29.908 0.386 2.538 -1.271 -2.415 H15 A1D4N 26 A1D4N H11 H4 H 0 1 N N N N N N -43.576 -26.703 1.120 2.426 -0.683 1.808 H11 A1D4N 27 A1D4N H12 H5 H 0 1 N N N N N N -45.050 -25.130 -0.120 2.722 -3.104 2.153 H12 A1D4N 28 A1D4N H1 H6 H 0 1 N N N N N N -50.486 -30.808 7.128 -5.022 -2.657 1.658 H1 A1D4N 29 A1D4N H3 H7 H 0 1 N N N N N N -50.373 -29.108 7.697 -4.837 -1.363 2.866 H3 A1D4N 30 A1D4N H2 H8 H 0 1 N N N N N N -50.857 -29.458 6.003 -6.087 -1.233 1.606 H2 A1D4N 31 A1D4N H14 H9 H 0 1 N N N N N N -47.837 -28.348 -0.865 2.835 -3.691 -2.070 H14 A1D4N 32 A1D4N H4 H10 H 0 1 N N N N N N -48.772 -30.091 4.259 -2.320 -0.840 2.165 H4 A1D4N 33 A1D4N H6 H11 H 0 1 N N N N N N -42.720 -32.408 1.015 2.970 3.491 -0.337 H6 A1D4N 34 A1D4N H7 H12 H 0 1 N N N N N N -41.846 -31.392 2.211 3.694 3.042 1.238 H7 A1D4N 35 A1D4N H8 H13 H 0 1 N N N N N N -43.516 -30.534 -0.188 4.163 1.612 -1.104 H8 A1D4N 36 A1D4N H9 H14 H 0 1 N N N N N N -42.075 -29.739 0.532 4.189 0.844 0.519 H9 A1D4N 37 A1D4N H10 H15 H 0 1 N N N N N N -43.295 -28.729 2.235 1.986 0.853 -1.565 H10 A1D4N 38 A1D4N H5 H16 H 0 1 N N N N N N -46.132 -29.199 2.756 -0.056 0.074 1.523 H5 A1D4N 39 A1D4N H17 H17 H 0 1 N N N N N N -47.942 -29.290 8.311 -5.227 -0.518 -0.790 H17 A1D4N 40 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1D4N C13 C14 DOUB Y N 1 A1D4N C13 C12 SING Y N 2 A1D4N C14 C15 SING Y N 3 A1D4N C12 C11 DOUB Y N 4 A1D4N C15 C10 DOUB Y N 5 A1D4N C11 C10 SING Y N 6 A1D4N C8 C9 SING N N 7 A1D4N C8 C7 SING N N 8 A1D4N C10 C9 SING N N 9 A1D4N C9 N2 SING N N 10 A1D4N C7 C6 SING N N 11 A1D4N N2 C6 SING N N 12 A1D4N N2 N1 SING N N 13 A1D4N C6 O1 DOUB N N 14 A1D4N N1 C5 SING N N 15 A1D4N C5 N3 DOUB Y N 16 A1D4N C5 C4 SING Y N 17 A1D4N N3 C16 SING Y N 18 A1D4N C3 C4 SING Y N 19 A1D4N C3 C2 DOUB Y N 20 A1D4N C4 C17 DOUB Y N 21 A1D4N C16 N4 DOUB Y N 22 A1D4N C2 C1 SING N N 23 A1D4N C2 N5 SING Y N 24 A1D4N C17 N4 SING Y N 25 A1D4N C17 N5 SING Y N 26 A1D4N C13 H13 SING N N 27 A1D4N C16 H16 SING N N 28 A1D4N C15 H15 SING N N 29 A1D4N C11 H11 SING N N 30 A1D4N C12 H12 SING N N 31 A1D4N C1 H1 SING N N 32 A1D4N C1 H3 SING N N 33 A1D4N C1 H2 SING N N 34 A1D4N C14 H14 SING N N 35 A1D4N C3 H4 SING N N 36 A1D4N C7 H6 SING N N 37 A1D4N C7 H7 SING N N 38 A1D4N C8 H8 SING N N 39 A1D4N C8 H9 SING N N 40 A1D4N C9 H10 SING N N 41 A1D4N N1 H5 SING N N 42 A1D4N N5 H17 SING N N 43 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1D4N SMILES ACDLabs 14.52 "Cc1cc2c(ncnc2[NH]1)NN1C(=O)CCC1c1ccccc1" A1D4N InChI InChI 1.06 "InChI=1S/C17H17N5O/c1-11-9-13-16(20-11)18-10-19-17(13)21-22-14(7-8-15(22)23)12-5-3-2-4-6-12/h2-6,9-10,14H,7-8H2,1H3,(H2,18,19,20,21)/t14-/m0/s1" A1D4N InChIKey InChI 1.06 PCAWPWVWZVYRNP-AWEZNQCLSA-N A1D4N SMILES_CANONICAL CACTVS 3.385 "Cc1[nH]c2ncnc(NN3[C@@H](CCC3=O)c4ccccc4)c2c1" A1D4N SMILES CACTVS 3.385 "Cc1[nH]c2ncnc(NN3[CH](CCC3=O)c4ccccc4)c2c1" A1D4N SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "Cc1cc2c([nH]1)ncnc2NN3[C@@H](CCC3=O)c4ccccc4" A1D4N SMILES "OpenEye OEToolkits" 3.1.0.0 "Cc1cc2c([nH]1)ncnc2NN3C(CCC3=O)c4ccccc4" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1D4N "SYSTEMATIC NAME" ACDLabs 14.52 "(5S)-1-[(6-methyl-7H-pyrrolo[2,3-d]pyrimidin-4-yl)amino]-5-phenylpyrrolidin-2-one" A1D4N "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "(5~{S})-1-[(6-methyl-7~{H}-pyrrolo[2,3-d]pyrimidin-4-yl)amino]-5-phenyl-pyrrolidin-2-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1D4N "Create component" 2026-09-03 RCSB A1D4N "Initial release" 2026-11-04 RCSB #