data_A1D4P # _chem_comp.id A1D4P _chem_comp.name "1-[(8-amino-9H-pyrimido[4,5-b]indol-4-yl)amino]pyrrolidin-2-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C14 H14 N6 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2026-09-03 _chem_comp.pdbx_modified_date 2026-10-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 282.301 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1D4P _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 15CB _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? _chem_comp.pdbx_comp_type ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1D4P C13 C1 C 0 1 N N N N N N -43.688 -30.915 2.224 3.593 0.309 0.836 C13 A1D4P 1 A1D4P C11 C2 C 0 1 N N N N N N -42.488 -29.575 0.633 5.017 1.252 -0.870 C11 A1D4P 2 A1D4P C12 C3 C 0 1 N N N N N N -42.463 -30.945 1.328 5.046 0.406 0.424 C12 A1D4P 3 A1D4P C1 C4 C 0 1 Y N N N N N -50.107 -29.096 6.099 -4.153 0.607 0.062 C1 A1D4P 4 A1D4P C10 C5 C 0 1 N N N N N N -43.661 -28.782 1.230 3.583 0.992 -1.384 C10 A1D4P 5 A1D4P C14 C6 C 0 1 Y N N N N N -46.663 -29.312 4.959 -0.711 -0.524 -0.100 C14 A1D4P 6 A1D4P C2 C7 C 0 1 Y N N N N N -50.893 -28.993 4.940 -4.091 1.989 0.109 C2 A1D4P 7 A1D4P C3 C8 C 0 1 Y N N N N N -50.282 -28.987 3.673 -2.867 2.640 0.088 C3 A1D4P 8 A1D4P C4 C9 C 0 1 Y N N N N N -48.884 -29.097 3.552 -1.697 1.916 0.021 C4 A1D4P 9 A1D4P C5 C10 C 0 1 Y N N N N N -48.078 -29.203 4.702 -1.741 0.523 -0.026 C5 A1D4P 10 A1D4P C6 C11 C 0 1 Y N N N N N -48.713 -29.188 5.981 -2.975 -0.141 0.000 C6 A1D4P 11 A1D4P C7 C12 C 0 1 Y N N N N N -46.510 -29.366 6.366 -1.388 -1.754 -0.121 C7 A1D4P 12 A1D4P C8 C13 C 0 1 Y N N N N N -44.282 -29.526 6.218 0.647 -2.829 -0.230 C8 A1D4P 13 A1D4P C9 C14 C 0 1 Y N N N N N -45.460 -29.398 4.223 0.688 -0.524 -0.155 C9 A1D4P 14 A1D4P N1 N1 N 0 1 N N N N N N -50.693 -29.102 7.365 -5.393 -0.040 0.084 N1 A1D4P 15 A1D4P N2 N2 N 0 1 Y N N N N N -47.742 -29.290 6.976 -2.736 -1.507 -0.058 N2 A1D4P 16 A1D4P N3 N3 N 0 1 Y N N N N N -45.334 -29.475 7.033 -0.668 -2.874 -0.186 N3 A1D4P 17 A1D4P N4 N4 N 0 1 Y N N N N N -44.274 -29.497 4.885 1.320 -1.694 -0.226 N4 A1D4P 18 A1D4P N5 N5 N 0 1 N N N N N N -45.442 -29.363 2.829 1.398 0.663 -0.137 N5 A1D4P 19 A1D4P N6 N6 N 0 1 N N N N N N -44.291 -29.724 2.131 2.797 0.645 -0.194 N6 A1D4P 20 A1D4P O1 O1 O 0 1 N N N N N N -44.038 -31.878 2.915 3.204 -0.028 1.934 O1 A1D4P 21 A1D4P H11 H1 H 0 1 N N N N N N -42.633 -29.705 -0.450 5.166 2.309 -0.648 H11 A1D4P 22 A1D4P H12 H2 H 0 1 N N N N N N -41.542 -29.043 0.815 5.759 0.897 -1.585 H12 A1D4P 23 A1D4P H13 H3 H 0 1 N N N N N N -42.535 -31.760 0.592 5.629 0.908 1.196 H13 A1D4P 24 A1D4P H14 H4 H 0 1 N N N N N N -41.545 -31.067 1.922 5.452 -0.585 0.222 H14 A1D4P 25 A1D4P H9 H5 H 0 1 N N N N N N -43.299 -27.899 1.777 3.181 1.890 -1.852 H9 A1D4P 26 A1D4P H10 H6 H 0 1 N N N N N N -44.361 -28.465 0.443 3.580 0.163 -2.092 H10 A1D4P 27 A1D4P H3 H7 H 0 1 N N N N N N -51.967 -28.918 5.021 -5.003 2.565 0.161 H3 A1D4P 28 A1D4P H4 H8 H 0 1 N N N N N N -50.891 -28.897 2.785 -2.831 3.718 0.124 H4 A1D4P 29 A1D4P H5 H9 H 0 1 N N N N N N -48.428 -29.100 2.573 -0.745 2.427 0.005 H5 A1D4P 30 A1D4P H7 H10 H 0 1 N N N N N N -43.316 -29.600 6.696 1.196 -3.757 -0.282 H7 A1D4P 31 A1D4P H1 H11 H 0 1 N N N N N N -49.981 -29.182 8.062 -6.210 0.480 0.131 H1 A1D4P 32 A1D4P H2 H12 H 0 1 N N N N N N -51.199 -28.251 7.502 -5.435 -1.008 0.051 H2 A1D4P 33 A1D4P H6 H13 H 0 1 N N N N N N -47.911 -29.305 7.962 -3.425 -2.190 -0.054 H6 A1D4P 34 A1D4P H8 H14 H 0 1 N N N N N N -45.657 -28.423 2.562 0.926 1.509 -0.086 H8 A1D4P 35 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1D4P C11 C10 SING N N 1 A1D4P C11 C12 SING N N 2 A1D4P C10 N6 SING N N 3 A1D4P C12 C13 SING N N 4 A1D4P N6 C13 SING N N 5 A1D4P N6 N5 SING N N 6 A1D4P C13 O1 DOUB N N 7 A1D4P N5 C9 SING N N 8 A1D4P C4 C3 DOUB Y N 9 A1D4P C4 C5 SING Y N 10 A1D4P C3 C2 SING Y N 11 A1D4P C9 N4 DOUB Y N 12 A1D4P C9 C14 SING Y N 13 A1D4P C5 C14 SING Y N 14 A1D4P C5 C6 DOUB Y N 15 A1D4P N4 C8 SING Y N 16 A1D4P C2 C1 DOUB Y N 17 A1D4P C14 C7 DOUB Y N 18 A1D4P C6 C1 SING Y N 19 A1D4P C6 N2 SING Y N 20 A1D4P C1 N1 SING N N 21 A1D4P C8 N3 DOUB Y N 22 A1D4P C7 N2 SING Y N 23 A1D4P C7 N3 SING Y N 24 A1D4P C11 H11 SING N N 25 A1D4P C11 H12 SING N N 26 A1D4P C12 H13 SING N N 27 A1D4P C12 H14 SING N N 28 A1D4P C10 H9 SING N N 29 A1D4P C10 H10 SING N N 30 A1D4P C2 H3 SING N N 31 A1D4P C3 H4 SING N N 32 A1D4P C4 H5 SING N N 33 A1D4P C8 H7 SING N N 34 A1D4P N1 H1 SING N N 35 A1D4P N1 H2 SING N N 36 A1D4P N2 H6 SING N N 37 A1D4P N5 H8 SING N N 38 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1D4P SMILES ACDLabs 14.52 "Nc1cccc2c3c(ncnc3[NH]c21)NN1CCCC1=O" A1D4P InChI InChI 1.06 "InChI=1S/C14H14N6O/c15-9-4-1-3-8-11-13(18-12(8)9)16-7-17-14(11)19-20-6-2-5-10(20)21/h1,3-4,7H,2,5-6,15H2,(H2,16,17,18,19)" A1D4P InChIKey InChI 1.06 BTYOVCSMYZFMTL-UHFFFAOYSA-N A1D4P SMILES_CANONICAL CACTVS 3.385 "Nc1cccc2c1[nH]c3ncnc(NN4CCCC4=O)c23" A1D4P SMILES CACTVS 3.385 "Nc1cccc2c1[nH]c3ncnc(NN4CCCC4=O)c23" A1D4P SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1cc2c3c([nH]c2c(c1)N)ncnc3NN4CCCC4=O" A1D4P SMILES "OpenEye OEToolkits" 3.1.0.0 "c1cc2c3c([nH]c2c(c1)N)ncnc3NN4CCCC4=O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1D4P "SYSTEMATIC NAME" ACDLabs 14.52 "1-[(8-amino-9H-pyrimido[4,5-b]indol-4-yl)amino]pyrrolidin-2-one" A1D4P "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "1-[(8-azanyl-9~{H}-pyrimido[4,5-b]indol-4-yl)amino]pyrrolidin-2-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1D4P "Create component" 2026-09-03 RCSB A1D4P "Initial release" 2026-11-04 RCSB #