data_A1D55 # _chem_comp.id A1D55 _chem_comp.name "(5~{S},5~{a}~{S},8~{a}~{R},9~{R})-5-(quinolin-6-ylamino)-9-(3,4,5-trimethoxyphenyl)-5~{a},6,8~{a},9-tetrahydro-5~{H}-[2]benzofuro[6,5-f][1,3]benzodioxol-8-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C31 H28 N2 O7" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-02-12 _chem_comp.pdbx_modified_date 2024-10-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 540.563 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1D55 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8WMU _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBC _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1D55 N1 N1 N 0 1 N N N N N N -19.086 67.406 -46.407 2.320 0.447 0.548 N1 A1D55 1 A1D55 C4 C1 C 0 1 Y N N N N N -18.053 63.258 -43.827 -1.703 2.539 1.257 C4 A1D55 2 A1D55 C5 C2 C 0 1 Y N N N N N -18.310 64.646 -43.833 -0.893 1.458 0.902 C5 A1D55 3 A1D55 C6 C3 C 0 1 Y N N N N N -18.290 65.330 -45.045 0.230 1.634 0.124 C6 A1D55 4 A1D55 C7 C4 C 0 1 N N R N N N -18.577 65.361 -42.522 -1.321 0.101 1.432 C7 A1D55 5 A1D55 C8 C5 C 0 1 N N R N N N -19.552 66.463 -42.874 -0.126 -0.826 1.354 C8 A1D55 6 A1D55 C10 C6 C 0 1 N N S N N N -18.530 66.854 -45.185 1.126 0.483 -0.300 C10 A1D55 7 A1D55 C13 C7 C 0 1 N N N N N N -20.049 68.577 -43.700 1.187 -2.089 -0.127 C13 A1D55 8 A1D55 C15 C8 C 0 1 Y N N N N N -17.384 65.829 -40.280 -3.407 -1.255 1.163 C15 A1D55 9 A1D55 C17 C9 C 0 1 Y N N N N N -15.023 66.374 -40.259 -4.517 -1.443 -0.960 C17 A1D55 10 A1D55 C20 C10 C 0 1 N N N N N N -17.405 66.048 -37.505 -5.246 -2.842 2.350 C20 A1D55 11 A1D55 C21 C11 C 0 1 N N N N N N -13.068 65.548 -39.366 -6.720 -1.145 -1.806 C21 A1D55 12 A1D55 C22 C12 C 0 1 N N N N N N -14.105 66.861 -43.720 -2.575 0.510 -3.382 C22 A1D55 13 A1D55 C24 C13 C 0 1 Y N N N N N -20.347 69.423 -46.859 4.630 -0.128 0.852 C24 A1D55 14 A1D55 C26 C14 C 0 1 Y N N N N N -19.218 71.506 -47.388 5.929 -0.929 -1.050 C26 A1D55 15 A1D55 C28 C15 C 0 1 Y N N N N N -17.975 69.485 -46.960 3.619 -0.358 -1.326 C28 A1D55 16 A1D55 C1 C16 C 0 1 Y N N N N N -18.036 64.625 -46.228 0.605 2.901 -0.328 C1 A1D55 17 A1D55 C11 C17 C 0 1 N N N N N N -17.052 61.240 -46.586 -0.932 5.980 0.654 C11 A1D55 18 A1D55 C12 C18 C 0 1 N N N N N N -20.096 67.359 -41.804 -0.390 -2.287 1.569 C12 A1D55 19 A1D55 C14 C19 C 0 1 Y N N N N N -17.398 65.734 -41.673 -2.445 -0.445 0.589 C14 A1D55 20 A1D55 C16 C20 C 0 1 Y N N N N N -16.223 66.148 -39.577 -4.443 -1.758 0.392 C16 A1D55 21 A1D55 C18 C21 C 0 1 Y N N N N N -15.029 66.263 -41.639 -3.545 -0.632 -1.535 C18 A1D55 22 A1D55 C19 C22 C 0 1 Y N N N N N -16.200 65.943 -42.314 -2.512 -0.133 -0.756 C19 A1D55 23 A1D55 C2 C23 C 0 1 Y N N N N N -17.798 63.273 -46.203 -0.193 3.977 0.021 C2 A1D55 24 A1D55 C23 C24 C 0 1 Y N N N N N -19.151 68.746 -46.747 3.532 -0.015 0.028 C23 A1D55 25 A1D55 C25 C25 C 0 1 Y N N N N N -20.397 70.787 -47.180 5.845 -0.588 0.323 C25 A1D55 26 A1D55 C27 C26 C 0 1 Y N N N N N -18.001 70.804 -47.264 4.788 -0.801 -1.862 C27 A1D55 27 A1D55 C29 C27 C 0 1 Y N N N N N -21.598 71.519 -47.308 6.991 -0.719 1.131 C29 A1D55 28 A1D55 C3 C28 C 0 1 Y N N N N N -17.802 62.589 -45.004 -1.344 3.796 0.803 C3 A1D55 29 A1D55 C30 C29 C 0 1 Y N N N N N -21.571 72.844 -47.616 8.141 -1.172 0.549 C30 A1D55 30 A1D55 C31 C30 C 0 1 Y N N N N N -20.321 73.492 -47.821 8.155 -1.490 -0.807 C31 A1D55 31 A1D55 C9 C31 C 0 1 N N S N N N -18.990 67.478 -43.828 0.342 -0.805 -0.137 C9 A1D55 32 A1D55 N2 N2 N 0 1 Y N N N N N -19.174 72.860 -47.710 7.087 -1.367 -1.556 N2 A1D55 33 A1D55 O1 O1 O 0 1 N N N N N N -17.530 62.398 -47.206 -0.070 5.291 -0.276 O1 A1D55 34 A1D55 O2 O2 O 0 1 N N N N N N -17.543 61.286 -45.268 -1.935 4.998 0.992 O2 A1D55 35 A1D55 O3 O3 O 0 1 N N N N N N -20.337 68.597 -42.324 0.407 -2.991 0.732 O3 A1D55 36 A1D55 O4 O4 O 0 1 N N N N N N -20.336 67.151 -40.648 -1.180 -2.755 2.356 O4 A1D55 37 A1D55 O5 O5 O 0 1 N N N N N N -16.212 66.255 -38.219 -5.385 -2.560 0.956 O5 A1D55 38 A1D55 O6 O6 O 0 1 N N N N N N -13.872 66.663 -39.643 -5.532 -1.935 -1.721 O6 A1D55 39 A1D55 O7 O7 O 0 1 N N N N N N -13.909 66.457 -42.396 -3.607 -0.329 -2.859 O7 A1D55 40 A1D55 H1 H1 H 0 1 N N N N N N -20.033 67.085 -46.431 2.271 0.747 1.469 H1 A1D55 41 A1D55 H2 H2 H 0 1 N N N N N N -18.053 62.717 -42.892 -2.585 2.397 1.865 H2 A1D55 42 A1D55 H3 H3 H 0 1 N N N N N N -19.156 64.647 -41.918 -1.648 0.195 2.467 H3 A1D55 43 A1D55 H4 H4 H 0 1 N N N N N N -20.411 65.989 -43.371 0.665 -0.482 2.020 H4 A1D55 44 A1D55 H5 H5 H 0 1 N N N N N N -17.494 67.219 -45.234 1.418 0.608 -1.343 H5 A1D55 45 A1D55 H6 H6 H 0 1 N N N N N N -19.651 69.547 -44.032 1.278 -2.498 -1.133 H6 A1D55 46 A1D55 H7 H7 H 0 1 N N N N N N -20.946 68.329 -44.286 2.171 -1.903 0.303 H7 A1D55 47 A1D55 H8 H8 H 0 1 N N N N N N -18.297 65.651 -39.732 -3.348 -1.500 2.214 H8 A1D55 48 A1D55 H9 H9 H 0 1 N N N N N N -17.215 66.173 -36.429 -6.061 -3.490 2.673 H9 A1D55 49 A1D55 H10 H10 H 0 1 N N N N N N -18.159 66.779 -37.831 -4.293 -3.342 2.526 H10 A1D55 50 A1D55 H11 H11 H 0 1 N N N N N N -17.775 65.030 -37.697 -5.278 -1.910 2.915 H11 A1D55 51 A1D55 H12 H12 H 0 1 N N N N N N -12.147 65.876 -38.862 -6.480 -0.172 -2.233 H12 A1D55 52 A1D55 H13 H13 H 0 1 N N N N N N -13.617 64.854 -38.712 -7.448 -1.651 -2.441 H13 A1D55 53 A1D55 H14 H14 H 0 1 N N N N N N -12.810 65.039 -40.307 -7.140 -1.011 -0.809 H14 A1D55 54 A1D55 H15 H15 H 0 1 N N N N N N -13.130 66.981 -44.215 -2.743 0.672 -4.446 H15 A1D55 55 A1D55 H16 H16 H 0 1 N N N N N N -14.695 66.100 -44.252 -2.587 1.467 -2.861 H16 A1D55 56 A1D55 H17 H17 H 0 1 N N N N N N -14.644 67.820 -43.735 -1.608 0.029 -3.236 H17 A1D55 57 A1D55 H18 H18 H 0 1 N N N N N N -21.271 68.888 -46.695 4.557 0.138 1.896 H18 A1D55 58 A1D55 H19 H19 H 0 1 N N N N N N -17.021 68.985 -46.879 2.748 -0.263 -1.957 H19 A1D55 59 A1D55 H20 H20 H 0 1 N N N N N N -18.027 65.151 -47.171 1.493 3.038 -0.927 H20 A1D55 60 A1D55 H21 H21 H 0 1 N N N N N N -17.426 60.345 -47.104 -0.375 6.279 1.542 H21 A1D55 61 A1D55 H22 H22 H 0 1 N N N N N N -15.952 61.231 -46.586 -1.391 6.848 0.182 H22 A1D55 62 A1D55 H23 H23 H 0 1 N N N N N N -16.168 65.854 -43.390 -1.759 0.500 -1.201 H23 A1D55 63 A1D55 H24 H24 H 0 1 N N N N N N -17.070 71.330 -47.415 4.839 -1.058 -2.910 H24 A1D55 64 A1D55 H25 H25 H 0 1 N N N N N N -22.546 71.023 -47.160 6.962 -0.467 2.181 H25 A1D55 65 A1D55 H26 H26 H 0 1 N N N N N N -22.492 73.400 -47.704 9.038 -1.284 1.140 H26 A1D55 66 A1D55 H27 H27 H 0 1 N N N N N N -20.314 74.541 -48.077 9.071 -1.847 -1.254 H27 A1D55 67 A1D55 H28 H28 H 0 1 N N N N N N -18.079 67.876 -43.358 -0.487 -0.868 -0.841 H28 A1D55 68 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1D55 C31 N2 DOUB Y N 1 A1D55 C31 C30 SING Y N 2 A1D55 N2 C26 SING Y N 3 A1D55 C30 C29 DOUB Y N 4 A1D55 C26 C27 DOUB Y N 5 A1D55 C26 C25 SING Y N 6 A1D55 C29 C25 SING Y N 7 A1D55 C27 C28 SING Y N 8 A1D55 O1 C11 SING N N 9 A1D55 O1 C2 SING N N 10 A1D55 C25 C24 DOUB Y N 11 A1D55 C28 C23 DOUB Y N 12 A1D55 C24 C23 SING Y N 13 A1D55 C23 N1 SING N N 14 A1D55 C11 O2 SING N N 15 A1D55 N1 C10 SING N N 16 A1D55 C1 C2 DOUB Y N 17 A1D55 C1 C6 SING Y N 18 A1D55 C2 C3 SING Y N 19 A1D55 O2 C3 SING N N 20 A1D55 C10 C6 SING N N 21 A1D55 C10 C9 SING N N 22 A1D55 C6 C5 DOUB Y N 23 A1D55 C3 C4 DOUB Y N 24 A1D55 C5 C4 SING Y N 25 A1D55 C5 C7 SING N N 26 A1D55 C9 C13 SING N N 27 A1D55 C9 C8 SING N N 28 A1D55 C22 O7 SING N N 29 A1D55 C13 O3 SING N N 30 A1D55 C8 C7 SING N N 31 A1D55 C8 C12 SING N N 32 A1D55 C7 C14 SING N N 33 A1D55 O7 C18 SING N N 34 A1D55 O3 C12 SING N N 35 A1D55 C19 C14 DOUB Y N 36 A1D55 C19 C18 SING Y N 37 A1D55 C12 O4 DOUB N N 38 A1D55 C14 C15 SING Y N 39 A1D55 C18 C17 DOUB Y N 40 A1D55 C15 C16 DOUB Y N 41 A1D55 C17 O6 SING N N 42 A1D55 C17 C16 SING Y N 43 A1D55 O6 C21 SING N N 44 A1D55 C16 O5 SING N N 45 A1D55 O5 C20 SING N N 46 A1D55 N1 H1 SING N N 47 A1D55 C4 H2 SING N N 48 A1D55 C7 H3 SING N N 49 A1D55 C8 H4 SING N N 50 A1D55 C10 H5 SING N N 51 A1D55 C13 H6 SING N N 52 A1D55 C13 H7 SING N N 53 A1D55 C15 H8 SING N N 54 A1D55 C20 H9 SING N N 55 A1D55 C20 H10 SING N N 56 A1D55 C20 H11 SING N N 57 A1D55 C21 H12 SING N N 58 A1D55 C21 H13 SING N N 59 A1D55 C21 H14 SING N N 60 A1D55 C22 H15 SING N N 61 A1D55 C22 H16 SING N N 62 A1D55 C22 H17 SING N N 63 A1D55 C24 H18 SING N N 64 A1D55 C28 H19 SING N N 65 A1D55 C1 H20 SING N N 66 A1D55 C11 H21 SING N N 67 A1D55 C11 H22 SING N N 68 A1D55 C19 H23 SING N N 69 A1D55 C27 H24 SING N N 70 A1D55 C29 H25 SING N N 71 A1D55 C30 H26 SING N N 72 A1D55 C31 H27 SING N N 73 A1D55 C9 H28 SING N N 74 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1D55 InChI InChI 1.06 "InChI=1S/C31H28N2O7/c1-35-25-10-17(11-26(36-2)30(25)37-3)27-19-12-23-24(40-15-39-23)13-20(19)29(21-14-38-31(34)28(21)27)33-18-6-7-22-16(9-18)5-4-8-32-22/h4-13,21,27-29,33H,14-15H2,1-3H3/t21-,27+,28-,29+/m0/s1" A1D55 InChIKey InChI 1.06 CKAQZFBCKGLIQY-MHTDFPPDSA-N A1D55 SMILES_CANONICAL CACTVS 3.385 "COc1cc(cc(OC)c1OC)[C@H]2[C@@H]3[C@H](COC3=O)[C@H](Nc4ccc5ncccc5c4)c6cc7OCOc7cc26" A1D55 SMILES CACTVS 3.385 "COc1cc(cc(OC)c1OC)[CH]2[CH]3[CH](COC3=O)[CH](Nc4ccc5ncccc5c4)c6cc7OCOc7cc26" A1D55 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "COc1cc(cc(c1OC)OC)[C@@H]2c3cc4c(cc3[C@H]([C@@H]5[C@@H]2C(=O)OC5)Nc6ccc7c(c6)cccn7)OCO4" A1D55 SMILES "OpenEye OEToolkits" 2.0.7 "COc1cc(cc(c1OC)OC)C2c3cc4c(cc3C(C5C2C(=O)OC5)Nc6ccc7c(c6)cccn7)OCO4" # _pdbx_chem_comp_identifier.comp_id A1D55 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(5~{S},5~{a}~{S},8~{a}~{R},9~{R})-5-(quinolin-6-ylamino)-9-(3,4,5-trimethoxyphenyl)-5~{a},6,8~{a},9-tetrahydro-5~{H}-[2]benzofuro[6,5-f][1,3]benzodioxol-8-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1D55 "Create component" 2024-02-12 PDBC A1D55 "Modify descriptor" 2024-09-20 PDBC A1D55 "Modify name" 2024-09-20 PDBC A1D55 "Initial release" 2024-10-09 RCSB #