data_A1D5J # _chem_comp.id A1D5J _chem_comp.name "(2~{S})-2-(4,6-dimethylpyrimidin-2-yl)oxy-3-methoxy-3,3-diphenyl-propanoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C22 H22 N2 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms Ambrisentan _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-01-19 _chem_comp.pdbx_modified_date 2024-08-23 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 378.421 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1D5J _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8XVK _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBC # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1D5J C1 C1 C 0 1 N N N N N N 154.694 150.855 162.197 -3.538 2.328 2.340 C1 A1D5J 1 A1D5J C10 C2 C 0 1 Y N N N N N 156.491 152.016 168.260 3.801 0.283 -0.346 C10 A1D5J 2 A1D5J C11 C3 C 0 1 Y N N N N N 156.839 153.356 168.207 4.860 0.932 0.261 C11 A1D5J 3 A1D5J C12 C4 C 0 1 Y N N N N N 156.268 154.254 169.078 4.634 1.761 1.344 C12 A1D5J 4 A1D5J C13 C5 C 0 1 Y N N N N N 155.350 153.825 170.005 3.348 1.941 1.820 C13 A1D5J 5 A1D5J C14 C6 C 0 1 Y N N N N N 154.993 152.487 170.068 2.289 1.291 1.214 C14 A1D5J 6 A1D5J C15 C7 C 0 1 Y N N N N N 153.669 149.975 169.644 1.146 -1.582 0.119 C15 A1D5J 7 A1D5J C16 C8 C 0 1 Y N N N N N 152.651 150.083 168.692 0.287 -1.696 1.197 C16 A1D5J 8 A1D5J C17 C9 C 0 1 Y N N N N N 151.320 149.989 169.064 0.086 -2.928 1.792 C17 A1D5J 9 A1D5J C18 C10 C 0 1 Y N N N N N 150.982 149.779 170.381 0.742 -4.044 1.310 C18 A1D5J 10 A1D5J C19 C11 C 0 1 Y N N N N N 151.964 149.662 171.334 1.600 -3.930 0.232 C19 A1D5J 11 A1D5J C2 C12 C 0 1 Y N N N N N 155.352 150.159 163.351 -3.462 1.304 1.237 C2 A1D5J 12 A1D5J C20 C13 C 0 1 Y N N N N N 153.298 149.756 170.974 1.802 -2.699 -0.363 C20 A1D5J 13 A1D5J C21 C14 C 0 1 N N N N N N 157.303 149.363 170.143 0.626 -1.114 -2.642 C21 A1D5J 14 A1D5J C22 C15 C 0 1 N N N N N N 158.130 147.796 164.227 -5.700 -1.045 -0.689 C22 A1D5J 15 A1D5J C3 C16 C 0 1 Y N N N N N 156.429 149.318 163.172 -4.602 0.638 0.818 C3 A1D5J 16 A1D5J C4 C17 C 0 1 Y N N N N N 156.958 148.730 164.300 -4.487 -0.296 -0.200 C4 A1D5J 17 A1D5J C5 C18 C 0 1 Y N N N N N 155.421 149.784 165.580 -2.229 0.131 -0.311 C5 A1D5J 18 A1D5J C6 C19 C 0 1 N N S N N N 155.464 149.321 167.917 0.095 0.606 -0.388 C6 A1D5J 19 A1D5J C7 C20 C 0 1 N N N N N N 154.984 147.867 167.938 0.250 1.881 -1.176 C7 A1D5J 20 A1D5J C8 C21 C 0 1 N N N N N N 155.154 150.073 169.268 1.360 -0.241 -0.534 C8 A1D5J 21 A1D5J C9 C22 C 0 1 Y N N N N N 155.556 151.554 169.192 2.516 0.462 0.131 C9 A1D5J 22 A1D5J N1 N1 N 0 1 Y N N N N N 156.460 148.959 165.500 -3.299 -0.522 -0.736 N1 A1D5J 23 A1D5J N2 N2 N 0 1 Y N N N N N 154.847 150.393 164.547 -2.305 1.033 0.655 N2 A1D5J 24 A1D5J O1 O1 O 0 1 N N N N N N 154.902 150.027 166.792 -1.028 -0.126 -0.882 O1 A1D5J 25 A1D5J O2 O2 O 0 1 N N N N N N 155.426 147.100 168.817 1.105 2.828 -0.759 O2 A1D5J 26 A1D5J O3 O3 O 0 1 N N N N N N 154.160 147.497 167.078 -0.395 2.051 -2.183 O3 A1D5J 27 A1D5J O4 O4 O 0 1 N N N N N N 155.891 149.447 170.312 1.651 -0.428 -1.921 O4 A1D5J 28 A1D5J H1 H1 H 0 1 N N N N N N 153.861 151.472 162.566 -3.735 3.310 1.911 H1 A1D5J 29 A1D5J H2 H2 H 0 1 N N N N N N 155.429 151.497 161.689 -4.343 2.064 3.026 H2 A1D5J 30 A1D5J H3 H3 H 0 1 N N N N N N 154.309 150.107 161.489 -2.592 2.351 2.881 H3 A1D5J 31 A1D5J H4 H4 H 0 1 N N N N N N 156.948 151.319 167.573 3.977 -0.361 -1.195 H4 A1D5J 32 A1D5J H5 H5 H 0 1 N N N N N N 157.561 153.696 167.479 5.864 0.792 -0.112 H5 A1D5J 33 A1D5J H6 H6 H 0 1 N N N N N N 156.542 155.298 169.033 5.461 2.268 1.818 H6 A1D5J 34 A1D5J H7 H7 H 0 1 N N N N N N 154.904 154.533 170.688 3.172 2.588 2.666 H7 A1D5J 35 A1D5J H8 H8 H 0 1 N N N N N N 154.271 152.161 170.803 1.285 1.431 1.586 H8 A1D5J 36 A1D5J H9 H9 H 0 1 N N N N N N 152.905 150.242 167.654 -0.226 -0.824 1.573 H9 A1D5J 37 A1D5J H10 H10 H 0 1 N N N N N N 150.545 150.081 168.318 -0.584 -3.017 2.635 H10 A1D5J 38 A1D5J H11 H11 H 0 1 N N N N N N 149.943 149.706 170.666 0.585 -5.006 1.776 H11 A1D5J 39 A1D5J H12 H12 H 0 1 N N N N N N 151.695 149.496 172.367 2.112 -4.803 -0.145 H12 A1D5J 40 A1D5J H13 H13 H 0 1 N N N N N N 154.062 149.659 171.731 2.473 -2.610 -1.205 H13 A1D5J 41 A1D5J H14 H14 H 0 1 N N N N N N 157.748 148.861 171.015 0.364 -2.032 -2.116 H14 A1D5J 42 A1D5J H15 H15 H 0 1 N N N N N N 157.530 148.788 169.233 -0.254 -0.475 -2.719 H15 A1D5J 43 A1D5J H16 H16 H 0 1 N N N N N N 157.722 150.376 170.050 0.986 -1.358 -3.642 H16 A1D5J 44 A1D5J H17 H17 H 0 1 N N N N N N 158.384 147.446 165.238 -6.166 -0.489 -1.503 H17 A1D5J 45 A1D5J H18 H18 H 0 1 N N N N N N 157.873 146.934 163.595 -5.399 -2.029 -1.047 H18 A1D5J 46 A1D5J H19 H19 H 0 1 N N N N N N 158.993 148.324 163.794 -6.412 -1.158 0.129 H19 A1D5J 47 A1D5J H20 H20 H 0 1 N N N N N N 156.840 149.128 162.191 -5.560 0.842 1.273 H20 A1D5J 48 A1D5J H21 H21 H 0 1 N N N N N N 156.558 149.304 167.806 -0.062 0.846 0.664 H21 A1D5J 49 A1D5J H22 H22 H 0 1 N N N N N N 155.039 146.239 168.710 1.171 3.629 -1.298 H22 A1D5J 50 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1D5J C1 C2 SING N N 1 A1D5J C3 C2 DOUB Y N 2 A1D5J C3 C4 SING Y N 3 A1D5J C2 N2 SING Y N 4 A1D5J C22 C4 SING N N 5 A1D5J C4 N1 DOUB Y N 6 A1D5J N2 C5 DOUB Y N 7 A1D5J N1 C5 SING Y N 8 A1D5J C5 O1 SING N N 9 A1D5J O1 C6 SING N N 10 A1D5J O3 C7 DOUB N N 11 A1D5J C6 C7 SING N N 12 A1D5J C6 C8 SING N N 13 A1D5J C7 O2 SING N N 14 A1D5J C11 C10 DOUB Y N 15 A1D5J C11 C12 SING Y N 16 A1D5J C10 C9 SING Y N 17 A1D5J C16 C17 DOUB Y N 18 A1D5J C16 C15 SING Y N 19 A1D5J C17 C18 SING Y N 20 A1D5J C12 C13 DOUB Y N 21 A1D5J C9 C8 SING N N 22 A1D5J C9 C14 DOUB Y N 23 A1D5J C8 C15 SING N N 24 A1D5J C8 O4 SING N N 25 A1D5J C15 C20 DOUB Y N 26 A1D5J C13 C14 SING Y N 27 A1D5J C21 O4 SING N N 28 A1D5J C18 C19 DOUB Y N 29 A1D5J C20 C19 SING Y N 30 A1D5J C1 H1 SING N N 31 A1D5J C1 H2 SING N N 32 A1D5J C1 H3 SING N N 33 A1D5J C10 H4 SING N N 34 A1D5J C11 H5 SING N N 35 A1D5J C12 H6 SING N N 36 A1D5J C13 H7 SING N N 37 A1D5J C14 H8 SING N N 38 A1D5J C16 H9 SING N N 39 A1D5J C17 H10 SING N N 40 A1D5J C18 H11 SING N N 41 A1D5J C19 H12 SING N N 42 A1D5J C20 H13 SING N N 43 A1D5J C21 H14 SING N N 44 A1D5J C21 H15 SING N N 45 A1D5J C21 H16 SING N N 46 A1D5J C22 H17 SING N N 47 A1D5J C22 H18 SING N N 48 A1D5J C22 H19 SING N N 49 A1D5J C3 H20 SING N N 50 A1D5J C6 H21 SING N N 51 A1D5J O2 H22 SING N N 52 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1D5J InChI InChI 1.06 "InChI=1S/C22H22N2O4/c1-15-14-16(2)24-21(23-15)28-19(20(25)26)22(27-3,17-10-6-4-7-11-17)18-12-8-5-9-13-18/h4-14,19H,1-3H3,(H,25,26)/t19-/m1/s1" A1D5J InChIKey InChI 1.06 OUJTZYPIHDYQMC-LJQANCHMSA-N A1D5J SMILES_CANONICAL CACTVS 3.385 "COC([C@H](Oc1nc(C)cc(C)n1)C(O)=O)(c2ccccc2)c3ccccc3" A1D5J SMILES CACTVS 3.385 "COC([CH](Oc1nc(C)cc(C)n1)C(O)=O)(c2ccccc2)c3ccccc3" A1D5J SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1cc(nc(n1)O[C@H](C(=O)O)C(c2ccccc2)(c3ccccc3)OC)C" A1D5J SMILES "OpenEye OEToolkits" 2.0.7 "Cc1cc(nc(n1)OC(C(=O)O)C(c2ccccc2)(c3ccccc3)OC)C" # _pdbx_chem_comp_identifier.comp_id A1D5J _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{S})-2-(4,6-dimethylpyrimidin-2-yl)oxy-3-methoxy-3,3-diphenyl-propanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1D5J "Create component" 2024-01-19 PDBC A1D5J "Initial release" 2024-08-28 RCSB # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id A1D5J _pdbx_chem_comp_synonyms.name Ambrisentan _pdbx_chem_comp_synonyms.provenance PUBCHEM _pdbx_chem_comp_synonyms.type ? #