data_A1D5L # _chem_comp.id A1D5L _chem_comp.name "~{N}-(3-methoxy-5-methyl-pyrazin-2-yl)-2-[4-(1,3,4-oxadiazol-2-yl)phenyl]pyridine-3-sulfonamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C19 H16 N6 O4 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms Zibotentan _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-01-22 _chem_comp.pdbx_modified_date 2024-08-23 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 424.433 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1D5L _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8XVL _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBC # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1D5L C11 C1 C 0 1 Y N N N N N 166.873 168.302 176.476 1.843 -2.309 0.636 C11 A1D5L 1 A1D5L C15 C2 C 0 1 Y N N N N N 170.552 169.766 181.652 -4.072 0.108 -0.182 C15 A1D5L 2 A1D5L C16 C3 C 0 1 Y N N N N N 170.946 169.946 180.334 -3.608 -0.578 -1.307 C16 A1D5L 3 A1D5L C17 C4 C 0 1 Y N N N N N 170.193 169.417 179.310 -2.442 -1.306 -1.236 C17 A1D5L 4 A1D5L C18 C5 C 0 1 Y N N N N N 171.342 170.326 182.738 -5.326 0.886 -0.255 C18 A1D5L 5 A1D5L C12 C6 C 0 1 Y N N N N N 169.025 168.708 179.565 -1.724 -1.360 -0.041 C12 A1D5L 6 A1D5L C14 C7 C 0 1 Y N N N N N 169.389 169.054 181.923 -3.353 0.053 1.014 C14 A1D5L 7 A1D5L C1 C8 C 0 1 N N N N N N 167.353 171.709 170.947 5.437 1.140 -3.220 C1 A1D5L 8 A1D5L C10 C9 C 0 1 Y N N N N N 166.782 166.925 176.468 1.821 -3.614 0.165 C10 A1D5L 9 A1D5L C13 C10 C 0 1 Y N N N N N 168.646 168.525 180.890 -2.187 -0.676 1.083 C13 A1D5L 10 A1D5L C19 C11 C 0 1 Y N N N N N 171.827 170.880 184.773 -7.115 1.852 -0.971 C19 A1D5L 11 A1D5L C2 C12 C 0 1 Y N N N N N 167.177 171.591 172.429 4.581 1.000 -1.988 C2 A1D5L 12 A1D5L C3 C13 C 0 1 Y N N N N N 167.795 170.597 173.178 3.307 0.478 -2.091 C3 A1D5L 13 A1D5L C4 C14 C 0 1 Y N N N N N 166.847 171.376 175.087 3.013 0.727 0.170 C4 A1D5L 14 A1D5L C5 C15 C 0 1 Y N N N N N 166.225 172.393 174.329 4.307 1.251 0.274 C5 A1D5L 15 A1D5L C6 C16 C 0 1 N N N N N N 164.873 174.332 174.199 6.120 2.160 1.513 C6 A1D5L 16 A1D5L C7 C17 C 0 1 Y N N N N N 167.607 168.931 177.470 0.679 -1.564 0.572 C7 A1D5L 17 A1D5L C8 C18 C 0 1 Y N N N N N 168.215 168.138 178.456 -0.468 -2.145 0.034 C8 A1D5L 18 A1D5L C9 C19 C 0 1 Y N N N N N 167.421 166.219 177.456 0.646 -4.129 -0.351 C9 A1D5L 19 A1D5L N1 N1 N 0 1 Y N N N N N 167.634 170.506 174.507 2.549 0.352 -1.013 N1 A1D5L 20 A1D5L N2 N2 N 0 1 Y N N N N N 166.387 172.489 173.032 5.055 1.373 -0.810 N2 A1D5L 21 A1D5L N3 N3 N 0 1 N N N N N N 166.670 171.312 176.436 2.219 0.596 1.305 N3 A1D5L 22 A1D5L N4 N4 N 0 1 Y N N N N N 168.138 166.792 178.432 -0.446 -3.395 -0.410 N4 A1D5L 23 A1D5L N5 N5 N 0 1 Y N N N N N 172.485 170.916 182.711 -5.922 1.497 0.741 N5 A1D5L 24 A1D5L N6 N6 N 0 1 Y N N N N N 172.788 171.265 184.048 -6.989 2.072 0.308 N6 A1D5L 25 A1D5L O1 O1 O 0 1 N N N N N N 165.442 173.270 174.979 4.791 1.634 1.483 O1 A1D5L 26 A1D5L O2 O2 O 0 1 N N N N N N 169.034 171.057 177.034 0.069 0.879 0.127 O2 A1D5L 27 A1D5L O3 O3 O 0 1 N N N N N N 167.304 171.141 178.790 0.121 0.043 2.482 O3 A1D5L 28 A1D5L O4 O4 O 0 1 Y N N N N N 170.874 170.282 184.020 -6.068 1.104 -1.360 O4 A1D5L 29 A1D5L S1 S1 S 0 1 N N N N N N 167.734 170.694 177.503 0.647 0.096 1.162 S1 A1D5L 30 A1D5L H1 H1 H 0 1 N N N N N N 166.377 168.885 175.714 2.748 -1.886 1.048 H1 A1D5L 31 A1D5L H2 H2 H 0 1 N N N N N N 171.845 170.502 180.111 -4.163 -0.536 -2.232 H2 A1D5L 32 A1D5L H3 H3 H 0 1 N N N N N N 170.516 169.556 178.289 -2.083 -1.837 -2.106 H3 A1D5L 33 A1D5L H4 H4 H 0 1 N N N N N N 169.067 168.915 182.945 -3.713 0.579 1.886 H4 A1D5L 34 A1D5L H5 H5 H 0 1 N N N N N N 166.770 172.564 170.575 5.946 0.196 -3.418 H5 A1D5L 35 A1D5L H6 H6 H 0 1 N N N N N N 168.417 171.862 170.715 4.807 1.398 -4.072 H6 A1D5L 36 A1D5L H7 H7 H 0 1 N N N N N N 167.001 170.787 170.462 6.175 1.925 -3.063 H7 A1D5L 37 A1D5L H8 H8 H 0 1 N N N N N N 166.220 166.414 175.700 2.713 -4.222 0.201 H8 A1D5L 38 A1D5L H9 H9 H 0 1 N N N N N N 167.754 167.959 181.114 -1.631 -0.718 2.008 H9 A1D5L 39 A1D5L H10 H10 H 0 1 N N N N N N 171.774 171.010 185.844 -7.913 2.210 -1.604 H10 A1D5L 40 A1D5L H11 H11 H 0 1 N N N N N N 168.423 169.876 172.676 2.928 0.172 -3.055 H11 A1D5L 41 A1D5L H12 H12 H 0 1 N N N N N N 164.258 174.974 174.846 6.816 1.408 1.143 H12 A1D5L 42 A1D5L H13 H13 H 0 1 N N N N N N 165.680 174.930 173.750 6.173 3.047 0.882 H13 A1D5L 43 A1D5L H14 H14 H 0 1 N N N N N N 164.245 173.906 173.403 6.382 2.426 2.537 H14 A1D5L 44 A1D5L H15 H15 H 0 1 N N N N N N 167.342 165.142 177.446 0.626 -5.145 -0.719 H15 A1D5L 45 A1D5L H16 H16 H 0 1 N N N N N N 166.522 172.257 176.728 2.586 0.797 2.180 H16 A1D5L 46 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1D5L C1 C2 SING N N 1 A1D5L C2 N2 DOUB Y N 2 A1D5L C2 C3 SING Y N 3 A1D5L N2 C5 SING Y N 4 A1D5L C3 N1 DOUB Y N 5 A1D5L C6 O1 SING N N 6 A1D5L C5 O1 SING N N 7 A1D5L C5 C4 DOUB Y N 8 A1D5L N1 C4 SING Y N 9 A1D5L C4 N3 SING N N 10 A1D5L N3 S1 SING N N 11 A1D5L C10 C11 DOUB Y N 12 A1D5L C10 C9 SING Y N 13 A1D5L C11 C7 SING Y N 14 A1D5L O2 S1 DOUB N N 15 A1D5L C9 N4 DOUB Y N 16 A1D5L C7 S1 SING N N 17 A1D5L C7 C8 DOUB Y N 18 A1D5L S1 O3 DOUB N N 19 A1D5L N4 C8 SING Y N 20 A1D5L C8 C12 SING N N 21 A1D5L C17 C12 DOUB Y N 22 A1D5L C17 C16 SING Y N 23 A1D5L C12 C13 SING Y N 24 A1D5L C16 C15 DOUB Y N 25 A1D5L C13 C14 DOUB Y N 26 A1D5L C15 C14 SING Y N 27 A1D5L C15 C18 SING N N 28 A1D5L N5 C18 DOUB Y N 29 A1D5L N5 N6 SING Y N 30 A1D5L C18 O4 SING Y N 31 A1D5L O4 C19 SING Y N 32 A1D5L N6 C19 DOUB Y N 33 A1D5L C11 H1 SING N N 34 A1D5L C16 H2 SING N N 35 A1D5L C17 H3 SING N N 36 A1D5L C14 H4 SING N N 37 A1D5L C1 H5 SING N N 38 A1D5L C1 H6 SING N N 39 A1D5L C1 H7 SING N N 40 A1D5L C10 H8 SING N N 41 A1D5L C13 H9 SING N N 42 A1D5L C19 H10 SING N N 43 A1D5L C3 H11 SING N N 44 A1D5L C6 H12 SING N N 45 A1D5L C6 H13 SING N N 46 A1D5L C6 H14 SING N N 47 A1D5L C9 H15 SING N N 48 A1D5L N3 H16 SING N N 49 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1D5L InChI InChI 1.06 "InChI=1S/C19H16N6O4S/c1-12-10-21-17(19(23-12)28-2)25-30(26,27)15-4-3-9-20-16(15)13-5-7-14(8-6-13)18-24-22-11-29-18/h3-11H,1-2H3,(H,21,25)" A1D5L InChIKey InChI 1.06 FJHHZXWJVIEFGJ-UHFFFAOYSA-N A1D5L SMILES_CANONICAL CACTVS 3.385 "COc1nc(C)cnc1N[S](=O)(=O)c2cccnc2c3ccc(cc3)c4ocnn4" A1D5L SMILES CACTVS 3.385 "COc1nc(C)cnc1N[S](=O)(=O)c2cccnc2c3ccc(cc3)c4ocnn4" A1D5L SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1cnc(c(n1)OC)NS(=O)(=O)c2cccnc2c3ccc(cc3)c4nnco4" A1D5L SMILES "OpenEye OEToolkits" 2.0.7 "Cc1cnc(c(n1)OC)NS(=O)(=O)c2cccnc2c3ccc(cc3)c4nnco4" # _pdbx_chem_comp_identifier.comp_id A1D5L _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{N}-(3-methoxy-5-methyl-pyrazin-2-yl)-2-[4-(1,3,4-oxadiazol-2-yl)phenyl]pyridine-3-sulfonamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1D5L "Create component" 2024-01-22 PDBC A1D5L "Initial release" 2024-08-28 RCSB # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id A1D5L _pdbx_chem_comp_synonyms.name Zibotentan _pdbx_chem_comp_synonyms.provenance PUBCHEM _pdbx_chem_comp_synonyms.type ? #