data_A1D5Y # _chem_comp.id A1D5Y _chem_comp.name "(1~{S})-1-[10-[3-(dimethylamino)propyl]phenothiazin-2-yl]ethanol" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C19 H24 N2 O S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-02-04 _chem_comp.pdbx_modified_date 2024-10-04 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 328.472 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1D5Y _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8Y59 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBC # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1D5Y C05 C1 C 0 1 N N N N N N -24.989 24.960 7.307 3.248 -3.215 -1.041 C05 A1D5Y 1 A1D5Y C06 C2 C 0 1 N N N N N N -24.495 24.864 9.624 2.862 -5.234 0.240 C06 A1D5Y 2 A1D5Y C07 C3 C 0 1 N N N N N N -21.614 24.458 12.416 3.959 2.582 1.124 C07 A1D5Y 3 A1D5Y C08 C4 C 0 1 Y N N N N N -17.378 24.389 3.810 -4.715 -1.262 -0.580 C08 A1D5Y 4 A1D5Y C09 C5 C 0 1 Y N N N N N -18.606 25.049 3.801 -3.753 -2.245 -0.461 C09 A1D5Y 5 A1D5Y C10 C6 C 0 1 Y N N N N N -16.955 23.818 4.996 -4.381 0.062 -0.361 C10 A1D5Y 6 A1D5Y C11 C7 C 0 1 Y N N N N N -19.381 25.132 4.951 -2.455 -1.910 -0.121 C11 A1D5Y 7 A1D5Y C12 C8 C 0 1 Y N N N N N -17.512 23.461 10.228 -0.277 3.336 -0.073 C12 A1D5Y 8 A1D5Y C13 C9 C 0 1 Y N N N N N -18.179 23.879 11.379 1.100 3.379 -0.193 C13 A1D5Y 9 A1D5Y C14 C10 C 0 1 Y N N N N N -19.827 24.874 9.914 1.200 1.006 0.107 C14 A1D5Y 10 A1D5Y C15 C11 C 0 1 N N N N N N -20.744 25.710 7.406 0.001 -1.332 1.092 C15 A1D5Y 11 A1D5Y C16 C12 C 0 1 N N N N N N -23.138 26.173 8.161 1.554 -3.247 0.689 C16 A1D5Y 12 A1D5Y C17 C13 C 0 1 N N N N N N -22.116 25.114 7.660 0.724 -2.150 0.020 C17 A1D5Y 13 A1D5Y C18 C14 C 0 1 Y N N N N N -17.720 23.924 6.152 -3.082 0.407 -0.015 C18 A1D5Y 14 A1D5Y C19 C15 C 0 1 Y N N N N N -17.989 23.737 8.947 -0.923 2.125 0.136 C19 A1D5Y 15 A1D5Y C20 C16 C 0 1 Y N N N N N -18.967 24.578 6.185 -2.109 -0.582 0.103 C20 A1D5Y 16 A1D5Y C21 C17 C 0 1 Y N N N N N -19.175 24.461 8.717 -0.185 0.952 0.230 C21 A1D5Y 17 A1D5Y C22 C18 C 0 1 Y N N N N N -19.376 24.605 11.223 1.837 2.213 -0.103 C22 A1D5Y 18 A1D5Y C23 C19 C 0 1 N N S N N N -20.211 25.129 12.394 3.337 2.258 -0.235 C23 A1D5Y 19 A1D5Y N03 N1 N 0 1 N N N N N N -19.695 24.688 7.397 -0.794 -0.281 0.451 N03 A1D5Y 20 A1D5Y N04 N2 N 0 1 N N N N N N -24.464 25.661 8.433 2.248 -4.032 -0.340 N04 A1D5Y 21 A1D5Y O02 O1 O 0 1 N N N N N N -20.261 26.550 12.244 3.702 3.267 -1.179 O02 A1D5Y 22 A1D5Y S01 S1 S 0 1 N N N N N N -17.068 23.121 7.587 -2.680 2.099 0.252 S01 A1D5Y 23 A1D5Y H052 H1 H 0 0 N N N N N N -25.995 24.584 7.545 3.984 -2.849 -0.325 H052 A1D5Y 24 A1D5Y H051 H2 H 0 0 N N N N N N -25.046 25.641 6.445 3.747 -3.821 -1.797 H051 A1D5Y 25 A1D5Y H053 H3 H 0 0 N N N N N N -24.330 24.114 7.062 2.755 -2.369 -1.520 H053 A1D5Y 26 A1D5Y H062 H4 H 0 0 N N N N N N -24.082 25.442 10.464 3.585 -4.941 1.002 H062 A1D5Y 27 A1D5Y H061 H5 H 0 0 N N N N N N -25.534 24.582 9.849 2.089 -5.855 0.692 H061 A1D5Y 28 A1D5Y H063 H6 H 0 0 N N N N N N -23.893 23.956 9.473 3.369 -5.797 -0.544 H063 A1D5Y 29 A1D5Y H071 H7 H 0 0 N N N N N N -22.195 24.849 13.264 3.681 1.812 1.844 H071 A1D5Y 30 A1D5Y H073 H8 H 0 0 N N N N N N -22.141 24.681 11.477 5.045 2.615 1.029 H073 A1D5Y 31 A1D5Y H072 H9 H 0 0 N N N N N N -21.498 23.369 12.522 3.596 3.550 1.469 H072 A1D5Y 32 A1D5Y H081 H10 H 0 0 N N N N N N -16.775 24.326 2.916 -5.727 -1.526 -0.850 H081 A1D5Y 33 A1D5Y H091 H11 H 0 0 N N N N N N -18.960 25.502 2.887 -4.014 -3.279 -0.633 H091 A1D5Y 34 A1D5Y H101 H12 H 0 0 N N N N N N -16.018 23.282 5.025 -5.134 0.831 -0.458 H101 A1D5Y 35 A1D5Y H111 H13 H 0 0 N N N N N N -20.334 25.638 4.901 -1.707 -2.683 -0.029 H111 A1D5Y 36 A1D5Y H121 H14 H 0 0 N N N N N N -16.593 22.903 10.332 -0.852 4.248 -0.144 H121 A1D5Y 37 A1D5Y H131 H15 H 0 0 N N N N N N -17.790 23.653 12.361 1.599 4.322 -0.356 H131 A1D5Y 38 A1D5Y H141 H16 H 0 0 N N N N N N -20.741 25.439 9.811 1.780 0.097 0.177 H141 A1D5Y 39 A1D5Y H151 H17 H 0 0 N N N N N N -20.522 26.440 8.198 -0.656 -1.985 1.666 H151 A1D5Y 40 A1D5Y H152 H18 H 0 0 N N N N N N -20.753 26.219 6.431 0.734 -0.877 1.758 H152 A1D5Y 41 A1D5Y H161 H19 H 0 0 N N N N N N -22.745 26.614 9.089 2.287 -2.792 1.355 H161 A1D5Y 42 A1D5Y H162 H20 H 0 0 N N N N N N -23.225 26.954 7.392 0.897 -3.900 1.263 H162 A1D5Y 43 A1D5Y H171 H21 H 0 0 N N N N N N -22.491 24.677 6.723 -0.010 -2.604 -0.646 H171 A1D5Y 44 A1D5Y H172 H22 H 0 0 N N N N N N -22.023 24.325 8.421 1.380 -1.496 -0.555 H172 A1D5Y 45 A1D5Y H231 H23 H 0 0 N N N N N N -19.695 24.872 13.331 3.701 1.290 -0.580 H231 A1D5Y 46 A1D5Y H021 H25 H 0 0 N N N N N N -20.772 26.926 12.951 4.656 3.352 -1.315 H021 A1D5Y 47 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1D5Y C09 C08 DOUB Y N 1 A1D5Y C09 C11 SING Y N 2 A1D5Y C08 C10 SING Y N 3 A1D5Y C11 C20 DOUB Y N 4 A1D5Y C10 C18 DOUB Y N 5 A1D5Y C18 C20 SING Y N 6 A1D5Y C18 S01 SING N N 7 A1D5Y C20 N03 SING N N 8 A1D5Y C05 N04 SING N N 9 A1D5Y N03 C15 SING N N 10 A1D5Y N03 C21 SING N N 11 A1D5Y C15 C17 SING N N 12 A1D5Y S01 C19 SING N N 13 A1D5Y C17 C16 SING N N 14 A1D5Y C16 N04 SING N N 15 A1D5Y N04 C06 SING N N 16 A1D5Y C21 C19 DOUB Y N 17 A1D5Y C21 C14 SING Y N 18 A1D5Y C19 C12 SING Y N 19 A1D5Y C14 C22 DOUB Y N 20 A1D5Y C12 C13 DOUB Y N 21 A1D5Y C22 C13 SING Y N 22 A1D5Y C22 C23 SING N N 23 A1D5Y O02 C23 SING N N 24 A1D5Y C23 C07 SING N N 25 A1D5Y C05 H052 SING N N 26 A1D5Y C05 H051 SING N N 27 A1D5Y C05 H053 SING N N 28 A1D5Y C06 H062 SING N N 29 A1D5Y C06 H061 SING N N 30 A1D5Y C06 H063 SING N N 31 A1D5Y C07 H071 SING N N 32 A1D5Y C07 H073 SING N N 33 A1D5Y C07 H072 SING N N 34 A1D5Y C08 H081 SING N N 35 A1D5Y C09 H091 SING N N 36 A1D5Y C10 H101 SING N N 37 A1D5Y C11 H111 SING N N 38 A1D5Y C12 H121 SING N N 39 A1D5Y C13 H131 SING N N 40 A1D5Y C14 H141 SING N N 41 A1D5Y C15 H151 SING N N 42 A1D5Y C15 H152 SING N N 43 A1D5Y C16 H161 SING N N 44 A1D5Y C16 H162 SING N N 45 A1D5Y C17 H171 SING N N 46 A1D5Y C17 H172 SING N N 47 A1D5Y C23 H231 SING N N 48 A1D5Y O02 H021 SING N N 49 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1D5Y InChI InChI 1.06 "InChI=1S/C19H24N2OS/c1-14(22)15-9-10-19-17(13-15)21(12-6-11-20(2)3)16-7-4-5-8-18(16)23-19/h4-5,7-10,13-14,22H,6,11-12H2,1-3H3/t14-/m0/s1" A1D5Y InChIKey InChI 1.06 ZIJWCRNUEBJMSQ-AWEZNQCLSA-N A1D5Y SMILES_CANONICAL CACTVS 3.385 "C[C@H](O)c1ccc2Sc3ccccc3N(CCCN(C)C)c2c1" A1D5Y SMILES CACTVS 3.385 "C[CH](O)c1ccc2Sc3ccccc3N(CCCN(C)C)c2c1" A1D5Y SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@@H](c1ccc2c(c1)N(c3ccccc3S2)CCCN(C)C)O" A1D5Y SMILES "OpenEye OEToolkits" 2.0.7 "CC(c1ccc2c(c1)N(c3ccccc3S2)CCCN(C)C)O" # _pdbx_chem_comp_identifier.comp_id A1D5Y _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(1~{S})-1-[10-[3-(dimethylamino)propyl]phenothiazin-2-yl]ethanol" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1D5Y "Create component" 2024-02-04 PDBC A1D5Y "Initial release" 2024-10-09 RCSB #