data_A1D6F # _chem_comp.id A1D6F _chem_comp.name "4-[(~{S})-[(2~{R},5~{S})-2,5-dimethyl-4-prop-2-enyl-piperazin-1-yl]-(3-methoxyphenyl)methyl]-~{N},~{N}-diethyl-benzamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C28 H39 N3 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-02-29 _chem_comp.pdbx_modified_date 2026-01-02 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 449.628 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1D6F _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8Y71 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBC _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1D6F C10 C1 C 0 1 Y N N N N N 123.388 116.752 88.858 -1.576 0.702 -1.226 C10 A1D6F 1 A1D6F C13 C2 C 0 1 Y N N N N N 123.694 113.977 89.048 -2.332 -0.101 1.319 C13 A1D6F 2 A1D6F C17 C3 C 0 1 N N S N N N 125.197 116.938 93.420 1.772 -3.056 -0.104 C17 A1D6F 3 A1D6F C20 C4 C 0 1 N N N N N N 125.120 118.010 95.579 3.942 -4.105 0.135 C20 A1D6F 4 A1D6F C21 C5 C 0 1 N N N N N N 125.296 119.533 95.522 5.366 -4.058 -0.357 C21 A1D6F 5 A1D6F C22 C6 C 0 1 N N N N N N 125.803 120.101 94.385 6.356 -4.124 0.498 C22 A1D6F 6 A1D6F C24 C7 C 0 1 N N R N N N 122.359 116.920 93.613 3.014 -0.489 -0.368 C24 A1D6F 7 A1D6F C26 C8 C 0 1 Y N N N N N 120.799 116.833 91.198 1.398 1.803 0.039 C26 A1D6F 8 A1D6F C28 C9 C 0 1 Y N N N N N 118.606 117.834 90.805 2.183 4.061 -0.134 C28 A1D6F 9 A1D6F C01 C10 C 0 1 N N N N N N 124.806 111.216 84.912 -7.098 -2.152 1.019 C01 A1D6F 10 A1D6F C02 C11 C 0 1 N N N N N N 124.316 112.603 84.413 -6.965 -0.845 0.235 C02 A1D6F 11 A1D6F N03 N1 N 0 1 N N N N N N 123.761 113.417 85.492 -5.563 -0.640 -0.138 N03 A1D6F 12 A1D6F C04 C12 C 0 1 N N N N N N 122.347 113.842 85.518 -5.058 -1.167 -1.408 C04 A1D6F 13 A1D6F C05 C13 C 0 1 N N N N N N 121.622 112.713 86.067 -5.428 -0.209 -2.542 C05 A1D6F 14 A1D6F C06 C14 C 0 1 N N N N N N 124.639 113.820 86.642 -4.738 0.035 0.688 C06 A1D6F 15 A1D6F O07 O1 O 0 1 N N N N N N 125.785 113.502 86.690 -5.174 0.535 1.707 O07 A1D6F 16 A1D6F C08 C15 C 0 1 Y N N N N N 124.075 114.656 87.849 -3.304 0.166 0.354 C08 A1D6F 17 A1D6F C09 C16 C 0 1 Y N N N N N 123.916 116.035 87.766 -2.916 0.576 -0.923 C09 A1D6F 18 A1D6F C11 C17 C 0 1 Y N N N N N 123.005 116.084 90.059 -0.618 0.425 -0.268 C11 A1D6F 19 A1D6F C12 C18 C 0 1 Y N N N N N 123.172 114.691 90.139 -0.996 0.024 1.002 C12 A1D6F 20 A1D6F C14 C19 C 0 1 N N S N N N 122.422 116.962 91.259 0.844 0.559 -0.608 C14 A1D6F 21 A1D6F N15 N2 N 0 1 N N N N N N 123.080 116.711 92.441 1.572 -0.616 -0.112 N15 A1D6F 22 A1D6F C16 C20 C 0 1 N N N N N N 124.227 117.520 92.380 1.042 -1.852 -0.704 C16 A1D6F 23 A1D6F C18 C21 C 0 1 N N N N N N 125.445 115.433 92.846 1.524 -3.104 1.405 C18 A1D6F 24 A1D6F N19 N3 N 0 1 N N N N N N 124.545 117.264 94.607 3.214 -2.929 -0.360 N19 A1D6F 25 A1D6F C23 C22 C 0 1 N N N N N N 123.294 116.679 94.831 3.744 -1.693 0.232 C23 A1D6F 26 A1D6F C25 C23 C 0 1 N N N N N N 121.672 118.356 93.889 3.262 -0.442 -1.877 C25 A1D6F 27 A1D6F C27 C24 C 0 1 Y N N N N N 119.997 117.951 90.863 1.673 2.917 -0.730 C27 A1D6F 28 A1D6F O29 O2 O 0 1 N N N N N N 117.810 118.973 90.490 2.454 5.158 -0.888 O29 A1D6F 29 A1D6F C30 C25 C 0 1 N N N N N N 116.874 118.935 89.399 2.977 6.301 -0.207 C30 A1D6F 30 A1D6F C31 C26 C 0 1 Y N N N N N 118.017 116.623 91.091 2.415 4.083 1.234 C31 A1D6F 31 A1D6F C32 C27 C 0 1 Y N N N N N 118.788 115.520 91.412 2.133 2.969 1.999 C32 A1D6F 32 A1D6F C33 C28 C 0 1 Y N N N N N 120.180 115.647 91.451 1.625 1.829 1.403 C33 A1D6F 33 A1D6F H101 H1 H 0 0 N N N N N N 123.271 117.823 88.785 -1.275 1.014 -2.215 H101 A1D6F 34 A1D6F H131 H2 H 0 0 N N N N N N 123.809 112.905 89.115 -2.626 -0.414 2.311 H131 A1D6F 35 A1D6F H171 H3 H 0 0 N N N N N N 126.152 117.479 93.346 1.401 -3.973 -0.563 H171 A1D6F 36 A1D6F H202 H4 H 0 0 N N N N N N 124.531 117.815 96.487 3.461 -5.012 -0.232 H202 A1D6F 37 A1D6F H201 H5 H 0 0 N N N N N N 126.133 117.601 95.704 3.934 -4.105 1.225 H201 A1D6F 38 A1D6F H211 H6 H 0 0 N N N N N N 125.024 120.148 96.367 5.569 -3.970 -1.414 H211 A1D6F 39 A1D6F H222 H7 H 0 0 N N N N N N 125.933 121.172 94.328 6.153 -4.211 1.555 H222 A1D6F 40 A1D6F H221 H8 H 0 0 N N N N N N 126.073 119.479 93.545 7.377 -4.090 0.146 H221 A1D6F 41 A1D6F H241 H9 H 0 0 N N N N N N 121.552 116.175 93.675 3.386 0.427 0.090 H241 A1D6F 42 A1D6F H013 H10 H 0 0 N N N N N N 125.213 110.644 84.065 -6.761 -2.983 0.400 H013 A1D6F 43 A1D6F H012 H11 H 0 0 N N N N N N 125.590 111.355 85.671 -6.487 -2.099 1.920 H012 A1D6F 44 A1D6F H011 H12 H 0 0 N N N N N N 123.962 110.666 85.354 -8.141 -2.304 1.296 H011 A1D6F 45 A1D6F H022 H13 H 0 0 N N N N N N 125.167 113.139 83.967 -7.576 -0.898 -0.666 H022 A1D6F 46 A1D6F H021 H14 H 0 0 N N N N N N 123.539 112.450 83.650 -7.302 -0.013 0.854 H021 A1D6F 47 A1D6F H042 H15 H 0 0 N N N N N N 122.222 114.729 86.157 -3.973 -1.265 -1.355 H042 A1D6F 48 A1D6F H041 H16 H 0 0 N N N N N N 121.994 114.070 84.502 -5.502 -2.144 -1.597 H041 A1D6F 49 A1D6F H053 H17 H 0 0 N N N N N N 120.550 112.955 86.119 -4.878 -0.482 -3.442 H053 A1D6F 50 A1D6F H051 H18 H 0 0 N N N N N N 121.769 111.834 85.422 -6.499 -0.274 -2.736 H051 A1D6F 51 A1D6F H052 H19 H 0 0 N N N N N N 121.997 112.493 87.077 -5.172 0.810 -2.254 H052 A1D6F 52 A1D6F H091 H20 H 0 0 N N N N N N 124.198 116.557 86.863 -3.663 0.793 -1.672 H091 A1D6F 53 A1D6F H121 H21 H 0 0 N N N N N N 122.898 114.167 91.043 -0.243 -0.183 1.748 H121 A1D6F 54 A1D6F H141 H22 H 0 0 N N N N N N 122.631 118.005 90.978 0.961 0.630 -1.689 H141 A1D6F 55 A1D6F H162 H24 H 0 0 N N N N N N 124.672 117.480 91.375 1.196 -1.834 -1.783 H162 A1D6F 56 A1D6F H161 H25 H 0 0 N N N N N N 123.976 118.562 92.629 -0.024 -1.930 -0.490 H161 A1D6F 57 A1D6F H181 H26 H 0 0 N N N N N N 126.137 114.896 93.512 1.895 -2.188 1.863 H181 A1D6F 58 A1D6F H183 H27 H 0 0 N N N N N N 124.487 114.895 92.802 0.455 -3.198 1.594 H183 A1D6F 59 A1D6F H182 H28 H 0 0 N N N N N N 125.879 115.492 91.837 2.046 -3.961 1.832 H182 A1D6F 60 A1D6F H232 H30 H 0 0 N N N N N N 122.841 117.124 95.729 4.810 -1.616 0.018 H232 A1D6F 61 A1D6F H231 H31 H 0 0 N N N N N N 123.421 115.597 94.982 3.589 -1.712 1.311 H231 A1D6F 62 A1D6F H251 H32 H 0 0 N N N N N N 121.150 118.333 94.857 2.944 -1.382 -2.328 H251 A1D6F 63 A1D6F H253 H33 H 0 0 N N N N N N 122.448 119.136 93.910 2.695 0.380 -2.313 H253 A1D6F 64 A1D6F H252 H34 H 0 0 N N N N N N 120.951 118.577 93.088 4.325 -0.290 -2.066 H252 A1D6F 65 A1D6F H271 H35 H 0 0 N N N N N N 120.464 118.901 90.651 1.492 2.897 -1.794 H271 A1D6F 66 A1D6F H301 H36 H 0 0 N N N N N N 116.362 119.905 89.321 2.264 6.633 0.547 H301 A1D6F 67 A1D6F H302 H37 H 0 0 N N N N N N 117.412 118.727 88.462 3.919 6.037 0.275 H302 A1D6F 68 A1D6F H303 H38 H 0 0 N N N N N N 116.133 118.143 89.580 3.149 7.104 -0.924 H303 A1D6F 69 A1D6F H311 H39 H 0 0 N N N N N N 116.941 116.533 91.064 2.812 4.973 1.700 H311 A1D6F 70 A1D6F H321 H40 H 0 0 N N N N N N 118.320 114.571 91.630 2.313 2.986 3.064 H321 A1D6F 71 A1D6F H331 H41 H 0 0 N N N N N N 120.780 114.781 91.688 1.404 0.959 2.003 H331 A1D6F 72 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1D6F C02 C01 SING N N 1 A1D6F C02 N03 SING N N 2 A1D6F N03 C04 SING N N 3 A1D6F N03 C06 SING N N 4 A1D6F C04 C05 SING N N 5 A1D6F C06 O07 DOUB N N 6 A1D6F C06 C08 SING N N 7 A1D6F C09 C08 DOUB Y N 8 A1D6F C09 C10 SING Y N 9 A1D6F C08 C13 SING Y N 10 A1D6F C10 C11 DOUB Y N 11 A1D6F C13 C12 DOUB Y N 12 A1D6F C30 O29 SING N N 13 A1D6F C11 C12 SING Y N 14 A1D6F C11 C14 SING N N 15 A1D6F O29 C28 SING N N 16 A1D6F C28 C27 DOUB Y N 17 A1D6F C28 C31 SING Y N 18 A1D6F C27 C26 SING Y N 19 A1D6F C31 C32 DOUB Y N 20 A1D6F C26 C14 SING N N 21 A1D6F C26 C33 DOUB Y N 22 A1D6F C14 N15 SING N N 23 A1D6F C32 C33 SING Y N 24 A1D6F C16 N15 SING N N 25 A1D6F C16 C17 SING N N 26 A1D6F N15 C24 SING N N 27 A1D6F C18 C17 SING N N 28 A1D6F C17 N19 SING N N 29 A1D6F C24 C25 SING N N 30 A1D6F C24 C23 SING N N 31 A1D6F C22 C21 DOUB N N 32 A1D6F N19 C23 SING N N 33 A1D6F N19 C20 SING N N 34 A1D6F C21 C20 SING N N 35 A1D6F C10 H101 SING N N 36 A1D6F C13 H131 SING N N 37 A1D6F C17 H171 SING N N 38 A1D6F C20 H202 SING N N 39 A1D6F C20 H201 SING N N 40 A1D6F C21 H211 SING N N 41 A1D6F C22 H222 SING N N 42 A1D6F C22 H221 SING N N 43 A1D6F C24 H241 SING N N 44 A1D6F C01 H013 SING N N 45 A1D6F C01 H012 SING N N 46 A1D6F C01 H011 SING N N 47 A1D6F C02 H022 SING N N 48 A1D6F C02 H021 SING N N 49 A1D6F C04 H042 SING N N 50 A1D6F C04 H041 SING N N 51 A1D6F C05 H053 SING N N 52 A1D6F C05 H051 SING N N 53 A1D6F C05 H052 SING N N 54 A1D6F C09 H091 SING N N 55 A1D6F C12 H121 SING N N 56 A1D6F C14 H141 SING N N 57 A1D6F C16 H162 SING N N 58 A1D6F C16 H161 SING N N 59 A1D6F C18 H181 SING N N 60 A1D6F C18 H183 SING N N 61 A1D6F C18 H182 SING N N 62 A1D6F C23 H232 SING N N 63 A1D6F C23 H231 SING N N 64 A1D6F C25 H251 SING N N 65 A1D6F C25 H253 SING N N 66 A1D6F C25 H252 SING N N 67 A1D6F C27 H271 SING N N 68 A1D6F C30 H301 SING N N 69 A1D6F C30 H302 SING N N 70 A1D6F C30 H303 SING N N 71 A1D6F C31 H311 SING N N 72 A1D6F C32 H321 SING N N 73 A1D6F C33 H331 SING N N 74 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1D6F InChI InChI 1.06 "InChI=1S/C28H39N3O2/c1-7-17-30-19-22(5)31(20-21(30)4)27(25-11-10-12-26(18-25)33-6)23-13-15-24(16-14-23)28(32)29(8-2)9-3/h7,10-16,18,21-22,27H,1,8-9,17,19-20H2,2-6H3/t21-,22+,27-/m0/s1" A1D6F InChIKey InChI 1.06 KQWVAUSXZDRQPZ-XXAUWVGASA-N A1D6F SMILES_CANONICAL CACTVS 3.385 "CCN(CC)C(=O)c1ccc(cc1)[C@H](N2C[C@H](C)N(CC=C)C[C@H]2C)c3cccc(OC)c3" A1D6F SMILES CACTVS 3.385 "CCN(CC)C(=O)c1ccc(cc1)[CH](N2C[CH](C)N(CC=C)C[CH]2C)c3cccc(OC)c3" A1D6F SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCN(CC)C(=O)c1ccc(cc1)[C@@H](c2cccc(c2)OC)N3C[C@@H](N(C[C@H]3C)CC=C)C" A1D6F SMILES "OpenEye OEToolkits" 2.0.7 "CCN(CC)C(=O)c1ccc(cc1)C(c2cccc(c2)OC)N3CC(N(CC3C)CC=C)C" # _pdbx_chem_comp_identifier.comp_id A1D6F _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "4-[(~{S})-[(2~{R},5~{S})-2,5-dimethyl-4-prop-2-enyl-piperazin-1-yl]-(3-methoxyphenyl)methyl]-~{N},~{N}-diethyl-benzamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1D6F "Create component" 2024-02-29 PDBC A1D6F "Initial release" 2026-01-07 RCSB #