data_A1D7B # _chem_comp.id A1D7B _chem_comp.name "~{S}-(2-acetamidoethyl) (6~{S})-6-chloranyldecanethioate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C14 H26 Cl N O2 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-03-29 _chem_comp.pdbx_modified_date 2025-02-21 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 307.880 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1D7B _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8YT0 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBC _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1D7B C10 C1 C 0 1 N N N N N N -6.614 -14.064 13.638 -3.276 0.567 0.081 C10 A1D7B 1 A1D7B C13 C2 C 0 1 N N N N N N -4.039 -14.621 16.368 -7.096 0.353 -0.333 C13 A1D7B 2 A1D7B C01 C3 C 0 1 N N N N N N -12.924 -11.102 12.398 8.034 0.393 0.144 C01 A1D7B 3 A1D7B C03 C4 C 0 1 N N N N N N -12.962 -12.790 10.697 5.725 -0.309 -0.191 C03 A1D7B 4 A1D7B C04 C5 C 0 1 N N N N N N -11.490 -12.940 10.333 4.320 0.252 0.036 C04 A1D7B 5 A1D7B C06 C6 C 0 1 N N N N N N -9.219 -14.634 11.097 1.651 -0.105 -0.152 C06 A1D7B 6 A1D7B C07 C7 C 0 1 N N N N N N -8.591 -15.738 11.926 0.311 -0.731 -0.441 C07 A1D7B 7 A1D7B C08 C8 C 0 1 N N N N N N -8.718 -15.354 13.387 -0.802 0.236 -0.033 C08 A1D7B 8 A1D7B C09 C9 C 0 1 N N N N N N -8.126 -13.972 13.580 -2.162 -0.400 -0.327 C09 A1D7B 9 A1D7B C11 C10 C 0 1 N N S N N N -6.193 -14.349 15.072 -4.636 -0.069 -0.213 C11 A1D7B 10 A1D7B C12 C11 C 0 1 N N N N N N -4.752 -13.900 15.237 -5.746 0.944 0.078 C12 A1D7B 11 A1D7B C14 C12 C 0 1 N N N N N N -2.561 -14.853 16.060 -8.205 1.366 -0.042 C14 A1D7B 12 A1D7B C18 C13 C 0 1 N N N N N N -12.862 -10.696 13.858 9.057 1.403 0.596 C18 A1D7B 13 A1D7B C19 C14 C 0 1 N N N N N N -2.234 -14.714 14.570 -9.556 0.775 -0.453 C19 A1D7B 14 A1D7B N02 N1 N 0 1 N N N N N N -12.923 -12.503 12.099 6.720 0.672 0.249 N02 A1D7B 15 A1D7B O15 O1 O 0 1 N N N N N N -12.985 -10.315 11.503 8.393 -0.670 -0.316 O15 A1D7B 16 A1D7B O16 O2 O 0 1 N N N N N N -8.592 -13.997 10.308 1.710 1.006 0.333 O16 A1D7B 17 A1D7B S05 S1 S 0 1 N N N N N N -10.973 -14.317 11.387 3.091 -0.961 -0.507 S05 A1D7B 18 A1D7B CL17 CL1 CL 0 0 N N N N N N -6.364 -16.101 15.411 -4.859 -1.521 0.832 CL17 A1D7B 19 A1D7B H1 H1 H 0 1 N N N N N N -6.268 -14.877 12.983 -3.198 0.782 1.147 H1 A1D7B 20 A1D7B H2 H2 H 0 1 N N N N N N -6.173 -13.113 13.306 -3.178 1.493 -0.485 H2 A1D7B 21 A1D7B H3 H3 H 0 1 N N N N N N -4.120 -14.014 17.282 -7.083 0.124 -1.398 H3 A1D7B 22 A1D7B H4 H4 H 0 1 N N N N N N -4.525 -15.595 16.530 -7.280 -0.560 0.233 H4 A1D7B 23 A1D7B H5 H5 H 0 1 N N N N N N -13.425 -11.964 10.138 5.845 -1.230 0.380 H5 A1D7B 24 A1D7B H6 H6 H 0 1 N N N N N N -13.514 -13.721 10.500 5.865 -0.519 -1.251 H6 A1D7B 25 A1D7B H7 H7 H 0 1 N N N N N N -11.366 -13.185 9.268 4.179 0.461 1.097 H7 A1D7B 26 A1D7B H8 H8 H 0 1 N N N N N N -10.926 -12.025 10.567 4.199 1.172 -0.535 H8 A1D7B 27 A1D7B H9 H9 H 0 1 N N N N N N -9.115 -16.687 11.742 0.233 -0.946 -1.507 H9 A1D7B 28 A1D7B H10 H10 H 0 1 N N N N N N -7.529 -15.848 11.659 0.213 -1.658 0.125 H10 A1D7B 29 A1D7B H11 H11 H 0 1 N N N N N N -9.779 -15.346 13.677 -0.724 0.451 1.033 H11 A1D7B 30 A1D7B H12 H12 H 0 1 N N N N N N -8.174 -16.080 14.009 -0.704 1.162 -0.599 H12 A1D7B 31 A1D7B H13 H13 H 0 1 N N N N N N -8.421 -13.328 12.738 -2.260 -1.326 0.239 H13 A1D7B 32 A1D7B H14 H14 H 0 1 N N N N N N -8.502 -13.542 14.520 -2.240 -0.615 -1.392 H14 A1D7B 33 A1D7B H15 H15 H 0 1 N N N N N N -6.846 -13.815 15.778 -4.680 -0.365 -1.261 H15 A1D7B 34 A1D7B H16 H16 H 0 1 N N N N N N -4.212 -14.097 14.299 -5.562 1.857 -0.488 H16 A1D7B 35 A1D7B H17 H17 H 0 1 N N N N N N -4.742 -12.820 15.446 -5.759 1.173 1.144 H17 A1D7B 36 A1D7B H18 H18 H 0 1 N N N N N N -1.966 -14.117 16.620 -8.218 1.595 1.024 H18 A1D7B 37 A1D7B H19 H19 H 0 1 N N N N N N -2.290 -15.868 16.386 -8.021 2.279 -0.608 H19 A1D7B 38 A1D7B H20 H20 H 0 1 N N N N N N -12.883 -9.599 13.935 8.550 2.289 0.976 H20 A1D7B 39 A1D7B H21 H21 H 0 1 N N N N N N -13.726 -11.117 14.393 9.671 0.969 1.385 H21 A1D7B 40 A1D7B H22 H22 H 0 1 N N N N N N -11.932 -11.078 14.305 9.691 1.680 -0.246 H22 A1D7B 41 A1D7B H23 H23 H 0 1 N N N N N N -1.160 -14.891 14.412 -9.543 0.546 -1.518 H23 A1D7B 42 A1D7B H24 H24 H 0 1 N N N N N N -2.816 -15.451 13.997 -9.740 -0.139 0.113 H24 A1D7B 43 A1D7B H25 H25 H 0 1 N N N N N N -2.492 -13.700 14.231 -10.346 1.496 -0.246 H25 A1D7B 44 A1D7B H26 H26 H 0 1 N N N N N N -12.897 -13.213 12.803 6.432 1.523 0.616 H26 A1D7B 45 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1D7B C01 C18 SING N N 1 A1D7B C01 N02 SING N N 2 A1D7B C01 O15 DOUB N N 3 A1D7B C03 C04 SING N N 4 A1D7B C03 N02 SING N N 5 A1D7B C04 S05 SING N N 6 A1D7B C06 C07 SING N N 7 A1D7B C06 O16 DOUB N N 8 A1D7B C06 S05 SING N N 9 A1D7B C07 C08 SING N N 10 A1D7B C08 C09 SING N N 11 A1D7B C09 C10 SING N N 12 A1D7B C10 C11 SING N N 13 A1D7B C11 C12 SING N N 14 A1D7B C11 CL17 SING N N 15 A1D7B C12 C13 SING N N 16 A1D7B C13 C14 SING N N 17 A1D7B C14 C19 SING N N 18 A1D7B C10 H1 SING N N 19 A1D7B C10 H2 SING N N 20 A1D7B C13 H3 SING N N 21 A1D7B C13 H4 SING N N 22 A1D7B C03 H5 SING N N 23 A1D7B C03 H6 SING N N 24 A1D7B C04 H7 SING N N 25 A1D7B C04 H8 SING N N 26 A1D7B C07 H9 SING N N 27 A1D7B C07 H10 SING N N 28 A1D7B C08 H11 SING N N 29 A1D7B C08 H12 SING N N 30 A1D7B C09 H13 SING N N 31 A1D7B C09 H14 SING N N 32 A1D7B C11 H15 SING N N 33 A1D7B C12 H16 SING N N 34 A1D7B C12 H17 SING N N 35 A1D7B C14 H18 SING N N 36 A1D7B C14 H19 SING N N 37 A1D7B C18 H20 SING N N 38 A1D7B C18 H21 SING N N 39 A1D7B C18 H22 SING N N 40 A1D7B C19 H23 SING N N 41 A1D7B C19 H24 SING N N 42 A1D7B C19 H25 SING N N 43 A1D7B N02 H26 SING N N 44 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1D7B InChI InChI 1.06 "InChI=1S/C14H26ClNO2S/c1-3-4-7-13(15)8-5-6-9-14(18)19-11-10-16-12(2)17/h13H,3-11H2,1-2H3,(H,16,17)/t13-/m0/s1" A1D7B InChIKey InChI 1.06 RVXSYHFIMKPVIW-ZDUSSCGKSA-N A1D7B SMILES_CANONICAL CACTVS 3.385 "CCCC[C@H](Cl)CCCCC(=O)SCCNC(C)=O" A1D7B SMILES CACTVS 3.385 "CCCC[CH](Cl)CCCCC(=O)SCCNC(C)=O" A1D7B SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCCC[C@@H](CCCCC(=O)SCCNC(=O)C)Cl" A1D7B SMILES "OpenEye OEToolkits" 2.0.7 "CCCCC(CCCCC(=O)SCCNC(=O)C)Cl" # _pdbx_chem_comp_identifier.comp_id A1D7B _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{S}-(2-acetamidoethyl) (6~{S})-6-chloranyldecanethioate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1D7B "Create component" 2024-03-29 PDBC A1D7B "Initial release" 2025-02-26 RCSB #