data_A1D81 # _chem_comp.id A1D81 _chem_comp.name "6-[[6-chloranyl-2-(3-methylbutyl)indazol-5-yl]amino]-3-[(1-methyl-1,2,4-triazol-3-yl)methyl]-1-[[2,4,5-tris(fluoranyl)phenyl]methyl]pyrimidine-2,4-dione" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C27 H26 Cl F3 N8 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-06-11 _chem_comp.pdbx_modified_date 2025-06-06 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 586.996 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1D81 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8ZUC _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBC _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1D81 N1 N1 N 0 1 N N N N N N 8.386 9.257 -3.473 0.212 0.299 -1.962 N1 A1D81 1 A1D81 N3 N2 N 0 1 N N N N N N 10.532 8.144 -0.072 -2.300 -2.451 -0.236 N3 A1D81 2 A1D81 C4 C1 C 0 1 Y N N N N N 8.178 7.233 -4.837 2.336 1.456 -2.003 C4 A1D81 3 A1D81 C5 C2 C 0 1 Y N N N N N 8.534 8.581 -4.694 1.530 0.420 -1.505 C5 A1D81 4 A1D81 C6 C3 C 0 1 Y N N N N N 9.139 9.298 -5.705 2.000 -0.470 -0.587 C6 A1D81 5 A1D81 C7 C4 C 0 1 N N N N N N 9.120 8.899 -2.343 -0.628 -0.626 -1.396 C7 A1D81 6 A1D81 C8 C5 C 0 1 N N N N N N 9.552 9.114 0.035 -1.790 -1.440 0.490 C8 A1D81 7 A1D81 C10 C6 C 0 1 N N N N N N 10.120 7.923 -2.425 -1.129 -1.654 -2.146 C10 A1D81 8 A1D81 C13 C7 C 0 1 Y N N N N N 5.439 10.709 -0.212 -1.552 2.570 -0.226 C13 A1D81 9 A1D81 C15 C8 C 0 1 Y N N N N N 4.057 8.857 0.212 -3.283 3.729 0.960 C15 A1D81 10 A1D81 C17 C9 C 0 1 Y N N N N N 6.312 8.524 -0.527 -2.237 1.805 1.939 C17 A1D81 11 A1D81 C20 C10 C 0 1 Y N N N N N 13.852 9.177 2.919 -6.607 -2.662 -0.522 C20 A1D81 12 A1D81 C21 C11 C 0 1 N N N N N N 14.627 11.160 1.563 -7.607 -1.195 1.256 C21 A1D81 13 A1D81 C22 C12 C 0 1 Y N N N N N 9.905 9.017 -8.160 4.109 -1.056 0.776 C22 A1D81 14 A1D81 C24 C13 C 0 1 N N N N N N 11.836 7.654 -10.319 7.662 -1.166 0.763 C24 A1D81 15 A1D81 C26 C14 C 0 1 N N N N N N 12.312 7.101 -12.729 10.019 -1.996 0.738 C26 A1D81 16 A1D81 C1 C15 C 0 1 Y N N N N N 9.363 8.657 -6.929 3.327 -0.353 -0.122 C1 A1D81 17 A1D81 C2 C16 C 0 1 Y N N N N N 8.981 7.298 -7.095 4.170 0.733 -0.646 C2 A1D81 18 A1D81 C3 C17 C 0 1 Y N N N N N 8.385 6.585 -6.035 3.620 1.617 -1.600 C3 A1D81 19 A1D81 CL1 CL1 CL 0 0 N N N N N N 7.455 6.334 -3.528 1.672 2.555 -3.172 CL1 A1D81 20 A1D81 N2 N3 N 0 1 N N N N N N 8.888 9.507 -1.121 -0.966 -0.534 -0.067 N2 A1D81 21 A1D81 C9 C18 C 0 1 N N N N N N 10.867 7.523 -1.279 -1.991 -2.582 -1.541 C9 A1D81 22 A1D81 O1 O1 O 0 1 N N N N N N 11.734 6.652 -1.250 -2.449 -3.507 -2.190 O1 A1D81 23 A1D81 O2 O2 O 0 1 N N N N N N 9.333 9.659 1.101 -2.079 -1.344 1.667 O2 A1D81 24 A1D81 C11 C19 C 0 1 N N N N N N 7.831 10.523 -0.943 -0.425 0.557 0.748 C11 A1D81 25 A1D81 C12 C20 C 0 1 Y N N N N N 6.514 9.900 -0.541 -1.433 1.675 0.824 C12 A1D81 26 A1D81 C14 C21 C 0 1 Y N N N N N 4.209 10.217 0.190 -2.477 3.598 -0.157 C14 A1D81 27 A1D81 C16 C22 C 0 1 Y N N N N N 5.090 8.020 -0.139 -3.163 2.832 2.010 C16 A1D81 28 A1D81 F1 F1 F 0 1 N N N N N N 4.884 6.687 -0.065 -3.949 2.960 3.101 F1 A1D81 29 A1D81 F2 F2 F 0 1 N N N N N N 2.879 8.300 0.552 -4.187 4.731 1.027 F2 A1D81 30 A1D81 F3 F3 F 0 1 N N N N N N 5.603 12.061 -0.266 -0.761 2.445 -1.314 F3 A1D81 31 A1D81 C18 C23 C 0 1 N N N N N N 11.215 7.663 1.159 -3.195 -3.422 0.399 C18 A1D81 32 A1D81 C19 C24 C 0 1 Y N N N N N 12.332 8.514 1.641 -4.620 -2.947 0.277 C19 A1D81 33 A1D81 N4 N4 N 0 1 Y N N N N N 12.938 8.241 2.810 -5.447 -3.232 -0.728 N4 A1D81 34 A1D81 N5 N5 N 0 1 Y N N N N N 13.800 9.986 1.860 -6.540 -1.985 0.637 N5 A1D81 35 A1D81 N6 N6 N 0 1 Y N N N N N 12.825 9.565 1.023 -5.243 -2.187 1.138 N6 A1D81 36 A1D81 N7 N7 N 0 1 Y N N N N N 9.827 7.944 -8.937 5.317 -0.475 0.814 N7 A1D81 37 A1D81 N8 N8 N 0 1 Y N N N N N 9.288 6.850 -8.334 5.348 0.619 -0.058 N8 A1D81 38 A1D81 C23 C25 C 0 1 N N N N N N 10.324 7.816 -10.306 6.438 -0.919 1.646 C23 A1D81 39 A1D81 C25 C26 C 0 1 N N N N N N 12.343 6.606 -11.296 8.833 -1.630 1.633 C25 A1D81 40 A1D81 C27 C27 C 0 1 N N N N N N 13.758 6.173 -10.936 9.240 -0.502 2.583 C27 A1D81 41 A1D81 H1 H1 H 0 1 N N N N N N 7.737 10.015 -3.412 -0.108 0.872 -2.677 H1 A1D81 42 A1D81 H2 H2 H 0 1 N N N N N N 9.432 10.327 -5.556 1.361 -1.258 -0.218 H2 A1D81 43 A1D81 H3 H3 H 0 1 N N N N N N 10.330 7.462 -3.379 -0.868 -1.748 -3.190 H3 A1D81 44 A1D81 H4 H4 H 0 1 N N N N N N 7.108 7.855 -0.818 -2.144 1.106 2.757 H4 A1D81 45 A1D81 H5 H5 H 0 1 N N N N N N 14.543 9.277 3.743 -7.467 -2.722 -1.173 H5 A1D81 46 A1D81 H6 H6 H 0 1 N N N N N N 14.318 11.593 0.600 -8.196 -1.833 1.915 H6 A1D81 47 A1D81 H7 H7 H 0 1 N N N N N N 14.500 11.909 2.359 -7.169 -0.382 1.834 H7 A1D81 48 A1D81 H8 H8 H 0 1 N N N N N N 15.684 10.859 1.508 -8.251 -0.783 0.479 H8 A1D81 49 A1D81 H9 H9 H 0 1 N N N N N N 10.310 9.981 -8.430 3.801 -1.920 1.346 H9 A1D81 50 A1D81 H10 H10 H 0 1 N N N N N N 12.161 7.368 -9.308 7.430 -1.935 0.027 H10 A1D81 51 A1D81 H11 H11 H 0 1 N N N N N N 12.284 8.622 -10.588 7.933 -0.243 0.251 H11 A1D81 52 A1D81 H12 H12 H 0 1 N N N N N N 11.289 7.413 -12.988 10.852 -2.327 1.357 H12 A1D81 53 A1D81 H13 H13 H 0 1 N N N N N N 12.995 7.957 -12.836 9.728 -2.800 0.061 H13 A1D81 54 A1D81 H14 H14 H 0 1 N N N N N N 12.630 6.292 -13.403 10.320 -1.124 0.158 H14 A1D81 55 A1D81 H15 H15 H 0 1 N N N N N N 8.097 5.552 -6.160 4.218 2.422 -2.001 H15 A1D81 56 A1D81 H16 H16 H 0 1 N N N N N N 8.144 11.229 -0.160 -0.214 0.189 1.753 H16 A1D81 57 A1D81 H17 H17 H 0 1 N N N N N N 7.694 11.064 -1.891 0.495 0.926 0.296 H17 A1D81 58 A1D81 H18 H18 H 0 1 N N N N N N 3.404 10.878 0.474 -2.570 4.296 -0.976 H18 A1D81 59 A1D81 H19 H19 H 0 1 N N N N N N 10.465 7.601 1.961 -3.091 -4.389 -0.094 H19 A1D81 60 A1D81 H20 H20 H 0 1 N N N N N N 11.617 6.660 0.954 -2.934 -3.522 1.453 H20 A1D81 61 A1D81 H21 H21 H 0 1 N N N N N N 10.053 8.718 -10.874 6.167 -1.842 2.159 H21 A1D81 62 A1D81 H22 H22 H 0 1 N N N N N N 9.863 6.935 -10.776 6.670 -0.150 2.383 H22 A1D81 63 A1D81 H23 H23 H 0 1 N N N N N N 11.688 5.725 -11.223 8.531 -2.502 2.212 H23 A1D81 64 A1D81 H24 H24 H 0 1 N N N N N N 13.779 5.814 -9.896 9.541 0.370 2.003 H24 A1D81 65 A1D81 H25 H25 H 0 1 N N N N N N 14.076 5.364 -11.610 8.395 -0.241 3.220 H25 A1D81 66 A1D81 H26 H26 H 0 1 N N N N N N 14.441 7.028 -11.042 10.074 -0.832 3.202 H26 A1D81 67 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1D81 C26 C25 SING N N 1 A1D81 C25 C27 SING N N 2 A1D81 C25 C24 SING N N 3 A1D81 C24 C23 SING N N 4 A1D81 C23 N7 SING N N 5 A1D81 N7 N8 SING Y N 6 A1D81 N7 C22 SING Y N 7 A1D81 N8 C2 DOUB Y N 8 A1D81 C22 C1 DOUB Y N 9 A1D81 C2 C1 SING Y N 10 A1D81 C2 C3 SING Y N 11 A1D81 C1 C6 SING Y N 12 A1D81 C3 C4 DOUB Y N 13 A1D81 C6 C5 DOUB Y N 14 A1D81 C4 C5 SING Y N 15 A1D81 C4 CL1 SING N N 16 A1D81 C5 N1 SING N N 17 A1D81 N1 C7 SING N N 18 A1D81 C10 C7 DOUB N N 19 A1D81 C10 C9 SING N N 20 A1D81 C7 N2 SING N N 21 A1D81 C9 O1 DOUB N N 22 A1D81 C9 N3 SING N N 23 A1D81 N2 C11 SING N N 24 A1D81 N2 C8 SING N N 25 A1D81 C11 C12 SING N N 26 A1D81 C12 C17 DOUB Y N 27 A1D81 C12 C13 SING Y N 28 A1D81 C17 C16 SING Y N 29 A1D81 F3 C13 SING N N 30 A1D81 C13 C14 DOUB Y N 31 A1D81 C16 F1 SING N N 32 A1D81 C16 C15 DOUB Y N 33 A1D81 N3 C8 SING N N 34 A1D81 N3 C18 SING N N 35 A1D81 C8 O2 DOUB N N 36 A1D81 C14 C15 SING Y N 37 A1D81 C15 F2 SING N N 38 A1D81 N6 C19 DOUB Y N 39 A1D81 N6 N5 SING Y N 40 A1D81 C18 C19 SING N N 41 A1D81 C21 N5 SING N N 42 A1D81 C19 N4 SING Y N 43 A1D81 N5 C20 SING Y N 44 A1D81 N4 C20 DOUB Y N 45 A1D81 N1 H1 SING N N 46 A1D81 C6 H2 SING N N 47 A1D81 C10 H3 SING N N 48 A1D81 C17 H4 SING N N 49 A1D81 C20 H5 SING N N 50 A1D81 C21 H6 SING N N 51 A1D81 C21 H7 SING N N 52 A1D81 C21 H8 SING N N 53 A1D81 C22 H9 SING N N 54 A1D81 C24 H10 SING N N 55 A1D81 C24 H11 SING N N 56 A1D81 C26 H12 SING N N 57 A1D81 C26 H13 SING N N 58 A1D81 C26 H14 SING N N 59 A1D81 C3 H15 SING N N 60 A1D81 C11 H16 SING N N 61 A1D81 C11 H17 SING N N 62 A1D81 C14 H18 SING N N 63 A1D81 C18 H19 SING N N 64 A1D81 C18 H20 SING N N 65 A1D81 C23 H21 SING N N 66 A1D81 C23 H22 SING N N 67 A1D81 C25 H23 SING N N 68 A1D81 C27 H24 SING N N 69 A1D81 C27 H25 SING N N 70 A1D81 C27 H26 SING N N 71 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1D81 InChI InChI 1.06 "InChI=1S/C27H26ClF3N8O2/c1-15(2)4-5-37-11-17-7-23(18(28)8-22(17)34-37)33-25-10-26(40)39(13-24-32-14-36(3)35-24)27(41)38(25)12-16-6-20(30)21(31)9-19(16)29/h6-11,14-15,33H,4-5,12-13H2,1-3H3" A1D81 InChIKey InChI 1.06 NRIKWWPBYFNOLT-UHFFFAOYSA-N A1D81 SMILES_CANONICAL CACTVS 3.385 "CC(C)CCn1cc2cc(NC3=CC(=O)N(Cc4ncn(C)n4)C(=O)N3Cc5cc(F)c(F)cc5F)c(Cl)cc2n1" A1D81 SMILES CACTVS 3.385 "CC(C)CCn1cc2cc(NC3=CC(=O)N(Cc4ncn(C)n4)C(=O)N3Cc5cc(F)c(F)cc5F)c(Cl)cc2n1" A1D81 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)CCn1cc2cc(c(cc2n1)Cl)NC3=CC(=O)N(C(=O)N3Cc4cc(c(cc4F)F)F)Cc5ncn(n5)C" A1D81 SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)CCn1cc2cc(c(cc2n1)Cl)NC3=CC(=O)N(C(=O)N3Cc4cc(c(cc4F)F)F)Cc5ncn(n5)C" # _pdbx_chem_comp_identifier.comp_id A1D81 _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "6-[[6-chloranyl-2-(3-methylbutyl)indazol-5-yl]amino]-3-[(1-methyl-1,2,4-triazol-3-yl)methyl]-1-[[2,4,5-tris(fluoranyl)phenyl]methyl]pyrimidine-2,4-dione" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1D81 "Create component" 2024-06-11 PDBC A1D81 "Initial release" 2025-06-11 RCSB #