data_A1D8F # _chem_comp.id A1D8F _chem_comp.name "methyl 4-[(1~{E})-7-methyl-3-methylidene-octa-1,6-dienyl]-3,5-bis(oxidanyl)benzoate" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C18 H22 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-05-22 _chem_comp.pdbx_modified_date 2025-10-06 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 302.365 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1D8F _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8ZLT _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBC _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1D8F C02 C1 C 0 1 N N N N N N 45.271 8.656 43.994 4.982 0.434 0.302 C02 A1D8F 1 A1D8F C04 C2 C 0 1 N N N N N N 44.663 9.514 46.030 7.036 -0.207 1.337 C04 A1D8F 2 A1D8F C05 C3 C 0 1 Y N N N N N 45.562 8.704 42.494 3.535 0.288 0.056 C05 A1D8F 3 A1D8F C06 C4 C 0 1 Y N N N N N 45.326 9.857 41.775 2.882 1.168 -0.813 C06 A1D8F 4 A1D8F C07 C5 C 0 1 Y N N N N N 45.571 9.897 40.409 1.528 1.034 -1.045 C07 A1D8F 5 A1D8F C08 C6 C 0 1 Y N N N N N 46.041 8.773 39.741 0.806 0.013 -0.408 C08 A1D8F 6 A1D8F C09 C7 C 0 1 N N N N N N 46.360 8.779 38.244 -0.635 -0.133 -0.654 C09 A1D8F 7 A1D8F C10 C8 C 0 1 N N N N N N 46.060 9.796 37.450 -1.144 -1.337 -0.985 C10 A1D8F 8 A1D8F C11 C9 C 0 1 N N N N N N 46.496 9.717 35.994 -2.581 -1.482 -1.230 C11 A1D8F 9 A1D8F C12 C10 C 0 1 N N N N N N 46.647 11.135 35.426 -3.490 -0.287 -1.111 C12 A1D8F 10 A1D8F C13 C11 C 0 1 N N N N N N 48.077 11.316 34.882 -3.907 -0.105 0.350 C13 A1D8F 11 A1D8F C14 C12 C 0 1 N N N N N N 48.348 12.762 34.445 -4.816 1.091 0.468 C14 A1D8F 12 A1D8F C15 C13 C 0 1 N N N N N N 49.357 13.019 33.322 -5.998 0.963 1.018 C15 A1D8F 13 A1D8F C16 C14 C 0 1 N N N N N N 49.682 14.474 32.937 -6.448 -0.380 1.533 C16 A1D8F 14 A1D8F C17 C15 C 0 1 N N N N N N 49.873 11.894 32.422 -6.907 2.158 1.137 C17 A1D8F 15 A1D8F C18 C16 C 0 1 N N N N N N 45.652 8.769 35.146 -3.084 -2.673 -1.557 C18 A1D8F 16 A1D8F C19 C17 C 0 1 Y N N N N N 46.299 7.621 40.467 1.464 -0.869 0.464 C19 A1D8F 17 A1D8F C20 C18 C 0 1 Y N N N N N 46.044 7.581 41.834 2.819 -0.733 0.688 C20 A1D8F 18 A1D8F O01 O1 O 0 1 N N N N N N 45.017 7.617 44.499 5.606 1.319 -0.251 O01 A1D8F 19 A1D8F O03 O2 O 0 1 N N N N N N 45.266 9.799 44.789 5.611 -0.410 1.143 O03 A1D8F 20 A1D8F O21 O3 O 0 1 N N N N N N 46.788 6.481 39.819 0.768 -1.859 1.082 O21 A1D8F 21 A1D8F O22 O4 O 0 1 N N N N N N 45.326 11.108 39.749 0.895 1.890 -1.889 O22 A1D8F 22 A1D8F H042 H1 H 0 0 N N N N N N 44.661 10.420 46.654 7.417 -0.951 2.036 H042 A1D8F 23 A1D8F H043 H2 H 0 0 N N N N N N 43.628 9.180 45.866 7.551 -0.308 0.382 H043 A1D8F 24 A1D8F H041 H3 H 0 0 N N N N N N 45.229 8.719 46.539 7.209 0.791 1.740 H041 A1D8F 25 A1D8F H061 H4 H 0 0 N N N N N N 44.948 10.735 42.278 3.439 1.954 -1.302 H061 A1D8F 26 A1D8F H091 H5 H 0 0 N N N N N N 46.851 7.917 37.817 -1.287 0.724 -0.569 H091 A1D8F 27 A1D8F H101 H6 H 0 0 N N N N N N 45.523 10.655 37.824 -0.492 -2.194 -1.070 H101 A1D8F 28 A1D8F H122 H7 H 0 0 N N N N N N 45.923 11.284 34.612 -2.965 0.605 -1.453 H122 A1D8F 29 A1D8F H121 H8 H 0 0 N N N N N N 46.461 11.871 36.222 -4.378 -0.443 -1.725 H121 A1D8F 30 A1D8F H131 H9 H 0 0 N N N N N N 48.794 11.043 35.670 -4.432 -0.997 0.691 H131 A1D8F 31 A1D8F H132 H10 H 0 0 N N N N N N 48.214 10.652 34.016 -3.020 0.051 0.964 H132 A1D8F 32 A1D8F H142 H11 H 0 0 N N N N N N 47.836 13.585 34.922 -4.493 2.053 0.100 H142 A1D8F 33 A1D8F H162 H12 H 0 0 N N N N N N 50.419 14.482 32.120 -5.760 -0.723 2.306 H162 A1D8F 34 A1D8F H161 H13 H 0 0 N N N N N N 48.763 14.980 32.606 -7.450 -0.291 1.953 H161 A1D8F 35 A1D8F H163 H14 H 0 0 N N N N N N 50.097 15.000 33.810 -6.461 -1.098 0.713 H163 A1D8F 36 A1D8F H172 H15 H 0 0 N N N N N N 50.584 12.306 31.691 -7.531 2.230 0.246 H172 A1D8F 37 A1D8F H173 H16 H 0 0 N N N N N N 50.378 11.135 33.037 -7.542 2.047 2.016 H173 A1D8F 38 A1D8F H171 H17 H 0 0 N N N N N N 49.027 11.432 31.891 -6.307 3.063 1.234 H171 A1D8F 39 A1D8F H182 H18 H 0 0 N N N N N N 45.214 9.116 34.222 -4.143 -2.780 -1.738 H182 A1D8F 40 A1D8F H181 H19 H 0 0 N N N N N N 45.493 7.751 35.470 -2.432 -3.530 -1.642 H181 A1D8F 41 A1D8F H201 H20 H 0 0 N N N N N N 46.222 6.670 42.386 3.327 -1.414 1.355 H201 A1D8F 42 A1D8F H211 H21 H 0 0 N N N N N N 46.911 5.784 40.453 0.737 -2.688 0.585 H211 A1D8F 43 A1D8F H221 H22 H 0 0 N N N N N N 45.529 11.013 38.826 0.882 1.595 -2.810 H221 A1D8F 44 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1D8F C02 C05 SING N N 1 A1D8F C02 O01 DOUB N N 2 A1D8F C02 O03 SING N N 3 A1D8F C04 O03 SING N N 4 A1D8F C05 C06 DOUB Y N 5 A1D8F C05 C20 SING Y N 6 A1D8F C06 C07 SING Y N 7 A1D8F C07 C08 DOUB Y N 8 A1D8F C07 O22 SING N N 9 A1D8F C08 C09 SING N N 10 A1D8F C08 C19 SING Y N 11 A1D8F C09 C10 DOUB N E 12 A1D8F C10 C11 SING N N 13 A1D8F C11 C12 SING N N 14 A1D8F C11 C18 DOUB N N 15 A1D8F C12 C13 SING N N 16 A1D8F C13 C14 SING N N 17 A1D8F C14 C15 DOUB N N 18 A1D8F C15 C16 SING N N 19 A1D8F C15 C17 SING N N 20 A1D8F C19 C20 DOUB Y N 21 A1D8F C19 O21 SING N N 22 A1D8F C04 H042 SING N N 23 A1D8F C04 H043 SING N N 24 A1D8F C04 H041 SING N N 25 A1D8F C06 H061 SING N N 26 A1D8F C09 H091 SING N N 27 A1D8F C10 H101 SING N N 28 A1D8F C12 H122 SING N N 29 A1D8F C12 H121 SING N N 30 A1D8F C13 H131 SING N N 31 A1D8F C13 H132 SING N N 32 A1D8F C14 H142 SING N N 33 A1D8F C16 H162 SING N N 34 A1D8F C16 H161 SING N N 35 A1D8F C16 H163 SING N N 36 A1D8F C17 H172 SING N N 37 A1D8F C17 H173 SING N N 38 A1D8F C17 H171 SING N N 39 A1D8F C18 H182 SING N N 40 A1D8F C18 H181 SING N N 41 A1D8F C20 H201 SING N N 42 A1D8F O21 H211 SING N N 43 A1D8F O22 H221 SING N N 44 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1D8F InChI InChI 1.06 "InChI=1S/C18H22O4/c1-12(2)6-5-7-13(3)8-9-15-16(19)10-14(11-17(15)20)18(21)22-4/h6,8-11,19-20H,3,5,7H2,1-2,4H3" A1D8F InChIKey InChI 1.06 PSKNWWGSUGMQHR-UHFFFAOYSA-N A1D8F SMILES_CANONICAL CACTVS 3.385 "COC(=O)c1cc(O)c(\C=C\C(=C)CCC=C(C)C)c(O)c1" A1D8F SMILES CACTVS 3.385 "COC(=O)c1cc(O)c(C=CC(=C)CCC=C(C)C)c(O)c1" A1D8F SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(=CCCC(=C)/C=C/c1c(cc(cc1O)C(=O)OC)O)C" A1D8F SMILES "OpenEye OEToolkits" 2.0.7 "CC(=CCCC(=C)C=Cc1c(cc(cc1O)C(=O)OC)O)C" # _pdbx_chem_comp_identifier.comp_id A1D8F _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "methyl 4-[(1~{E})-7-methyl-3-methylidene-octa-1,6-dienyl]-3,5-bis(oxidanyl)benzoate" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1D8F "Create component" 2024-05-22 PDBC A1D8F "Initial release" 2025-08-13 RCSB A1D8F "Modify synonyms" 2025-10-06 PDBC #