data_A1D8P # _chem_comp.id A1D8P _chem_comp.name "(3~{Z})-3-[[4-[bis(fluoranyl)methoxy]-3-cyclopentyloxy-phenyl]methylidene]-6-oxidanyl-1-benzofuran-2-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C21 H18 F2 O5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-06-05 _chem_comp.pdbx_modified_date 2025-02-07 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 388.361 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1D8P _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8ZQU _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBC _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1D8P C5 C1 C 0 1 Y N N N N N -23.044 -1.067 -28.969 3.710 -0.438 -0.300 C5 A1D8P 1 A1D8P C4 C2 C 0 1 Y N N N N N -23.975 -1.350 -29.963 4.451 0.384 0.556 C4 A1D8P 2 A1D8P O3 O1 O 0 1 N N N N N N -25.122 -1.933 -29.439 3.617 1.205 1.236 O3 A1D8P 3 A1D8P C2 C3 C 0 1 N N N N N N -24.958 -2.048 -28.081 2.331 1.006 0.906 C2 A1D8P 4 A1D8P O1 O2 O 0 1 N N N N N N -25.813 -2.555 -27.402 1.372 1.602 1.361 O1 A1D8P 5 A1D8P C6 C4 C 0 1 N N N N N N -23.629 -1.502 -27.716 2.289 -0.064 -0.105 C6 A1D8P 6 A1D8P C7 C5 C 0 1 N N N N N N -22.961 -1.288 -26.570 1.192 -0.591 -0.723 C7 A1D8P 7 A1D8P C8 C6 C 0 1 Y N N N N N -23.216 -1.721 -25.193 -0.120 0.039 -0.549 C8 A1D8P 8 A1D8P C9 C7 C 0 1 Y N N N N N -22.335 -1.298 -24.200 -0.235 1.436 -0.551 C9 A1D8P 9 A1D8P C10 C8 C 0 1 Y N N N N N -22.456 -1.737 -22.893 -1.469 2.024 -0.387 C10 A1D8P 10 A1D8P C11 C9 C 0 1 Y N N N N N -23.474 -2.616 -22.556 -2.602 1.237 -0.219 C11 A1D8P 11 A1D8P O12 O3 O 0 1 N N N N N N -23.633 -3.152 -21.297 -3.816 1.824 -0.058 O12 A1D8P 12 A1D8P C13 C10 C 0 1 N N N N N N -22.892 -2.696 -20.240 -3.853 3.252 -0.072 C13 A1D8P 13 A1D8P F14 F1 F 0 1 N N N N N N -21.587 -3.009 -20.396 -3.055 3.750 0.964 F14 A1D8P 14 A1D8P F15 F2 F 0 1 N N N N N N -23.015 -1.361 -20.063 -3.370 3.719 -1.299 F15 A1D8P 15 A1D8P C16 C11 C 0 1 Y N N N N N -24.377 -3.052 -23.546 -2.496 -0.154 -0.216 C16 A1D8P 16 A1D8P O17 O4 O 0 1 N N N N N N -25.328 -3.960 -23.144 -3.608 -0.919 -0.051 O17 A1D8P 17 A1D8P C18 C12 C 0 1 N N N N N N -26.527 -4.121 -23.956 -3.448 -2.333 -0.189 C18 A1D8P 18 A1D8P C19 C13 C 0 1 N N N N N N -26.296 -5.097 -25.102 -3.147 -2.981 1.185 C19 A1D8P 19 A1D8P C20 C14 C 0 1 N N N N N N -26.444 -6.459 -24.453 -3.604 -4.446 0.980 C20 A1D8P 20 A1D8P C21 C15 C 0 1 N N N N N N -27.433 -6.287 -23.311 -4.873 -4.329 0.111 C21 A1D8P 21 A1D8P C22 C16 C 0 1 N N N N N N -27.574 -4.791 -23.055 -4.774 -2.985 -0.632 C22 A1D8P 22 A1D8P C23 C17 C 0 1 Y N N N N N -24.242 -2.602 -24.849 -1.264 -0.753 -0.384 C23 A1D8P 23 A1D8P C24 C18 C 0 1 Y N N N N N -21.813 -0.535 -29.357 4.346 -1.370 -1.113 C24 A1D8P 24 A1D8P C25 C19 C 0 1 Y N N N N N -21.546 -0.297 -30.696 5.720 -1.491 -1.072 C25 A1D8P 25 A1D8P C26 C20 C 0 1 Y N N N N N -22.507 -0.587 -31.664 6.462 -0.682 -0.220 C26 A1D8P 26 A1D8P O27 O5 O 0 1 N N N N N N -22.269 -0.355 -32.985 7.815 -0.803 -0.185 O27 A1D8P 27 A1D8P C28 C21 C 0 1 Y N N N N N -23.740 -1.119 -31.298 5.834 0.254 0.586 C28 A1D8P 28 A1D8P H1 H1 H 0 1 N N N N N N -22.072 -0.686 -26.685 1.290 -1.472 -1.340 H1 A1D8P 29 A1D8P H2 H2 H 0 1 N N N N N N -21.540 -0.613 -24.456 0.643 2.050 -0.682 H2 A1D8P 30 A1D8P H3 H3 H 0 1 N N N N N N -21.761 -1.397 -22.140 -1.557 3.101 -0.389 H3 A1D8P 31 A1D8P H4 H4 H 0 1 N N N N N N -23.257 -3.196 -19.331 -4.880 3.591 0.066 H4 A1D8P 32 A1D8P H5 H5 H 0 1 N N N N N N -26.899 -3.157 -24.332 -2.655 -2.559 -0.901 H5 A1D8P 33 A1D8P H6 H6 H 0 1 N N N N N N -25.289 -4.972 -25.526 -2.081 -2.936 1.408 H6 A1D8P 34 A1D8P H7 H7 H 0 1 N N N N N N -27.047 -4.957 -25.894 -3.728 -2.502 1.974 H7 A1D8P 35 A1D8P H8 H8 H 0 1 N N N N N N -26.828 -7.188 -25.182 -2.835 -5.016 0.457 H8 A1D8P 36 A1D8P H9 H9 H 0 1 N N N N N N -25.473 -6.804 -24.067 -3.839 -4.911 1.938 H9 A1D8P 37 A1D8P H10 H10 H 0 1 N N N N N N -28.407 -6.715 -23.589 -4.913 -5.149 -0.605 H10 A1D8P 38 A1D8P H11 H11 H 0 1 N N N N N N -27.056 -6.790 -22.408 -5.761 -4.342 0.743 H11 A1D8P 39 A1D8P H12 H12 H 0 1 N N N N N N -27.375 -4.561 -21.998 -5.614 -2.345 -0.360 H12 A1D8P 40 A1D8P H13 H13 H 0 1 N N N N N N -28.585 -4.449 -23.321 -4.766 -3.153 -1.709 H13 A1D8P 41 A1D8P H14 H14 H 0 1 N N N N N N -24.937 -2.936 -25.605 -1.182 -1.830 -0.387 H14 A1D8P 42 A1D8P H15 H15 H 0 1 N N N N N N -21.066 -0.308 -28.611 3.767 -1.997 -1.775 H15 A1D8P 43 A1D8P H16 H16 H 0 1 N N N N N N -20.592 0.114 -30.990 6.218 -2.213 -1.702 H16 A1D8P 44 A1D8P H17 H17 H 0 1 N N N N N N -21.397 0.006 -33.091 8.137 -1.439 0.469 H17 A1D8P 45 A1D8P H18 H18 H 0 1 N N N N N N -24.491 -1.344 -32.041 6.420 0.877 1.245 H18 A1D8P 46 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1D8P O27 C26 SING N N 1 A1D8P C26 C28 DOUB Y N 2 A1D8P C26 C25 SING Y N 3 A1D8P C28 C4 SING Y N 4 A1D8P C25 C24 DOUB Y N 5 A1D8P C4 O3 SING N N 6 A1D8P C4 C5 DOUB Y N 7 A1D8P O3 C2 SING N N 8 A1D8P C24 C5 SING Y N 9 A1D8P C5 C6 SING N N 10 A1D8P C2 C6 SING N N 11 A1D8P C2 O1 DOUB N N 12 A1D8P C6 C7 DOUB N Z 13 A1D8P C7 C8 SING N N 14 A1D8P C8 C23 DOUB Y N 15 A1D8P C8 C9 SING Y N 16 A1D8P C19 C20 SING N N 17 A1D8P C19 C18 SING N N 18 A1D8P C23 C16 SING Y N 19 A1D8P C20 C21 SING N N 20 A1D8P C9 C10 DOUB Y N 21 A1D8P C18 O17 SING N N 22 A1D8P C18 C22 SING N N 23 A1D8P C16 O17 SING N N 24 A1D8P C16 C11 DOUB Y N 25 A1D8P C21 C22 SING N N 26 A1D8P C10 C11 SING Y N 27 A1D8P C11 O12 SING N N 28 A1D8P O12 C13 SING N N 29 A1D8P F14 C13 SING N N 30 A1D8P C13 F15 SING N N 31 A1D8P C7 H1 SING N N 32 A1D8P C9 H2 SING N N 33 A1D8P C10 H3 SING N N 34 A1D8P C13 H4 SING N N 35 A1D8P C18 H5 SING N N 36 A1D8P C19 H6 SING N N 37 A1D8P C19 H7 SING N N 38 A1D8P C20 H8 SING N N 39 A1D8P C20 H9 SING N N 40 A1D8P C21 H10 SING N N 41 A1D8P C21 H11 SING N N 42 A1D8P C22 H12 SING N N 43 A1D8P C22 H13 SING N N 44 A1D8P C23 H14 SING N N 45 A1D8P C24 H15 SING N N 46 A1D8P C25 H16 SING N N 47 A1D8P O27 H17 SING N N 48 A1D8P C28 H18 SING N N 49 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1D8P InChI InChI 1.06 "InChI=1S/C21H18F2O5/c22-21(23)28-17-8-5-12(10-19(17)26-14-3-1-2-4-14)9-16-15-7-6-13(24)11-18(15)27-20(16)25/h5-11,14,21,24H,1-4H2/b16-9-" A1D8P InChIKey InChI 1.06 MKDZECMATKTJOB-SXGWCWSVSA-N A1D8P SMILES_CANONICAL CACTVS 3.385 "Oc1ccc\2c(OC(=O)C\2=C\c3ccc(OC(F)F)c(OC4CCCC4)c3)c1" A1D8P SMILES CACTVS 3.385 "Oc1ccc2c(OC(=O)C2=Cc3ccc(OC(F)F)c(OC4CCCC4)c3)c1" A1D8P SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(c(cc1/C=C\2/c3ccc(cc3OC2=O)O)OC4CCCC4)OC(F)F" A1D8P SMILES "OpenEye OEToolkits" 2.0.7 "c1cc(c(cc1C=C2c3ccc(cc3OC2=O)O)OC4CCCC4)OC(F)F" # _pdbx_chem_comp_identifier.comp_id A1D8P _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(3~{Z})-3-[[4-[bis(fluoranyl)methoxy]-3-cyclopentyloxy-phenyl]methylidene]-6-oxidanyl-1-benzofuran-2-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1D8P "Create component" 2024-06-05 PDBC A1D8P "Initial release" 2025-02-12 RCSB #