data_A1D8R # _chem_comp.id A1D8R _chem_comp.name "(2~{S})-2,4-bis(azanyl)-3,3-dimethyl-butanoic acid" _chem_comp.type "L-peptide linking" _chem_comp.pdbx_type ATOMP _chem_comp.formula "C6 H14 N2 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-06-06 _chem_comp.pdbx_modified_date 2025-06-06 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 146.188 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1D8R _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag Y _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 8ZQ8 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBC _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1D8R N N1 N 0 1 N N N Y Y N 10.937 4.298 22.200 0.447 1.910 0.543 N1 A1D8R 1 A1D8R CA C9 C 0 1 N N S N Y N 10.065 3.326 22.833 0.474 0.449 0.689 C9 A1D8R 2 A1D8R C C10 C 0 1 N N N N Y Y 10.100 2.049 21.988 1.746 -0.093 0.091 C10 A1D8R 3 A1D8R CB C11 C 0 1 N N N N N N 8.662 3.885 23.138 -0.729 -0.158 -0.036 C11 A1D8R 4 A1D8R O O3 O 0 1 N N N N Y Y 9.714 2.014 20.809 2.368 0.568 -0.706 O3 A1D8R 5 A1D8R C16 C16 C 0 1 N N N N N N 7.933 4.410 21.876 -2.022 0.392 0.570 C16 A1D8R 6 A1D8R C17 C17 C 0 1 N N N N N N 8.802 5.009 24.180 -0.667 0.208 -1.521 C17 A1D8R 7 A1D8R C18 C18 C 0 1 N N N N N N 7.813 2.779 23.757 -0.702 -1.680 0.115 C18 A1D8R 8 A1D8R N3 N3 N 0 1 N N N N N N 7.230 3.407 21.071 -3.176 -0.190 -0.126 N3 A1D8R 9 A1D8R H2 H8 H 0 1 N N N Y Y N 10.934 5.145 22.732 0.488 2.177 -0.429 H8 A1D8R 10 A1D8R HA H9 H 0 1 N N N N Y N 10.512 3.068 23.804 0.429 0.188 1.747 H9 A1D8R 11 A1D8R H15 H15 H 0 1 N N N N N N 8.683 4.892 21.232 -2.066 0.132 1.628 H15 A1D8R 12 A1D8R H16 H16 H 0 1 N N N N N N 7.194 5.157 22.202 -2.041 1.477 0.462 H16 A1D8R 13 A1D8R H17 H17 H 0 1 N N N N N N 9.321 4.622 25.070 0.254 -0.184 -1.953 H17 A1D8R 14 A1D8R H18 H18 H 0 1 N N N N N N 9.382 5.838 23.749 -1.524 -0.224 -2.038 H18 A1D8R 15 A1D8R H19 H19 H 0 1 N N N N N N 7.803 5.370 24.466 -0.686 1.292 -1.629 H19 A1D8R 16 A1D8R H20 H20 H 0 1 N N N N N N 8.314 2.392 24.657 -0.746 -1.941 1.173 H20 A1D8R 17 A1D8R H21 H21 H 0 1 N N N N N N 6.828 3.184 24.032 -1.559 -2.112 -0.401 H21 A1D8R 18 A1D8R H22 H22 H 0 1 N N N N N N 7.685 1.964 23.029 0.219 -2.072 -0.317 H22 A1D8R 19 A1D8R H23 H23 H 0 1 N N N N N N 6.798 3.852 20.286 -3.146 -1.198 -0.096 H23 A1D8R 20 A1D8R H1 H2 H 0 1 N Y N N N N 7.883 2.722 20.748 -4.043 0.158 0.257 H2 A1D8R 21 A1D8R H H3 H 0 1 N Y N Y Y N 11.867 3.934 22.158 -0.365 2.304 0.993 H3 A1D8R 22 A1D8R OXT OXT O 0 1 N Y N N Y Y ? ? ? 2.189 -1.310 0.445 OXT A1D8R 23 A1D8R HXT HXT H 0 1 N Y N N Y Y ? ? ? 3.010 -1.615 0.035 HXT A1D8R 24 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1D8R O C DOUB N N 1 A1D8R N3 C16 SING N N 2 A1D8R C16 CB SING N N 3 A1D8R C CA SING N N 4 A1D8R N CA SING N N 5 A1D8R CA CB SING N N 6 A1D8R CB C18 SING N N 7 A1D8R CB C17 SING N N 8 A1D8R N H2 SING N N 9 A1D8R CA HA SING N N 10 A1D8R C16 H15 SING N N 11 A1D8R C16 H16 SING N N 12 A1D8R C17 H17 SING N N 13 A1D8R C17 H18 SING N N 14 A1D8R C17 H19 SING N N 15 A1D8R C18 H20 SING N N 16 A1D8R C18 H21 SING N N 17 A1D8R C18 H22 SING N N 18 A1D8R N3 H23 SING N N 19 A1D8R N3 H1 SING N N 20 A1D8R N H SING N N 21 A1D8R C OXT SING N N 22 A1D8R OXT HXT SING N N 23 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1D8R InChI InChI 1.06 "InChI=1S/C6H14N2O2/c1-6(2,3-7)4(8)5(9)10/h4H,3,7-8H2,1-2H3,(H,9,10)/t4-/m1/s1" A1D8R InChIKey InChI 1.06 CCTPBLHNQLRMPA-SCSAIBSYSA-N A1D8R SMILES_CANONICAL CACTVS 3.385 "CC(C)(CN)[C@H](N)C(O)=O" A1D8R SMILES CACTVS 3.385 "CC(C)(CN)[CH](N)C(O)=O" A1D8R SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)(CN)[C@@H](C(=O)O)N" A1D8R SMILES "OpenEye OEToolkits" 2.0.7 "CC(C)(CN)C(C(=O)O)N" # _pdbx_chem_comp_identifier.comp_id A1D8R _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "(2~{S})-2,4-bis(azanyl)-3,3-dimethyl-butanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1D8R "Create component" 2024-06-06 PDBC A1D8R "Initial release" 2025-06-11 RCSB #