data_A1D9F # _chem_comp.id A1D9F _chem_comp.name "~{N}-[(1-fluoranylcyclohexyl)methyl]-~{N}-methyl-4-(2-methylsulfanylphenyl)-2-methylsulfonyl-benzamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C23 H28 F N O3 S2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2024-06-20 _chem_comp.pdbx_modified_date 2025-05-02 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 449.602 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1D9F _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 9II5 _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site PDBC _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1D9F N1 N1 N 0 1 N N N N N N 14.641 -5.622 11.763 -2.431 -0.407 0.792 N1 A1D9F 1 A1D9F C4 C1 C 0 1 N N N N N N 13.334 -2.009 11.495 -6.075 0.180 -0.073 C4 A1D9F 2 A1D9F C5 C2 C 0 1 N N N N N N 12.335 -1.287 10.618 -6.815 1.416 -0.588 C5 A1D9F 3 A1D9F C6 C3 C 0 1 N N N N N N 12.698 -1.417 9.168 -6.666 2.557 0.420 C6 A1D9F 4 A1D9F C7 C4 C 0 1 N N N N N N 12.709 -2.892 8.767 -5.183 2.889 0.599 C7 A1D9F 5 A1D9F C8 C5 C 0 1 N N N N N N 13.714 -3.642 9.631 -4.442 1.653 1.114 C8 A1D9F 6 A1D9F C10 C6 C 0 1 Y N N N N N 15.886 -7.459 10.709 -0.124 -0.384 -0.022 C10 A1D9F 7 A1D9F C13 C7 C 0 1 Y N N N N N 15.986 -10.150 9.923 2.591 0.019 0.375 C13 A1D9F 8 A1D9F C15 C8 C 0 1 Y N N N N N 17.209 -12.268 9.067 4.699 1.286 -0.064 C15 A1D9F 9 A1D9F C17 C9 C 0 1 Y N N N N N 17.195 -13.621 8.780 6.058 1.482 0.146 C17 A1D9F 10 A1D9F C20 C10 C 0 1 Y N N N N N 14.957 -12.348 9.757 4.758 -0.609 1.434 C20 A1D9F 11 A1D9F C21 C11 C 0 1 Y N N N N N 16.943 -9.588 10.782 2.115 -1.251 0.042 C21 A1D9F 12 A1D9F C22 C12 C 0 1 Y N N N N N 16.918 -8.272 11.178 0.768 -1.452 -0.154 C22 A1D9F 13 A1D9F C1 C13 C 0 1 N N N N N N 15.709 -6.012 11.036 -1.570 -0.600 -0.227 C1 A1D9F 14 A1D9F C11 C14 C 0 1 Y N N N N N 14.920 -8.016 9.858 0.353 0.887 0.310 C11 A1D9F 15 A1D9F C12 C15 C 0 1 Y N N N N N 14.962 -9.338 9.475 1.701 1.086 0.507 C12 A1D9F 16 A1D9F C14 C16 C 0 1 Y N N N N N 16.076 -11.589 9.555 4.041 0.234 0.586 C14 A1D9F 17 A1D9F C16 C17 C 0 1 N N N N N N 19.979 -12.377 9.492 5.078 3.523 -1.704 C16 A1D9F 18 A1D9F C18 C18 C 0 1 Y N N N N N 16.047 -14.347 8.988 6.756 0.639 0.988 C18 A1D9F 19 A1D9F C19 C19 C 0 1 Y N N N N N 14.933 -13.693 9.473 6.108 -0.404 1.628 C19 A1D9F 20 A1D9F C2 C20 C 0 1 N N N N N N 14.458 -4.182 12.019 -3.851 -0.724 0.620 C2 A1D9F 21 A1D9F C23 C21 C 0 1 N N N N N N 19.408 -7.129 11.127 -0.871 -3.531 0.836 C23 A1D9F 22 A1D9F C3 C22 C 0 1 N N N N N N 13.422 -3.486 11.126 -4.592 0.512 0.106 C3 A1D9F 23 A1D9F C9 C23 C 0 1 N N N N N N 13.657 -6.532 12.313 -1.946 0.115 2.072 C9 A1D9F 24 A1D9F F1 F1 F 0 1 N N N N N N 12.172 -4.107 11.403 -4.050 0.902 -1.124 F1 A1D9F 25 A1D9F O1 O1 O 0 1 N N N N N N 16.511 -5.200 10.607 -1.984 -0.951 -1.315 O1 A1D9F 26 A1D9F O2 O2 O 0 1 N N N N N N 17.684 -6.648 13.013 -0.629 -2.840 -1.729 O2 A1D9F 27 A1D9F O3 O3 O 0 1 N N N N N N 18.746 -8.894 12.853 1.335 -3.863 -0.627 O3 A1D9F 28 A1D9F S1 S1 S 0 1 N N N N N N 18.688 -11.392 8.737 3.806 2.360 -1.138 S1 A1D9F 29 A1D9F S2 S2 S 0 1 N N N N N N 18.210 -7.702 12.250 0.168 -3.055 -0.572 S2 A1D9F 30 A1D9F H4_2 H1 H 0 0 N N N N N N 13.021 -1.919 12.546 -6.497 -0.124 0.885 H4_2 A1D9F 31 A1D9F H4_1 H2 H 0 0 N N N N N N 14.324 -1.547 11.367 -6.181 -0.633 -0.791 H4_1 A1D9F 32 A1D9F H5_2 H3 H 0 0 N N N N N N 11.337 -1.720 10.779 -6.393 1.720 -1.546 H5_2 A1D9F 33 A1D9F H5_1 H4 H 0 0 N N N N N N 12.321 -0.221 10.891 -7.872 1.180 -0.715 H5_1 A1D9F 34 A1D9F H6_1 H5 H 0 0 N N N N N N 11.959 -0.878 8.557 -7.193 3.438 0.054 H6_1 A1D9F 35 A1D9F H6_2 H6 H 0 0 N N N N N N 13.696 -0.986 9.001 -7.088 2.253 1.378 H6_2 A1D9F 36 A1D9F H7_2 H7 H 0 0 N N N N N N 11.706 -3.320 8.914 -4.760 3.193 -0.359 H7_2 A1D9F 37 A1D9F H7_1 H8 H 0 0 N N N N N N 12.995 -2.983 7.709 -5.076 3.701 1.317 H7_1 A1D9F 38 A1D9F H8_1 H9 H 0 0 N N N N N N 14.721 -3.250 9.424 -3.386 1.889 1.241 H8_1 A1D9F 39 A1D9F H8_2 H10 H 0 0 N N N N N N 13.676 -4.710 9.372 -4.865 1.349 2.072 H8_2 A1D9F 40 A1D9F HC17 H11 H 0 0 N N N N N N 18.081 -14.104 8.395 6.569 2.294 -0.350 HC17 A1D9F 41 A1D9F HC20 H12 H 0 0 N N N N N N 14.068 -11.878 10.150 4.256 -1.421 1.939 HC20 A1D9F 42 A1D9F HC21 H13 H 0 0 N N N N N N 17.738 -10.220 11.150 2.804 -2.076 -0.060 HC21 A1D9F 43 A1D9F HC11 H14 H 0 0 N N N N N N 14.120 -7.390 9.492 -0.335 1.713 0.412 HC11 A1D9F 44 A1D9F HC12 H15 H 0 0 N N N N N N 14.197 -9.739 8.827 2.070 2.068 0.763 HC12 A1D9F 45 A1D9F H163 H16 H 0 0 N N N N N N 20.953 -11.892 9.330 5.500 4.045 -0.845 H163 A1D9F 46 A1D9F H162 H17 H 0 0 N N N N N N 19.789 -12.465 10.572 5.867 2.975 -2.220 H162 A1D9F 47 A1D9F H161 H18 H 0 0 N N N N N N 19.988 -13.379 9.038 4.632 4.246 -2.386 H161 A1D9F 48 A1D9F HC18 H19 H 0 0 N N N N N N 16.017 -15.406 8.777 7.812 0.794 1.148 HC18 A1D9F 49 A1D9F HC19 H20 H 0 0 N N N N N N 14.022 -14.250 9.633 6.662 -1.058 2.285 HC19 A1D9F 50 A1D9F H2_2 H21 H 0 0 N N N N N N 14.142 -4.060 13.066 -3.958 -1.537 -0.098 H2_2 A1D9F 51 A1D9F H2_1 H22 H 0 0 N N N N N N 15.427 -3.684 11.868 -4.273 -1.028 1.578 H2_1 A1D9F 52 A1D9F H232 H23 H 0 0 N N N N N N 20.276 -6.743 11.681 -1.732 -2.865 0.895 H232 A1D9F 53 A1D9F H231 H24 H 0 0 N N N N N N 19.727 -7.957 10.477 -1.214 -4.557 0.704 H231 A1D9F 54 A1D9F H233 H25 H 0 0 N N N N N N 18.979 -6.325 10.512 -0.291 -3.457 1.757 H233 A1D9F 55 A1D9F H9_1 H26 H 0 0 N N N N N N 12.893 -5.960 12.860 -1.699 -0.716 2.732 H9_1 A1D9F 56 A1D9F H9_2 H27 H 0 0 N N N N N N 13.179 -7.093 11.496 -1.057 0.722 1.903 H9_2 A1D9F 57 A1D9F H9_3 H28 H 0 0 N N N N N N 14.151 -7.235 13.000 -2.722 0.726 2.532 H9_3 A1D9F 58 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1D9F O1 C1 DOUB N N 1 A1D9F C1 N1 SING N N 2 A1D9F C1 C10 SING N N 3 A1D9F N1 C2 SING N N 4 A1D9F N1 C9 SING N N 5 A1D9F C2 C3 SING N N 6 A1D9F C3 F1 SING N N 7 A1D9F C3 C4 SING N N 8 A1D9F C3 C8 SING N N 9 A1D9F C4 C5 SING N N 10 A1D9F C5 C6 SING N N 11 A1D9F C6 C7 SING N N 12 A1D9F C7 C8 SING N N 13 A1D9F C10 C11 DOUB Y N 14 A1D9F C10 C22 SING Y N 15 A1D9F C11 C12 SING Y N 16 A1D9F C12 C13 DOUB Y N 17 A1D9F C13 C14 SING N N 18 A1D9F C13 C21 SING Y N 19 A1D9F C14 C15 DOUB Y N 20 A1D9F C14 C20 SING Y N 21 A1D9F C15 S1 SING N N 22 A1D9F C15 C17 SING Y N 23 A1D9F S1 C16 SING N N 24 A1D9F C17 C18 DOUB Y N 25 A1D9F C18 C19 SING Y N 26 A1D9F C19 C20 DOUB Y N 27 A1D9F C21 C22 DOUB Y N 28 A1D9F C22 S2 SING N N 29 A1D9F S2 O2 DOUB N N 30 A1D9F S2 C23 SING N N 31 A1D9F S2 O3 DOUB N N 32 A1D9F C4 H4_2 SING N N 33 A1D9F C4 H4_1 SING N N 34 A1D9F C5 H5_2 SING N N 35 A1D9F C5 H5_1 SING N N 36 A1D9F C6 H6_1 SING N N 37 A1D9F C6 H6_2 SING N N 38 A1D9F C7 H7_2 SING N N 39 A1D9F C7 H7_1 SING N N 40 A1D9F C8 H8_1 SING N N 41 A1D9F C8 H8_2 SING N N 42 A1D9F C17 HC17 SING N N 43 A1D9F C20 HC20 SING N N 44 A1D9F C21 HC21 SING N N 45 A1D9F C11 HC11 SING N N 46 A1D9F C12 HC12 SING N N 47 A1D9F C16 H163 SING N N 48 A1D9F C16 H162 SING N N 49 A1D9F C16 H161 SING N N 50 A1D9F C18 HC18 SING N N 51 A1D9F C19 HC19 SING N N 52 A1D9F C2 H2_2 SING N N 53 A1D9F C2 H2_1 SING N N 54 A1D9F C23 H232 SING N N 55 A1D9F C23 H231 SING N N 56 A1D9F C23 H233 SING N N 57 A1D9F C9 H9_1 SING N N 58 A1D9F C9 H9_2 SING N N 59 A1D9F C9 H9_3 SING N N 60 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1D9F InChI InChI 1.06 "InChI=1S/C23H28FNO3S2/c1-25(16-23(24)13-7-4-8-14-23)22(26)19-12-11-17(15-21(19)30(3,27)28)18-9-5-6-10-20(18)29-2/h5-6,9-12,15H,4,7-8,13-14,16H2,1-3H3" A1D9F InChIKey InChI 1.06 PAFGSEZHUCSUMW-UHFFFAOYSA-N A1D9F SMILES_CANONICAL CACTVS 3.385 "CSc1ccccc1c2ccc(C(=O)N(C)CC3(F)CCCCC3)c(c2)[S](C)(=O)=O" A1D9F SMILES CACTVS 3.385 "CSc1ccccc1c2ccc(C(=O)N(C)CC3(F)CCCCC3)c(c2)[S](C)(=O)=O" A1D9F SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CN(CC1(CCCCC1)F)C(=O)c2ccc(cc2S(=O)(=O)C)c3ccccc3SC" A1D9F SMILES "OpenEye OEToolkits" 2.0.7 "CN(CC1(CCCCC1)F)C(=O)c2ccc(cc2S(=O)(=O)C)c3ccccc3SC" # _pdbx_chem_comp_identifier.comp_id A1D9F _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.7 _pdbx_chem_comp_identifier.identifier "~{N}-[(1-fluoranylcyclohexyl)methyl]-~{N}-methyl-4-(2-methylsulfanylphenyl)-2-methylsulfonyl-benzamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1D9F "Create component" 2024-06-20 PDBC A1D9F "Initial release" 2025-05-07 RCSB #