data_A1DAE # _chem_comp.id A1DAE _chem_comp.name "3-chloro-5-{[(1R)-1-methoxy-1-methyl-3-oxo-1,3-dihydro-2-benzofuran-4-yl]oxy}-4H-1,2,6-thiadiazin-4-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C13 H9 Cl N2 O5 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2026-03-12 _chem_comp.pdbx_modified_date 2026-08-21 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 340.739 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1DAE _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 11SE _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1DAE C2 C1 C 0 1 Y N N N N N -26.530 -3.699 -16.507 0.657 1.150 -0.876 C2 A1DAE 1 A1DAE C3 C2 C 0 1 N N N N N N -25.233 -2.271 -14.734 1.586 -1.242 -0.295 C3 A1DAE 2 A1DAE C4 C3 C 0 1 N N R N N N -23.148 -3.262 -15.123 3.648 -0.549 0.383 C4 A1DAE 3 A1DAE C5 C4 C 0 1 Y N N N N N -24.048 -4.804 -17.051 3.166 2.017 -0.052 C5 A1DAE 4 A1DAE C6 C5 C 0 1 Y N N N N N -26.408 -4.645 -17.513 0.974 2.500 -0.903 C6 A1DAE 5 A1DAE C7 C6 C 0 1 N N N N N N -22.053 -2.466 -15.792 4.045 -0.453 1.858 C7 A1DAE 6 A1DAE C8 C7 C 0 1 Y N N N N N -25.163 -5.196 -17.778 2.220 2.930 -0.494 C8 A1DAE 7 A1DAE C11 C8 C 0 1 N N N N N N -29.738 -1.918 -16.253 -2.749 -0.041 -0.707 C11 A1DAE 8 A1DAE C12 C9 C 0 1 N N N N N N -30.541 -1.032 -17.066 -3.800 -0.304 0.181 C12 A1DAE 9 A1DAE O4 O1 O 0 1 N N N N N N -30.143 -2.331 -15.149 -2.919 -0.306 -1.889 O4 A1DAE 10 A1DAE N1 N1 N 0 1 N N N N N N -30.178 -0.562 -18.228 -3.706 -0.052 1.465 N1 A1DAE 11 A1DAE S S1 S 0 1 N N N N N N -28.747 -0.892 -18.989 -2.361 0.563 1.990 S A1DAE 12 A1DAE N N2 N 0 1 N N N N N N -27.918 -1.886 -17.993 -1.242 0.822 0.920 N A1DAE 13 A1DAE C9 C10 C 0 1 N N N N N N -28.407 -2.288 -16.851 -1.512 0.513 -0.328 C9 A1DAE 14 A1DAE O O2 O 0 1 N N N N N N -27.795 -3.240 -16.107 -0.568 0.728 -1.279 O A1DAE 15 A1DAE C C11 C 0 1 Y N N N N N -25.406 -3.278 -15.787 1.612 0.222 -0.435 C A1DAE 16 A1DAE C1 C12 C 0 1 Y N N N N N -24.177 -3.843 -16.057 2.869 0.676 -0.024 C1 A1DAE 17 A1DAE O3 O3 O 0 1 N N N N N N -22.601 -4.249 -14.207 4.816 -0.681 -0.431 O3 A1DAE 18 A1DAE C10 C13 C 0 1 N N N N N N -23.406 -5.233 -13.542 5.559 -1.878 -0.191 C10 A1DAE 19 A1DAE O1 O4 O 0 1 N N N N N N -23.917 -2.273 -14.346 2.764 -1.684 0.178 O1 A1DAE 20 A1DAE O2 O5 O 0 1 N N N N N N -26.027 -1.509 -14.243 0.637 -1.949 -0.568 O2 A1DAE 21 A1DAE H H1 H 0 1 N N N N N N -23.084 -5.245 -17.257 4.139 2.361 0.266 H A1DAE 22 A1DAE H1 H2 H 0 1 N N N N N N -27.273 -4.950 -18.084 0.243 3.217 -1.246 H1 A1DAE 23 A1DAE H2 H3 H 0 1 N N N N N N -21.357 -2.087 -15.030 3.147 -0.380 2.471 H2 A1DAE 24 A1DAE H3 H4 H 0 1 N N N N N N -21.509 -3.112 -16.497 4.607 -1.343 2.141 H3 A1DAE 25 A1DAE H4 H5 H 0 1 N N N N N N -22.496 -1.620 -16.337 4.663 0.431 2.011 H4 A1DAE 26 A1DAE H5 H6 H 0 1 N N N N N N -25.061 -5.937 -18.557 2.460 3.983 -0.518 H5 A1DAE 27 A1DAE H6 H8 H 0 1 N N N N N N -22.766 -5.861 -12.905 5.887 -1.900 0.848 H6 A1DAE 28 A1DAE H7 H9 H 0 1 N N N N N N -24.161 -4.730 -12.920 4.927 -2.743 -0.392 H7 A1DAE 29 A1DAE H8 H10 H 0 1 N N N N N N -23.909 -5.862 -14.291 6.429 -1.903 -0.848 H8 A1DAE 30 A1DAE CL1 CL1 CL 0 0 N Y N N N N -32.357 -0.884 -17.277 -5.273 -0.984 -0.438 CL1 A1DAE 31 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1DAE C C1 DOUB Y N 1 A1DAE C C2 SING Y N 2 A1DAE C C3 SING N N 3 A1DAE C4 C1 SING N N 4 A1DAE C1 C5 SING Y N 5 A1DAE C2 O SING N N 6 A1DAE C6 C2 DOUB Y N 7 A1DAE C3 O1 SING N N 8 A1DAE O2 C3 DOUB N N 9 A1DAE O1 C4 SING N N 10 A1DAE O3 C4 SING N N 11 A1DAE C7 C4 SING N N 12 A1DAE C5 C8 DOUB Y N 13 A1DAE O C9 SING N N 14 A1DAE C8 C6 SING Y N 15 A1DAE C10 O3 SING N N 16 A1DAE C9 C11 SING N N 17 A1DAE C9 N DOUB N N 18 A1DAE C12 C11 SING N N 19 A1DAE C11 O4 DOUB N N 20 A1DAE N S SING N N 21 A1DAE N1 C12 DOUB N N 22 A1DAE S N1 SING N N 23 A1DAE C5 H SING N N 24 A1DAE C6 H1 SING N N 25 A1DAE C7 H2 SING N N 26 A1DAE C7 H3 SING N N 27 A1DAE C7 H4 SING N N 28 A1DAE C8 H5 SING N N 29 A1DAE C10 H6 SING N N 30 A1DAE C10 H7 SING N N 31 A1DAE C10 H8 SING N N 32 A1DAE C12 CL1 SING N N 33 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1DAE SMILES ACDLabs 14.52 "O=C1C(Oc2cccc3c2C(=O)OC3(C)OC)=NSN=C1Cl" A1DAE InChI InChI 1.06 "InChI=1S/C13H9ClN2O5S/c1-13(19-2)6-4-3-5-7(8(6)12(18)21-13)20-11-9(17)10(14)15-22-16-11/h3-5H,1-2H3/t13-/m1/s1" A1DAE InChIKey InChI 1.06 RQJUWVIMZLHWNC-CYBMUJFWSA-N A1DAE SMILES_CANONICAL CACTVS 3.385 "CO[C@]1(C)OC(=O)c2c(OC3=NSN=C(Cl)C3=O)cccc12" A1DAE SMILES CACTVS 3.385 "CO[C]1(C)OC(=O)c2c(OC3=NSN=C(Cl)C3=O)cccc12" A1DAE SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "C[C@@]1(c2cccc(c2C(=O)O1)OC3=NSN=C(C3=O)Cl)OC" A1DAE SMILES "OpenEye OEToolkits" 3.1.0.0 "CC1(c2cccc(c2C(=O)O1)OC3=NSN=C(C3=O)Cl)OC" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1DAE "SYSTEMATIC NAME" ACDLabs 14.52 "3-chloro-5-{[(1R)-1-methoxy-1-methyl-3-oxo-1,3-dihydro-2-benzofuran-4-yl]oxy}-4H-1,2,6-thiadiazin-4-one" A1DAE "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "3-chloranyl-5-[[(1~{R})-1-methoxy-1-methyl-3-oxidanylidene-2-benzofuran-4-yl]oxy]-1,2,6-thiadiazin-4-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1DAE "Create component" 2026-03-12 RCSB A1DAE "Modify PCM" 2026-03-12 RCSB A1DAE "Initial release" 2026-08-26 RCSB # _pdbx_chem_comp_pcm.pcm_id 1 _pdbx_chem_comp_pcm.comp_id A1DAE _pdbx_chem_comp_pcm.modified_residue_id CYS _pdbx_chem_comp_pcm.type None _pdbx_chem_comp_pcm.category "Covalent chemical modification" _pdbx_chem_comp_pcm.position "Amino-acid side chain" _pdbx_chem_comp_pcm.polypeptide_position "Any position" _pdbx_chem_comp_pcm.comp_id_linking_atom C12 _pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG _pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ? _pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ? #