data_A1DBE # _chem_comp.id A1DBE _chem_comp.name "N-[(1R)-1-(2,3-dihydro[1,4]dioxino[2,3-c]pyridin-7-yl)-2-methylpropyl]-7H-pyrrolo[2,3-d]pyrimidin-4-amine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C17 H19 N5 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2026-03-25 _chem_comp.pdbx_modified_date 2026-09-11 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 325.365 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1DBE _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 14AP _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1DBE N2 N1 N 0 1 Y N N N N N -44.309 -29.592 4.961 -2.688 -1.038 -1.018 N2 A1DBE 1 A1DBE C3 C1 C 0 1 N N N N N N -42.085 -30.087 1.042 -1.674 -2.824 0.743 C3 A1DBE 2 A1DBE C6 C2 C 0 1 Y N N N N N -44.356 -29.418 6.278 -3.896 -1.097 -1.547 C6 A1DBE 3 A1DBE C9 C3 C 0 1 Y N N N N N -48.054 -28.951 4.562 -3.367 2.077 1.010 C9 A1DBE 4 A1DBE C12 C4 C 0 1 Y N N N N N -44.292 -32.632 0.947 2.115 -0.287 -0.870 C12 A1DBE 5 A1DBE C14 C5 C 0 1 Y N N N N N -46.057 -33.132 -0.633 3.784 0.567 0.615 C14 A1DBE 6 A1DBE C17 C6 C 0 1 N N N N N N -44.643 -35.325 -1.490 5.345 1.277 -1.524 C17 A1DBE 7 A1DBE C1 C7 C 0 1 N N N N N N -43.962 -28.488 0.533 0.772 -3.306 0.573 C1 A1DBE 8 A1DBE C10 C8 C 0 1 Y N N N N N -48.722 -28.683 5.733 -4.601 2.596 0.897 C10 A1DBE 9 A1DBE C11 C9 C 0 1 Y N N N N N -44.941 -31.405 1.194 1.290 -0.456 0.226 C11 A1DBE 10 A1DBE C13 C10 C 0 1 Y N N N N N -44.860 -33.514 0.011 3.389 0.234 -0.678 C13 A1DBE 11 A1DBE C15 C11 C 0 1 Y N N N N N -46.630 -31.888 -0.310 2.896 0.377 1.659 C15 A1DBE 12 A1DBE C16 C12 C 0 1 N N N N N N -46.175 -35.290 -1.617 5.994 0.915 -0.182 C16 A1DBE 13 A1DBE C2 C13 C 0 1 N N N N N N -43.351 -29.408 1.603 -0.270 -2.247 0.937 C2 A1DBE 14 A1DBE C4 C14 C 0 1 N N R N N N -44.371 -30.412 2.199 -0.092 -1.025 0.034 C4 A1DBE 15 A1DBE C5 C15 C 0 1 Y N N N N N -45.461 -29.477 4.245 -2.357 -0.068 -0.169 C5 A1DBE 16 A1DBE C7 C16 C 0 1 Y N N N N N -46.565 -29.007 6.308 -4.601 0.790 -0.435 C7 A1DBE 17 A1DBE C8 C17 C 0 1 Y N N N N N -46.676 -29.167 4.909 -3.327 0.894 0.152 C8 A1DBE 18 A1DBE N1 N2 N 0 1 N N N N N N -45.434 -29.665 2.863 -1.090 -0.010 0.383 N1 A1DBE 19 A1DBE N3 N3 N 0 1 Y N N N N N -45.421 -29.127 7.020 -4.836 -0.217 -1.274 N3 A1DBE 20 A1DBE N4 N4 N 0 1 Y N N N N N -47.823 -28.719 6.784 -5.348 1.835 0.036 N4 A1DBE 21 A1DBE N5 N5 N 0 1 Y N N N N N -46.091 -31.034 0.584 1.696 -0.126 1.436 N5 A1DBE 22 A1DBE O1 O1 O 0 1 N N N N N N -46.667 -33.948 -1.556 5.016 1.091 0.852 O1 A1DBE 23 A1DBE O2 O2 O 0 1 N N N N N N -44.255 -34.717 -0.261 4.225 0.407 -1.732 O2 A1DBE 24 A1DBE H6 H1 H 0 1 N N N N N N -41.650 -30.744 1.809 -1.800 -3.695 1.386 H6 A1DBE 25 A1DBE H7 H2 H 0 1 N N N N N N -42.351 -30.683 0.156 -2.416 -2.070 1.002 H7 A1DBE 26 A1DBE H5 H3 H 0 1 N N N N N N -41.351 -29.318 0.760 -1.804 -3.120 -0.298 H5 A1DBE 27 A1DBE H10 H4 H 0 1 N N N N N N -43.421 -29.525 6.807 -4.123 -1.901 -2.232 H10 A1DBE 28 A1DBE H11 H5 H 0 1 N N N N N N -48.482 -28.992 3.571 -2.560 2.460 1.617 H11 A1DBE 29 A1DBE H14 H6 H 0 1 N N N N N N -43.380 -32.888 1.465 1.777 -0.560 -1.859 H14 A1DBE 30 A1DBE H18 H7 H 0 1 N N N N N N -44.297 -36.369 -1.508 5.006 2.313 -1.501 H18 A1DBE 31 A1DBE H19 H8 H 0 1 N N N N N N -44.193 -34.775 -2.330 6.067 1.145 -2.330 H19 A1DBE 32 A1DBE H2 H9 H 0 1 N N N N N N -44.865 -28.005 0.936 0.642 -3.601 -0.468 H2 A1DBE 33 A1DBE H1 H10 H 0 1 N N N N N N -43.229 -27.718 0.250 1.772 -2.894 0.711 H1 A1DBE 34 A1DBE H3 H11 H 0 1 N N N N N N -44.229 -29.083 -0.353 0.645 -4.177 1.216 H3 A1DBE 35 A1DBE H12 H12 H 0 1 N N N N N N -49.779 -28.477 5.819 -4.952 3.480 1.409 H12 A1DBE 36 A1DBE H15 H13 H 0 1 N N N N N N -47.548 -31.603 -0.803 3.192 0.630 2.667 H15 A1DBE 37 A1DBE H16 H14 H 0 1 N N N N N N -46.617 -35.872 -0.795 6.331 -0.121 -0.197 H16 A1DBE 38 A1DBE H17 H15 H 0 1 N N N N N N -46.466 -35.736 -2.580 6.843 1.575 -0.001 H17 A1DBE 39 A1DBE H4 H16 H 0 1 N N N N N N -43.024 -28.761 2.430 -0.140 -1.951 1.978 H4 A1DBE 40 A1DBE H8 H17 H 0 1 N N N N N N -43.836 -30.994 2.964 -0.223 -1.320 -1.007 H8 A1DBE 41 A1DBE H9 H18 H 0 1 N N N N N N -45.428 -28.751 2.457 -0.863 0.702 1.001 H9 A1DBE 42 A1DBE H13 H19 H 0 1 N N N N N N -48.053 -28.560 7.744 -6.271 2.011 -0.205 H13 A1DBE 43 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1DBE C16 O1 SING N N 1 A1DBE C16 C17 SING N N 2 A1DBE O1 C14 SING N N 3 A1DBE C17 O2 SING N N 4 A1DBE C14 C15 DOUB Y N 5 A1DBE C14 C13 SING Y N 6 A1DBE C15 N5 SING Y N 7 A1DBE O2 C13 SING N N 8 A1DBE C13 C12 DOUB Y N 9 A1DBE C1 C2 SING N N 10 A1DBE N5 C11 DOUB Y N 11 A1DBE C12 C11 SING Y N 12 A1DBE C3 C2 SING N N 13 A1DBE C11 C4 SING N N 14 A1DBE C2 C4 SING N N 15 A1DBE C4 N1 SING N N 16 A1DBE N1 C5 SING N N 17 A1DBE C5 C8 DOUB Y N 18 A1DBE C5 N2 SING Y N 19 A1DBE C9 C8 SING Y N 20 A1DBE C9 C10 DOUB Y N 21 A1DBE C8 C7 SING Y N 22 A1DBE N2 C6 DOUB Y N 23 A1DBE C10 N4 SING Y N 24 A1DBE C6 N3 SING Y N 25 A1DBE C7 N4 SING Y N 26 A1DBE C7 N3 DOUB Y N 27 A1DBE C3 H6 SING N N 28 A1DBE C3 H7 SING N N 29 A1DBE C3 H5 SING N N 30 A1DBE C6 H10 SING N N 31 A1DBE C9 H11 SING N N 32 A1DBE C12 H14 SING N N 33 A1DBE C17 H18 SING N N 34 A1DBE C17 H19 SING N N 35 A1DBE C1 H2 SING N N 36 A1DBE C1 H1 SING N N 37 A1DBE C1 H3 SING N N 38 A1DBE C10 H12 SING N N 39 A1DBE C15 H15 SING N N 40 A1DBE C16 H16 SING N N 41 A1DBE C16 H17 SING N N 42 A1DBE C2 H4 SING N N 43 A1DBE C4 H8 SING N N 44 A1DBE N1 H9 SING N N 45 A1DBE N4 H13 SING N N 46 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1DBE SMILES ACDLabs 14.52 "CC(C)C(Nc1ncnc2[NH]ccc21)c1ncc2OCCOc2c1" A1DBE InChI InChI 1.06 "InChI=1S/C17H19N5O2/c1-10(2)15(12-7-13-14(8-19-12)24-6-5-23-13)22-17-11-3-4-18-16(11)20-9-21-17/h3-4,7-10,15H,5-6H2,1-2H3,(H2,18,20,21,22)/t15-/m1/s1" A1DBE InChIKey InChI 1.06 PJPHOEMFZKBWQW-OAHLLOKOSA-N A1DBE SMILES_CANONICAL CACTVS 3.385 "CC(C)[C@@H](Nc1ncnc2[nH]ccc12)c3cc4OCCOc4cn3" A1DBE SMILES CACTVS 3.385 "CC(C)[CH](Nc1ncnc2[nH]ccc12)c3cc4OCCOc4cn3" A1DBE SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "CC(C)[C@H](c1cc2c(cn1)OCCO2)Nc3c4cc[nH]c4ncn3" A1DBE SMILES "OpenEye OEToolkits" 3.1.0.0 "CC(C)C(c1cc2c(cn1)OCCO2)Nc3c4cc[nH]c4ncn3" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1DBE "SYSTEMATIC NAME" ACDLabs 14.52 "N-[(1R)-1-(2,3-dihydro[1,4]dioxino[2,3-c]pyridin-7-yl)-2-methylpropyl]-7H-pyrrolo[2,3-d]pyrimidin-4-amine" A1DBE "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "~{N}-[(1~{R})-1-(2,3-dihydro-[1,4]dioxino[2,3-c]pyridin-7-yl)-2-methyl-propyl]-7~{H}-pyrrolo[2,3-d]pyrimidin-4-amine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1DBE "Create component" 2026-03-25 RCSB A1DBE "Initial release" 2026-09-16 RCSB #