data_A1DBM # _chem_comp.id A1DBM _chem_comp.name "N-[(1S)-1-(2,3-dihydro-1,4-benzodioxin-6-yl)-2-methylpropyl]-5-methyl-7H-pyrrolo[2,3-d]pyrimidin-4-amine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C19 H22 N4 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2026-03-27 _chem_comp.pdbx_modified_date 2026-09-11 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 338.404 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1DBM _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 14AN _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? _chem_comp.pdbx_comp_type ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1DBM N2 N1 N 0 1 Y N N N N N -45.362 -29.101 7.028 -4.735 0.937 -1.230 N2 A1DBM 1 A1DBM C3 C1 C 0 1 Y N N N N N -48.725 -28.675 5.869 -4.726 -2.371 0.090 C3 A1DBM 2 A1DBM C6 C2 C 0 1 Y N N N N N -45.537 -29.543 4.266 -2.289 0.319 -0.222 C6 A1DBM 3 A1DBM C9 C3 C 0 1 Y N N N N N -43.029 -27.952 0.991 1.569 -0.765 1.066 C9 A1DBM 4 A1DBM C12 C4 C 0 1 N N N N N N -45.138 -24.325 -1.368 5.918 -1.351 -0.784 C12 A1DBM 5 A1DBM C14 C5 C 0 1 Y N N N N N -45.348 -26.771 -0.087 3.625 0.138 -0.556 C14 A1DBM 6 A1DBM C17 C6 C 0 1 N N N N N N -44.876 -32.332 2.036 1.046 3.003 1.359 C17 A1DBM 7 A1DBM C19 C7 C 0 1 Y N N N N N -46.714 -29.204 4.981 -3.327 -0.624 -0.170 C19 A1DBM 8 A1DBM C1 C8 C 0 1 N N N N N N -48.751 -29.109 3.349 -2.386 -2.813 0.995 C1 A1DBM 9 A1DBM C10 C9 C 0 1 Y N N N N N -42.934 -26.775 0.226 2.793 -1.407 1.084 C10 A1DBM 10 A1DBM C11 C10 C 0 1 Y N N N N N -44.085 -26.185 -0.318 3.826 -0.958 0.275 C11 A1DBM 11 A1DBM C13 C11 C 0 1 N N N N N N -46.353 -25.238 -1.610 5.951 0.161 -1.048 C13 A1DBM 12 A1DBM C15 C12 C 0 1 Y N N N N N -45.444 -27.947 0.670 2.397 0.782 -0.565 C15 A1DBM 13 A1DBM C16 C13 C 0 1 N N N N N N -44.481 -31.113 1.184 -0.072 1.960 1.426 C16 A1DBM 14 A1DBM C18 C14 C 0 1 N N N N N N -43.161 -31.419 0.456 -1.429 2.665 1.405 C18 A1DBM 15 A1DBM C2 C15 C 0 1 Y N N N N N -48.104 -28.991 4.685 -3.461 -1.990 0.332 C2 A1DBM 16 A1DBM C4 C16 C 0 1 Y N N N N N -46.540 -28.999 6.366 -4.582 -0.276 -0.700 C4 A1DBM 17 A1DBM C5 C17 C 0 1 Y N N N N N -44.338 -29.426 6.242 -3.734 1.789 -1.257 C5 A1DBM 18 A1DBM C7 C18 C 0 1 N N S N N N -44.420 -29.821 2.034 0.034 1.022 0.221 C7 A1DBM 19 A1DBM C8 C19 C 0 1 Y N N N N N -44.288 -28.546 1.211 1.371 0.327 0.242 C8 A1DBM 20 A1DBM N1 N2 N 0 1 Y N N N N N -47.780 -28.679 6.878 -5.406 -1.354 -0.527 N1 A1DBM 21 A1DBM N3 N3 N 0 1 Y N N N N N -44.358 -29.649 4.930 -2.539 1.503 -0.772 N3 A1DBM 22 A1DBM N4 N4 N 0 1 N N N N N N -45.595 -29.775 2.891 -1.036 0.023 0.285 N4 A1DBM 23 A1DBM O1 O1 O 0 1 N N N N N N -43.946 -25.030 -1.042 5.027 -1.595 0.310 O1 A1DBM 24 A1DBM O2 O2 O 0 1 N N N N N N -46.501 -26.233 -0.599 4.624 0.593 -1.360 O2 A1DBM 25 A1DBM H4 H1 H 0 1 N N N N N N -49.776 -28.459 5.991 -5.144 -3.334 0.343 H4 A1DBM 26 A1DBM H9 H2 H 0 1 N N N N N N -42.139 -28.399 1.409 0.765 -1.119 1.694 H9 A1DBM 27 A1DBM H12 H3 H 0 1 N N N N N N -44.956 -23.740 -2.282 5.560 -1.871 -1.673 H12 A1DBM 28 A1DBM H11 H4 H 0 1 N N N N N N -45.376 -23.644 -0.538 6.918 -1.702 -0.530 H11 A1DBM 29 A1DBM H17 H5 H 0 1 N N N N N N -45.820 -32.123 2.561 0.950 3.580 0.439 H17 A1DBM 30 A1DBM H19 H6 H 0 1 N N N N N N -45.006 -33.208 1.384 0.971 3.671 2.217 H19 A1DBM 31 A1DBM H18 H7 H 0 1 N N N N N N -44.085 -32.537 2.772 2.013 2.500 1.374 H18 A1DBM 32 A1DBM H1 H8 H 0 1 N N N N N N -49.096 -30.143 3.198 -2.413 -2.647 2.072 H1 A1DBM 33 A1DBM H2 H9 H 0 1 N N N N N N -49.610 -28.424 3.296 -2.557 -3.870 0.786 H2 A1DBM 34 A1DBM H3 H10 H 0 1 N N N N N N -48.025 -28.847 2.566 -1.411 -2.519 0.606 H3 A1DBM 35 A1DBM H10 H11 H 0 1 N N N N N N -41.968 -26.322 0.056 2.945 -2.260 1.730 H10 A1DBM 36 A1DBM H14 H12 H 0 1 N N N N N N -47.261 -24.618 -1.630 6.304 0.682 -0.158 H14 A1DBM 37 A1DBM H13 H13 H 0 1 N N N N N N -46.230 -25.739 -2.582 6.616 0.373 -1.886 H13 A1DBM 38 A1DBM H15 H14 H 0 1 N N N N N N -46.411 -28.398 0.840 2.240 1.635 -1.208 H15 A1DBM 39 A1DBM H16 H15 H 0 1 N N N N N N -45.260 -30.972 0.420 0.024 1.383 2.345 H16 A1DBM 40 A1DBM H20 H16 H 0 1 N N N N N N -43.270 -32.345 -0.128 -2.225 1.923 1.452 H20 A1DBM 41 A1DBM H21 H17 H 0 1 N N N N N N -42.914 -30.587 -0.220 -1.504 3.334 2.263 H21 A1DBM 42 A1DBM H22 H18 H 0 1 N N N N N N -42.355 -31.544 1.195 -1.525 3.243 0.485 H22 A1DBM 43 A1DBM H6 H19 H 0 1 N N N N N N -43.377 -29.520 6.726 -3.896 2.763 -1.695 H6 A1DBM 44 A1DBM H8 H20 H 0 1 N N N N N N -43.528 -29.895 2.674 -0.062 1.599 -0.698 H8 A1DBM 45 A1DBM H5 H21 H 0 1 N N N N N N -47.968 -28.479 7.840 -6.336 -1.393 -0.802 H5 A1DBM 46 A1DBM H7 H22 H 0 1 N N N N N N -46.178 -29.054 2.517 -0.867 -0.845 0.683 H7 A1DBM 47 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1DBM C13 C12 SING N N 1 A1DBM C13 O2 SING N N 2 A1DBM C12 O1 SING N N 3 A1DBM O1 C11 SING N N 4 A1DBM O2 C14 SING N N 5 A1DBM C11 C14 DOUB Y N 6 A1DBM C11 C10 SING Y N 7 A1DBM C14 C15 SING Y N 8 A1DBM C10 C9 DOUB Y N 9 A1DBM C18 C16 SING N N 10 A1DBM C15 C8 DOUB Y N 11 A1DBM C9 C8 SING Y N 12 A1DBM C16 C7 SING N N 13 A1DBM C16 C17 SING N N 14 A1DBM C8 C7 SING N N 15 A1DBM C7 N4 SING N N 16 A1DBM N4 C6 SING N N 17 A1DBM C1 C2 SING N N 18 A1DBM C6 N3 DOUB Y N 19 A1DBM C6 C19 SING Y N 20 A1DBM C2 C19 SING Y N 21 A1DBM C2 C3 DOUB Y N 22 A1DBM N3 C5 SING Y N 23 A1DBM C19 C4 DOUB Y N 24 A1DBM C3 N1 SING Y N 25 A1DBM C5 N2 DOUB Y N 26 A1DBM C4 N1 SING Y N 27 A1DBM C4 N2 SING Y N 28 A1DBM C3 H4 SING N N 29 A1DBM C9 H9 SING N N 30 A1DBM C12 H12 SING N N 31 A1DBM C12 H11 SING N N 32 A1DBM C17 H17 SING N N 33 A1DBM C17 H19 SING N N 34 A1DBM C17 H18 SING N N 35 A1DBM C1 H1 SING N N 36 A1DBM C1 H2 SING N N 37 A1DBM C1 H3 SING N N 38 A1DBM C10 H10 SING N N 39 A1DBM C13 H14 SING N N 40 A1DBM C13 H13 SING N N 41 A1DBM C15 H15 SING N N 42 A1DBM C16 H16 SING N N 43 A1DBM C18 H20 SING N N 44 A1DBM C18 H21 SING N N 45 A1DBM C18 H22 SING N N 46 A1DBM C5 H6 SING N N 47 A1DBM C7 H8 SING N N 48 A1DBM N1 H5 SING N N 49 A1DBM N4 H7 SING N N 50 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1DBM SMILES ACDLabs 14.52 "CC(C)C(Nc1ncnc2[NH]cc(C)c21)c1ccc2OCCOc2c1" A1DBM InChI InChI 1.06 "InChI=1S/C19H22N4O2/c1-11(2)17(13-4-5-14-15(8-13)25-7-6-24-14)23-19-16-12(3)9-20-18(16)21-10-22-19/h4-5,8-11,17H,6-7H2,1-3H3,(H2,20,21,22,23)/t17-/m0/s1" A1DBM InChIKey InChI 1.06 BYNUDIRHVCYYKC-KRWDZBQOSA-N A1DBM SMILES_CANONICAL CACTVS 3.385 "CC(C)[C@H](Nc1ncnc2[nH]cc(C)c12)c3ccc4OCCOc4c3" A1DBM SMILES CACTVS 3.385 "CC(C)[CH](Nc1ncnc2[nH]cc(C)c12)c3ccc4OCCOc4c3" A1DBM SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "Cc1c[nH]c2c1c(ncn2)N[C@H](c3ccc4c(c3)OCCO4)C(C)C" A1DBM SMILES "OpenEye OEToolkits" 3.1.0.0 "Cc1c[nH]c2c1c(ncn2)NC(c3ccc4c(c3)OCCO4)C(C)C" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1DBM "SYSTEMATIC NAME" ACDLabs 14.52 "N-[(1S)-1-(2,3-dihydro-1,4-benzodioxin-6-yl)-2-methylpropyl]-5-methyl-7H-pyrrolo[2,3-d]pyrimidin-4-amine" A1DBM "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "~{N}-[(1~{S})-1-(2,3-dihydro-1,4-benzodioxin-6-yl)-2-methyl-propyl]-5-methyl-7~{H}-pyrrolo[2,3-d]pyrimidin-4-amine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1DBM "Create component" 2026-03-27 RCSB A1DBM "Initial release" 2026-09-16 RCSB #