data_A1DBU # _chem_comp.id A1DBU _chem_comp.name "(3R)-3-(3-chlorophenyl)-3-[(7H-pyrrolo[2,3-d]pyrimidine-4-carbonyl)amino]propanoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C16 H13 Cl N4 O3" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2026-03-30 _chem_comp.pdbx_modified_date 2026-09-11 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 344.752 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1DBU _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 14AF _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1DBU N2 N1 N 0 1 Y N N N N N -44.642 -29.302 5.328 -2.233 0.274 -1.579 N2 A1DBU 1 A1DBU C3 C1 C 0 1 N N R N N N -44.363 -29.821 1.271 1.367 1.294 0.542 C3 A1DBU 2 A1DBU C6 C2 C 0 1 Y N N N N N -44.624 -29.189 6.651 -3.344 -0.002 -2.232 C6 A1DBU 3 A1DBU C9 C3 C 0 1 Y N N N N N -48.459 -29.091 5.146 -3.468 -1.047 1.735 C9 A1DBU 4 A1DBU C12 C4 C 0 1 Y N N N N N -43.087 -27.672 0.780 2.989 -0.091 1.851 C12 A1DBU 5 A1DBU C14 C5 C 0 1 Y N N N N N -44.189 -25.836 -0.360 4.038 -2.021 0.897 C14 A1DBU 6 A1DBU C1 C6 C 0 1 N N N N N N -43.281 -31.895 2.137 1.176 3.649 -0.212 C1 A1DBU 7 A1DBU C10 C7 C 0 1 Y N N N N N -49.061 -28.937 6.372 -4.718 -1.545 1.742 C10 A1DBU 8 A1DBU C11 C8 C 0 1 Y N N N N N -44.263 -28.439 0.683 2.308 0.124 0.667 C11 A1DBU 9 A1DBU C13 C9 C 0 1 Y N N N N N -43.049 -26.373 0.249 3.856 -1.162 1.965 C13 A1DBU 10 A1DBU C15 C10 C 0 1 Y N N N N N -45.360 -26.600 -0.423 3.353 -1.809 -0.285 C15 A1DBU 11 A1DBU C16 C11 C 0 1 Y N N N N N -45.412 -27.893 0.101 2.489 -0.734 -0.401 C16 A1DBU 12 A1DBU C2 C12 C 0 1 N N N N N N -43.171 -30.778 1.098 2.065 2.432 -0.205 C2 A1DBU 13 A1DBU C4 C13 C 0 1 N N N N N N -45.819 -29.477 3.195 -0.860 0.310 0.447 C4 A1DBU 14 A1DBU C5 C14 C 0 1 Y N N N N N -45.832 -29.283 4.670 -2.111 -0.003 -0.282 C5 A1DBU 15 A1DBU C7 C15 C 0 1 Y N N N N N -46.853 -29.031 6.797 -4.369 -0.876 -0.371 C7 A1DBU 16 A1DBU C8 C16 C 0 1 Y N N N N N -47.037 -29.145 5.399 -3.198 -0.599 0.374 C8 A1DBU 17 A1DBU N1 N2 N 0 1 N N N N N N -44.594 -29.594 2.680 0.173 0.883 -0.201 N1 A1DBU 18 A1DBU N3 N3 N 0 1 Y N N N N N -45.673 -29.051 7.457 -4.390 -0.561 -1.658 N3 A1DBU 19 A1DBU N4 N4 N 0 1 Y N N N N N -48.095 -28.902 7.364 -5.266 -1.448 0.492 N4 A1DBU 20 A1DBU O1 O1 O 0 1 N N N N N N -42.588 -31.803 3.168 1.536 4.740 -0.906 O1 A1DBU 21 A1DBU O2 O2 O 0 1 N N N N N N -46.853 -29.592 2.531 -0.766 0.051 1.631 O2 A1DBU 22 A1DBU O3 O3 O 0 1 N N N N N N -44.089 -32.808 1.881 0.138 3.642 0.406 O3 A1DBU 23 A1DBU CL1 CL1 CL 0 0 N N N N N N -46.772 -25.964 -1.147 3.581 -2.888 -1.626 CL1 A1DBU 24 A1DBU H3 H1 H 0 1 N N N N N N -45.249 -30.311 0.841 1.077 1.635 1.535 H3 A1DBU 25 A1DBU H5 H2 H 0 1 N N N N N N -43.653 -29.212 7.123 -3.399 0.240 -3.283 H5 A1DBU 26 A1DBU H6 H3 H 0 1 N N N N N N -48.950 -29.158 4.186 -2.793 -0.990 2.577 H6 A1DBU 27 A1DBU H9 H4 H 0 1 N N N N N N -42.213 -28.083 1.263 2.847 0.580 2.685 H9 A1DBU 28 A1DBU H11 H5 H 0 1 N N N N N N -44.165 -24.840 -0.778 4.716 -2.857 0.987 H11 A1DBU 29 A1DBU H7 H6 H 0 1 N N N N N N -50.125 -28.856 6.537 -5.215 -1.959 2.606 H7 A1DBU 30 A1DBU H10 H7 H 0 1 N N N N N N -42.142 -25.789 0.310 4.391 -1.327 2.888 H10 A1DBU 31 A1DBU H12 H8 H 0 1 N N N N N N -46.327 -28.464 0.058 1.953 -0.569 -1.324 H12 A1DBU 32 A1DBU H2 H9 H 0 1 N N N N N N -43.188 -31.211 0.087 3.004 2.672 0.295 H2 A1DBU 33 A1DBU H1 H10 H 0 1 N N N N N N -42.230 -30.227 1.245 2.268 2.124 -1.230 H1 A1DBU 34 A1DBU H4 H11 H 0 1 N N N N N N -43.806 -29.522 3.291 0.126 1.024 -1.160 H4 A1DBU 35 A1DBU H8 H12 H 0 1 N N N N N N -48.275 -28.799 8.342 -6.159 -1.742 0.252 H8 A1DBU 36 A1DBU H13 H13 H 0 1 N N N N N N -42.768 -32.541 3.738 0.933 5.495 -0.880 H13 A1DBU 37 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1DBU CL1 C15 SING N N 1 A1DBU C15 C14 DOUB Y N 2 A1DBU C15 C16 SING Y N 3 A1DBU C14 C13 SING Y N 4 A1DBU C16 C11 DOUB Y N 5 A1DBU C13 C12 DOUB Y N 6 A1DBU C11 C12 SING Y N 7 A1DBU C11 C3 SING N N 8 A1DBU C2 C3 SING N N 9 A1DBU C2 C1 SING N N 10 A1DBU C3 N1 SING N N 11 A1DBU O3 C1 DOUB N N 12 A1DBU C1 O1 SING N N 13 A1DBU O2 C4 DOUB N N 14 A1DBU N1 C4 SING N N 15 A1DBU C4 C5 SING N N 16 A1DBU C5 N2 DOUB Y N 17 A1DBU C5 C8 SING Y N 18 A1DBU C9 C8 SING Y N 19 A1DBU C9 C10 DOUB Y N 20 A1DBU N2 C6 SING Y N 21 A1DBU C8 C7 DOUB Y N 22 A1DBU C10 N4 SING Y N 23 A1DBU C6 N3 DOUB Y N 24 A1DBU C7 N4 SING Y N 25 A1DBU C7 N3 SING Y N 26 A1DBU C3 H3 SING N N 27 A1DBU C6 H5 SING N N 28 A1DBU C9 H6 SING N N 29 A1DBU C12 H9 SING N N 30 A1DBU C14 H11 SING N N 31 A1DBU C10 H7 SING N N 32 A1DBU C13 H10 SING N N 33 A1DBU C16 H12 SING N N 34 A1DBU C2 H2 SING N N 35 A1DBU C2 H1 SING N N 36 A1DBU N1 H4 SING N N 37 A1DBU N4 H8 SING N N 38 A1DBU O1 H13 SING N N 39 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1DBU SMILES ACDLabs 14.52 "Clc1cccc(c1)C(CC(=O)O)NC(=O)c1ncnc2[NH]ccc12" A1DBU InChI InChI 1.06 "InChI=1S/C16H13ClN4O3/c17-10-3-1-2-9(6-10)12(7-13(22)23)21-16(24)14-11-4-5-18-15(11)20-8-19-14/h1-6,8,12H,7H2,(H,21,24)(H,22,23)(H,18,19,20)/t12-/m1/s1" A1DBU InChIKey InChI 1.06 CWLLZKUWCFZUGJ-GFCCVEGCSA-N A1DBU SMILES_CANONICAL CACTVS 3.385 "OC(=O)C[C@@H](NC(=O)c1ncnc2[nH]ccc12)c3cccc(Cl)c3" A1DBU SMILES CACTVS 3.385 "OC(=O)C[CH](NC(=O)c1ncnc2[nH]ccc12)c3cccc(Cl)c3" A1DBU SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1cc(cc(c1)Cl)[C@@H](CC(=O)O)NC(=O)c2c3cc[nH]c3ncn2" A1DBU SMILES "OpenEye OEToolkits" 3.1.0.0 "c1cc(cc(c1)Cl)C(CC(=O)O)NC(=O)c2c3cc[nH]c3ncn2" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1DBU "SYSTEMATIC NAME" ACDLabs 14.52 "(3R)-3-(3-chlorophenyl)-3-[(7H-pyrrolo[2,3-d]pyrimidine-4-carbonyl)amino]propanoic acid" A1DBU "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "(3~{R})-3-(3-chlorophenyl)-3-(7~{H}-pyrrolo[2,3-d]pyrimidin-4-ylcarbonylamino)propanoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1DBU "Create component" 2026-03-30 RCSB A1DBU "Initial release" 2026-09-16 RCSB #