data_A1DFK # _chem_comp.id A1DFK _chem_comp.name "(3M)-3-{(2M,8S)-2-[3-(benzamidomethyl)phenyl]-3-ethyl-7-oxo-4,7-dihydropyrazolo[1,5-a]pyrimidin-5-yl}benzoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C29 H24 N4 O4" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2026-05-05 _chem_comp.pdbx_modified_date 2026-07-31 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 492.525 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1DFK _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 13EB _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1DFK C1 C1 C 0 1 N N N N N N 11.048 13.607 13.510 0.199 0.160 2.922 C1 A1DFK 1 A1DFK C10 C2 C 0 1 N N N N N N 15.498 18.196 8.024 5.130 1.433 -1.179 C10 A1DFK 2 A1DFK C11 C3 C 0 1 N N N N N N 15.073 20.544 8.612 6.727 -0.397 -0.989 C11 A1DFK 3 A1DFK C12 C4 C 0 1 Y N N N N N 14.221 21.223 9.644 7.291 -1.559 -0.268 C12 A1DFK 4 A1DFK C13 C5 C 0 1 Y N N N N N 14.222 20.795 10.966 8.367 -2.264 -0.808 C13 A1DFK 5 A1DFK C14 C6 C 0 1 Y N N N N N 13.412 21.418 11.901 8.888 -3.347 -0.131 C14 A1DFK 6 A1DFK C15 C7 C 0 1 Y N N N N N 12.575 22.441 11.511 8.345 -3.735 1.081 C15 A1DFK 7 A1DFK C16 C8 C 0 1 Y N N N N N 12.547 22.851 10.191 7.277 -3.041 1.621 C16 A1DFK 8 A1DFK C17 C9 C 0 1 Y N N N N N 13.359 22.243 9.251 6.751 -1.952 0.957 C17 A1DFK 9 A1DFK C18 C10 C 0 1 Y N N N N N 14.437 17.095 10.010 2.700 1.556 -0.603 C18 A1DFK 10 A1DFK C19 C11 C 0 1 N N N N N N 14.047 17.829 15.073 -2.582 0.555 -1.905 C19 A1DFK 11 A1DFK C2 C12 C 0 1 N N N N N N 11.355 14.635 12.433 -0.467 1.433 2.395 C2 A1DFK 12 A1DFK C20 C13 C 0 1 N N N N N N 13.373 17.719 16.266 -3.828 0.133 -1.411 C20 A1DFK 13 A1DFK C21 C14 C 0 1 N N N N N N 12.296 16.863 16.365 -4.047 0.102 -0.063 C21 A1DFK 14 A1DFK C22 C15 C 0 1 Y N N N N N 11.580 16.751 17.657 -5.354 -0.340 0.467 C22 A1DFK 15 A1DFK C23 C16 C 0 1 Y N N N N N 10.793 15.637 17.929 -5.576 -0.371 1.846 C23 A1DFK 16 A1DFK C24 C17 C 0 1 Y N N N N N 10.132 15.535 19.137 -6.797 -0.784 2.342 C24 A1DFK 17 A1DFK C25 C18 C 0 1 Y N N N N N 10.241 16.539 20.083 -7.805 -1.169 1.482 C25 A1DFK 18 A1DFK C26 C19 C 0 1 Y N N N N N 11.012 17.663 19.821 -7.596 -1.143 0.100 C26 A1DFK 19 A1DFK C27 C20 C 0 1 N N N N N N 11.136 18.757 20.831 -8.676 -1.556 -0.820 C27 A1DFK 20 A1DFK C28 C21 C 0 1 Y N N N N N 11.686 17.764 18.604 -6.369 -0.722 -0.408 C28 A1DFK 21 A1DFK C29 C22 C 0 1 Y N N N N N 12.545 16.232 14.115 -1.825 0.891 0.296 C29 A1DFK 22 A1DFK C3 C23 C 0 1 Y N N N N N 12.400 15.634 12.842 -0.683 1.308 0.908 C3 A1DFK 23 A1DFK C4 C24 C 0 1 Y N N N N N 13.420 16.198 12.064 0.259 1.602 -0.093 C4 A1DFK 24 A1DFK C5 C25 C 0 1 Y N N N N N 13.838 16.025 10.664 1.643 2.089 0.132 C5 A1DFK 25 A1DFK C6 C26 C 0 1 Y N N N N N 13.635 14.839 9.962 1.889 3.082 1.078 C6 A1DFK 26 A1DFK C7 C27 C 0 1 Y N N N N N 14.044 14.732 8.644 3.178 3.532 1.283 C7 A1DFK 27 A1DFK C8 C28 C 0 1 Y N N N N N 14.649 15.805 8.008 4.224 2.999 0.551 C8 A1DFK 28 A1DFK C9 C29 C 0 1 Y N N N N N 14.848 17.006 8.688 3.985 2.009 -0.386 C9 A1DFK 29 A1DFK N1 N1 N 0 1 N N N N N N 15.547 19.338 8.929 5.688 0.282 -0.465 N1 A1DFK 30 A1DFK N2 N2 N 0 1 Y N N N N N 14.162 17.065 12.782 -0.296 1.370 -1.265 N2 A1DFK 31 A1DFK N3 N3 N 0 1 Y N N N N N 13.608 17.073 14.013 -1.607 0.922 -1.051 N3 A1DFK 32 A1DFK N4 N4 N 0 1 N N N N N N 11.888 16.124 15.298 -3.048 0.484 0.797 N4 A1DFK 33 A1DFK O1 O1 O 0 1 N N N N N N 15.306 21.068 7.527 7.202 -0.054 -2.054 O1 A1DFK 34 A1DFK O2 O2 O 0 1 N N N N N N 15.017 18.566 14.955 -2.382 0.584 -3.107 O2 A1DFK 35 A1DFK O3 O3 O 0 1 N N N N N N 11.638 19.840 20.466 -8.493 -1.533 -2.020 O3 A1DFK 36 A1DFK O4 O4 O 0 1 N N N N N N 10.730 18.527 21.977 -9.864 -1.958 -0.327 O4 A1DFK 37 A1DFK H1 H1 H 0 1 N N N N N N 10.279 12.911 13.145 -0.436 -0.698 2.704 H1 A1DFK 38 A1DFK H2 H2 H 0 1 N N N N N N 11.963 13.047 13.754 1.166 0.029 2.437 H2 A1DFK 39 A1DFK H3 H3 H 0 1 N N N N N N 10.681 14.119 14.411 0.341 0.244 3.999 H3 A1DFK 40 A1DFK H10 H4 H 0 1 N N N N N N 16.523 17.927 7.728 4.770 1.114 -2.157 H10 A1DFK 41 A1DFK H9 H5 H 0 1 N N N N N N 14.918 18.470 7.130 5.902 2.191 -1.305 H9 A1DFK 42 A1DFK H12 H6 H 0 1 N N N N N N 14.856 19.974 11.265 8.792 -1.962 -1.755 H12 A1DFK 43 A1DFK H13 H7 H 0 1 N N N N N N 13.436 21.103 12.934 9.721 -3.893 -0.548 H13 A1DFK 44 A1DFK H14 H8 H 0 1 N N N N N N 11.939 22.924 12.238 8.756 -4.584 1.607 H14 A1DFK 45 A1DFK H15 H9 H 0 1 N N N N N N 11.887 23.651 9.892 6.858 -3.349 2.568 H15 A1DFK 46 A1DFK H16 H10 H 0 1 N N N N N N 13.325 22.558 8.218 5.921 -1.408 1.383 H16 A1DFK 47 A1DFK H17 H11 H 0 1 N N N N N N 14.587 18.021 10.545 2.514 0.786 -1.337 H17 A1DFK 48 A1DFK H4 H12 H 0 1 N N N N N N 11.711 14.105 11.537 -1.427 1.573 2.891 H4 A1DFK 49 A1DFK H5 H13 H 0 1 N N N N N N 10.428 15.178 12.195 0.176 2.290 2.598 H5 A1DFK 50 A1DFK H18 H14 H 0 1 N N N N N N 13.685 18.300 17.121 -4.609 -0.165 -2.095 H18 A1DFK 51 A1DFK H19 H15 H 0 1 N N N N N N 10.699 14.851 17.195 -4.792 -0.071 2.525 H19 A1DFK 52 A1DFK H20 H16 H 0 1 N N N N N N 9.526 14.666 19.345 -6.963 -0.806 3.409 H20 A1DFK 53 A1DFK H21 H17 H 0 1 N N N N N N 9.725 16.448 21.027 -8.757 -1.492 1.877 H21 A1DFK 54 A1DFK H22 H18 H 0 1 N N N N N N 12.293 18.633 18.396 -6.204 -0.695 -1.475 H22 A1DFK 55 A1DFK H6 H19 H 0 1 N N N N N N 13.157 14.001 10.447 1.073 3.499 1.649 H6 A1DFK 56 A1DFK H7 H20 H 0 1 N N N N N N 13.891 13.807 8.108 3.370 4.301 2.016 H7 A1DFK 57 A1DFK H8 H21 H 0 1 N N N N N N 14.968 15.710 6.981 5.230 3.353 0.715 H8 A1DFK 58 A1DFK H11 H22 H 0 1 N N N N N N 15.956 19.211 9.832 5.309 0.008 0.385 H11 A1DFK 59 A1DFK H23 H23 H 0 1 N N N N N N 11.108 15.504 15.385 -3.199 0.464 1.755 H23 A1DFK 60 A1DFK H24 H24 H 0 1 N N N N N N 10.861 19.295 22.520 -10.540 -2.219 -0.968 H24 A1DFK 61 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1DFK C1 C2 SING N N 1 A1DFK C2 C3 SING N N 2 A1DFK C3 C4 SING Y N 3 A1DFK C4 C5 SING N N 4 A1DFK C5 C6 DOUB Y N 5 A1DFK C6 C7 SING Y N 6 A1DFK C7 C8 DOUB Y N 7 A1DFK C8 C9 SING Y N 8 A1DFK C9 C10 SING N N 9 A1DFK C10 N1 SING N N 10 A1DFK N1 C11 SING N N 11 A1DFK C11 O1 DOUB N N 12 A1DFK C11 C12 SING N N 13 A1DFK C12 C13 DOUB Y N 14 A1DFK C13 C14 SING Y N 15 A1DFK C14 C15 DOUB Y N 16 A1DFK C15 C16 SING Y N 17 A1DFK C16 C17 DOUB Y N 18 A1DFK C9 C18 DOUB Y N 19 A1DFK C4 N2 DOUB Y N 20 A1DFK N2 N3 SING Y N 21 A1DFK N3 C19 SING N N 22 A1DFK C19 O2 DOUB N N 23 A1DFK C19 C20 SING N N 24 A1DFK C20 C21 DOUB N N 25 A1DFK C21 C22 SING N N 26 A1DFK C22 C23 DOUB Y N 27 A1DFK C23 C24 SING Y N 28 A1DFK C24 C25 DOUB Y N 29 A1DFK C25 C26 SING Y N 30 A1DFK C26 C27 SING N N 31 A1DFK C27 O3 DOUB N N 32 A1DFK C27 O4 SING N N 33 A1DFK C26 C28 DOUB Y N 34 A1DFK C21 N4 SING N N 35 A1DFK N4 C29 SING N N 36 A1DFK C12 C17 SING Y N 37 A1DFK C5 C18 SING Y N 38 A1DFK C22 C28 SING Y N 39 A1DFK C3 C29 DOUB Y N 40 A1DFK N3 C29 SING Y N 41 A1DFK C1 H1 SING N N 42 A1DFK C1 H2 SING N N 43 A1DFK C1 H3 SING N N 44 A1DFK C10 H10 SING N N 45 A1DFK C10 H9 SING N N 46 A1DFK C13 H12 SING N N 47 A1DFK C14 H13 SING N N 48 A1DFK C15 H14 SING N N 49 A1DFK C16 H15 SING N N 50 A1DFK C17 H16 SING N N 51 A1DFK C18 H17 SING N N 52 A1DFK C2 H4 SING N N 53 A1DFK C2 H5 SING N N 54 A1DFK C20 H18 SING N N 55 A1DFK C23 H19 SING N N 56 A1DFK C24 H20 SING N N 57 A1DFK C25 H21 SING N N 58 A1DFK C28 H22 SING N N 59 A1DFK C6 H6 SING N N 60 A1DFK C7 H7 SING N N 61 A1DFK C8 H8 SING N N 62 A1DFK N1 H11 SING N N 63 A1DFK N4 H23 SING N N 64 A1DFK O4 H24 SING N N 65 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1DFK SMILES ACDLabs 14.52 "O=C(O)c1cccc(c1)C1=CC(=O)n2nc(c(CC)c2N1)c1cccc(CNC(=O)c2ccccc2)c1" A1DFK InChI InChI 1.06 "InChI=1S/C29H24N4O4/c1-2-23-26(21-12-6-8-18(14-21)17-30-28(35)19-9-4-3-5-10-19)32-33-25(34)16-24(31-27(23)33)20-11-7-13-22(15-20)29(36)37/h3-16,31H,2,17H2,1H3,(H,30,35)(H,36,37)" A1DFK InChIKey InChI 1.06 ZRRLKONOHCGZNK-UHFFFAOYSA-N A1DFK SMILES_CANONICAL CACTVS 3.385 "CCc1c2NC(=CC(=O)n2nc1c3cccc(CNC(=O)c4ccccc4)c3)c5cccc(c5)C(O)=O" A1DFK SMILES CACTVS 3.385 "CCc1c2NC(=CC(=O)n2nc1c3cccc(CNC(=O)c4ccccc4)c3)c5cccc(c5)C(O)=O" A1DFK SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "CCc1c(nn2c1NC(=CC2=O)c3cccc(c3)C(=O)O)c4cccc(c4)CNC(=O)c5ccccc5" A1DFK SMILES "OpenEye OEToolkits" 3.1.0.0 "CCc1c(nn2c1NC(=CC2=O)c3cccc(c3)C(=O)O)c4cccc(c4)CNC(=O)c5ccccc5" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1DFK "SYSTEMATIC NAME" ACDLabs 14.52 "(3M)-3-{(2M,8S)-2-[3-(benzamidomethyl)phenyl]-3-ethyl-7-oxo-4,7-dihydropyrazolo[1,5-a]pyrimidin-5-yl}benzoic acid" A1DFK "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "3-[2-[3-(benzamidomethyl)phenyl]-3-ethyl-7-oxidanylidene-4~{H}-pyrazolo[1,5-a]pyrimidin-5-yl]benzoic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1DFK "Create component" 2026-05-05 RCSB A1DFK "Initial release" 2026-08-05 RCSB #