data_A1DNH # _chem_comp.id A1DNH _chem_comp.name prexasertib _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C18 H19 N7 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms "5-({(5P)-5-[2-(3-aminopropoxy)-6-methoxyphenyl]-1H-pyrazol-3-yl}amino)pyrazine-2-carbonitrile" _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2026-07-21 _chem_comp.pdbx_modified_date 2026-07-31 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 365.389 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1DNH _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 35WF _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1DNH N1 N1 N 0 1 Y N N N N N 8.600 9.254 17.497 5.450 1.690 0.209 N1 A1DNH 1 A1DNH N3 N2 N 0 1 N N N N N N 10.302 6.902 15.623 7.153 -0.307 2.425 N3 A1DNH 2 A1DNH C4 C1 C 0 1 Y N N N N N 7.199 7.351 17.290 4.042 -0.086 0.877 C4 A1DNH 3 A1DNH C5 C2 C 0 1 N N N N N N 9.409 7.362 16.232 6.317 0.088 1.765 C5 A1DNH 4 A1DNH C6 C3 C 0 1 Y N N N N N 4.255 9.433 19.467 0.977 1.351 -1.387 C6 A1DNH 5 A1DNH C7 C4 C 0 1 Y N N N N N 3.518 8.286 19.129 0.643 0.188 -0.681 C7 A1DNH 6 A1DNH C8 C5 C 0 1 Y N N N N N 2.223 8.509 19.500 -0.677 -0.077 -0.914 C8 A1DNH 7 A1DNH C10 C6 C 0 1 Y N N N N N 1.026 6.495 18.647 -2.731 -1.001 0.160 C10 A1DNH 8 A1DNH C13 C7 C 0 1 Y N N N N N -1.381 7.236 19.910 -1.643 -3.559 0.141 C13 A1DNH 9 A1DNH C15 C8 C 0 1 N N N N N N -1.503 9.530 21.321 0.820 -4.059 -0.854 C15 A1DNH 10 A1DNH C17 C9 C 0 1 N N N N N N 3.731 4.873 16.813 -5.004 1.854 0.661 C17 A1DNH 11 A1DNH C1 C10 C 0 1 Y N N N N N 8.404 8.008 16.977 5.264 0.586 0.932 C1 A1DNH 12 A1DNH C2 C11 C 0 1 Y N N N N N 7.663 9.805 18.233 4.482 2.146 -0.556 C2 A1DNH 13 A1DNH C3 C12 C 0 1 Y N N N N N 6.510 9.143 18.516 3.258 1.474 -0.611 C3 A1DNH 14 A1DNH N2 N3 N 0 1 Y N N N N N 6.284 7.933 18.051 3.071 0.374 0.109 N2 A1DNH 15 A1DNH N4 N4 N 0 1 N N N N N N 5.584 9.768 19.302 2.239 1.956 -1.417 N4 A1DNH 16 A1DNH N5 N5 N 0 1 Y N N N N N 2.220 9.751 19.993 -1.149 0.897 -1.742 N5 A1DNH 17 A1DNH N6 N6 N 0 1 Y N N N N N 3.434 10.290 20.015 -0.093 1.774 -2.020 N6 A1DNH 18 A1DNH C9 C13 C 0 1 Y N N N N N 0.998 7.672 19.374 -1.452 -1.211 -0.367 C9 A1DNH 19 A1DNH C11 C14 C 0 1 Y N N N N N -0.127 5.694 18.563 -3.450 -2.070 0.670 C11 A1DNH 20 A1DNH C12 C15 C 0 1 Y N N N N N -1.305 6.051 19.183 -2.906 -3.342 0.660 C12 A1DNH 21 A1DNH C14 C16 C 0 1 Y N N N N N -0.229 7.994 20.024 -0.910 -2.501 -0.373 C14 A1DNH 22 A1DNH O1 O1 O 0 1 N N N N N N -0.263 9.155 20.727 0.331 -2.716 -0.881 O1 A1DNH 23 A1DNH O2 O2 O 0 1 N N N N N N 2.178 6.143 18.050 -3.264 0.248 0.176 O2 A1DNH 24 A1DNH C16 C17 C 0 1 N N N N N N 2.286 4.986 17.240 -4.575 0.387 0.729 C16 A1DNH 25 A1DNH C18 C18 C 0 1 N N N N N N 4.045 5.977 15.799 -6.407 2.002 1.252 C18 A1DNH 26 A1DNH N7 N7 N 0 1 N N N N N N 3.415 5.755 14.456 -6.820 3.411 1.187 N7 A1DNH 27 A1DNH H1 H1 H 0 1 N N N N N N 7.018 6.359 16.904 3.889 -0.980 1.463 H1 A1DNH 28 A1DNH H2 H2 H 0 1 N N N N N N 3.904 7.392 18.662 1.310 -0.396 -0.064 H2 A1DNH 29 A1DNH H3 H3 H 0 1 N N N N N N -2.306 7.552 20.369 -1.226 -4.555 0.138 H3 A1DNH 30 A1DNH H4 H4 H 0 1 N N N N N N -1.381 10.484 21.854 1.819 -4.091 -1.288 H4 A1DNH 31 A1DNH H5 H5 H 0 1 N N N N N N -2.266 9.643 20.537 0.861 -4.410 0.178 H5 A1DNH 32 A1DNH H6 H6 H 0 1 N N N N N N -1.820 8.752 22.031 0.153 -4.700 -1.429 H6 A1DNH 33 A1DNH H7 H7 H 0 1 N N N N N N 3.902 3.890 16.351 -4.303 2.464 1.230 H7 A1DNH 34 A1DNH H8 H8 H 0 1 N N N N N N 4.384 4.984 17.691 -5.011 2.182 -0.379 H8 A1DNH 35 A1DNH H9 H9 H 0 1 N N N N N N 7.811 10.802 18.621 4.634 3.041 -1.141 H9 A1DNH 36 A1DNH H10 H10 H 0 1 N N N N N N 5.907 10.561 19.818 2.400 2.713 -2.003 H10 A1DNH 37 A1DNH H11 H11 H 0 1 N N N N N N 1.397 10.222 20.310 -2.056 0.970 -2.080 H11 A1DNH 38 A1DNH H12 H12 H 0 1 N N N N N N -0.088 4.775 17.998 -4.437 -1.910 1.076 H12 A1DNH 39 A1DNH H13 H13 H 0 1 N N N N N N -2.171 5.410 19.105 -3.472 -4.170 1.059 H13 A1DNH 40 A1DNH H14 H14 H 0 1 N N N N N N 1.638 5.083 16.356 -4.568 0.058 1.768 H14 A1DNH 41 A1DNH H15 H15 H 0 1 N N N N N N 1.992 4.095 17.814 -5.276 -0.224 0.159 H15 A1DNH 42 A1DNH H16 H16 H 0 1 N N N N N N 5.136 6.028 15.667 -7.108 1.392 0.683 H16 A1DNH 43 A1DNH H17 H17 H 0 1 N N N N N N 3.679 6.933 16.201 -6.400 1.673 2.291 H17 A1DNH 44 A1DNH H18 H18 H 0 1 N N N N N N 3.658 6.508 13.845 -6.772 3.758 0.241 H18 A1DNH 45 A1DNH H19 H19 H 0 1 N N N N N N 3.745 4.893 14.071 -7.744 3.535 1.572 H19 A1DNH 46 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1DNH N7 C18 SING N N 1 A1DNH N3 C5 TRIP N N 2 A1DNH C18 C17 SING N N 3 A1DNH C5 C1 SING N N 4 A1DNH C17 C16 SING N N 5 A1DNH C1 C4 DOUB Y N 6 A1DNH C1 N1 SING Y N 7 A1DNH C16 O2 SING N N 8 A1DNH C4 N2 SING Y N 9 A1DNH N1 C2 DOUB Y N 10 A1DNH O2 C10 SING N N 11 A1DNH N2 C3 DOUB Y N 12 A1DNH C2 C3 SING Y N 13 A1DNH C3 N4 SING N N 14 A1DNH C11 C10 DOUB Y N 15 A1DNH C11 C12 SING Y N 16 A1DNH C10 C9 SING Y N 17 A1DNH C7 C6 SING Y N 18 A1DNH C7 C8 DOUB Y N 19 A1DNH C12 C13 DOUB Y N 20 A1DNH N4 C6 SING N N 21 A1DNH C9 C8 SING N N 22 A1DNH C9 C14 DOUB Y N 23 A1DNH C6 N6 DOUB Y N 24 A1DNH C8 N5 SING Y N 25 A1DNH C13 C14 SING Y N 26 A1DNH N5 N6 SING Y N 27 A1DNH C14 O1 SING N N 28 A1DNH O1 C15 SING N N 29 A1DNH C4 H1 SING N N 30 A1DNH C7 H2 SING N N 31 A1DNH C13 H3 SING N N 32 A1DNH C15 H4 SING N N 33 A1DNH C15 H5 SING N N 34 A1DNH C15 H6 SING N N 35 A1DNH C17 H7 SING N N 36 A1DNH C17 H8 SING N N 37 A1DNH C2 H9 SING N N 38 A1DNH N4 H10 SING N N 39 A1DNH N5 H11 SING N N 40 A1DNH C11 H12 SING N N 41 A1DNH C12 H13 SING N N 42 A1DNH C16 H14 SING N N 43 A1DNH C16 H15 SING N N 44 A1DNH C18 H16 SING N N 45 A1DNH C18 H17 SING N N 46 A1DNH N7 H18 SING N N 47 A1DNH N7 H19 SING N N 48 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1DNH SMILES ACDLabs 14.52 "COc1cccc(OCCCN)c1c1cc(Nc2ncc(C#N)nc2)n[NH]1" A1DNH InChI InChI 1.06 "InChI=1S/C18H19N7O2/c1-26-14-4-2-5-15(27-7-3-6-19)18(14)13-8-16(25-24-13)23-17-11-21-12(9-20)10-22-17/h2,4-5,8,10-11H,3,6-7,19H2,1H3,(H2,22,23,24,25)" A1DNH InChIKey InChI 1.06 DOTGPNHGTYJDEP-UHFFFAOYSA-N A1DNH SMILES_CANONICAL CACTVS 3.385 "COc1cccc(OCCCN)c1c2[nH]nc(Nc3cnc(cn3)C#N)c2" A1DNH SMILES CACTVS 3.385 "COc1cccc(OCCCN)c1c2[nH]nc(Nc3cnc(cn3)C#N)c2" A1DNH SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "COc1cccc(c1c2cc(n[nH]2)Nc3cnc(cn3)C#N)OCCCN" A1DNH SMILES "OpenEye OEToolkits" 3.1.0.0 "COc1cccc(c1c2cc(n[nH]2)Nc3cnc(cn3)C#N)OCCCN" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1DNH "SYSTEMATIC NAME" ACDLabs 14.52 "5-({(5P)-5-[2-(3-aminopropoxy)-6-methoxyphenyl]-1H-pyrazol-3-yl}amino)pyrazine-2-carbonitrile" A1DNH "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "5-[[5-[2-(3-azanylpropoxy)-6-methoxy-phenyl]-1~{H}-pyrazol-3-yl]amino]pyrazine-2-carbonitrile" # _pdbx_chem_comp_synonyms.ordinal 1 _pdbx_chem_comp_synonyms.comp_id A1DNH _pdbx_chem_comp_synonyms.name "5-({(5P)-5-[2-(3-aminopropoxy)-6-methoxyphenyl]-1H-pyrazol-3-yl}amino)pyrazine-2-carbonitrile" _pdbx_chem_comp_synonyms.provenance PDB _pdbx_chem_comp_synonyms.type "systematic name" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1DNH "Create component" 2026-07-21 RCSB A1DNH "Initial release" 2026-08-05 RCSB #