data_A1DOE # _chem_comp.id A1DOE _chem_comp.name "1-[(2-cyclopropyl-1,3-thiazol-4-yl)methyl]-1H-1,3-benzimidazole" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C14 H13 N3 S" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2026-07-23 _chem_comp.pdbx_modified_date 2026-07-31 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 255.338 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1DOE _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 14VK _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1DOE C1 C1 C 0 1 Y N N N N N -15.980 67.396 -10.661 3.924 -2.145 0.497 C1 A1DOE 1 A1DOE C2 C2 C 0 1 Y N N N N N -16.940 66.556 -11.225 2.897 -2.413 -0.396 C2 A1DOE 2 A1DOE C3 C3 C 0 1 Y N N N N N -16.987 65.206 -10.943 2.065 -1.401 -0.828 C3 A1DOE 3 A1DOE C4 C4 C 0 1 Y N N N N N -16.024 64.725 -10.069 2.258 -0.107 -0.365 C4 A1DOE 4 A1DOE C5 C5 C 0 1 Y N N N N N -15.052 65.551 -9.495 3.299 0.164 0.540 C5 A1DOE 5 A1DOE C6 C6 C 0 1 Y N N N N N -15.021 66.911 -9.806 4.130 -0.877 0.963 C6 A1DOE 6 A1DOE N1 N1 N 0 1 Y N N N N N -14.237 64.805 -8.648 3.249 1.493 0.813 N1 A1DOE 7 A1DOE C7 C7 C 0 1 Y N N N N N -14.725 63.590 -8.724 2.271 2.039 0.152 C7 A1DOE 8 A1DOE N2 N2 N 0 1 Y N N N N N -15.788 63.455 -9.561 1.626 1.099 -0.591 N2 A1DOE 9 A1DOE C8 C8 C 0 1 N N N N N N -16.558 62.235 -9.786 0.475 1.325 -1.468 C8 A1DOE 10 A1DOE C9 C9 C 0 1 Y N N N N N -17.770 62.190 -8.881 -0.796 1.027 -0.715 C9 A1DOE 11 A1DOE C10 C10 C 0 1 Y N N N N N -17.776 62.023 -7.537 -1.403 1.927 0.064 C10 A1DOE 12 A1DOE S1 S1 S 0 1 Y N N N N N -19.352 62.124 -6.861 -2.841 1.171 0.748 S1 A1DOE 13 A1DOE C11 C11 C 0 1 Y N N N N N -19.821 62.672 -8.450 -2.483 -0.280 -0.083 C11 A1DOE 14 A1DOE C12 C12 C 0 1 N N N N N N -21.003 63.530 -8.740 -3.312 -1.536 -0.020 C12 A1DOE 15 A1DOE C13 C13 C 0 1 N N N N N N -21.914 63.267 -9.900 -4.766 -1.448 -0.488 C13 A1DOE 16 A1DOE C14 C14 C 0 1 N N N N N N -20.971 64.401 -9.965 -4.449 -1.582 1.003 C14 A1DOE 17 A1DOE N3 N3 N 0 1 Y N N N N N -18.980 62.349 -9.384 -1.403 -0.141 -0.776 N3 A1DOE 18 A1DOE H1 H1 H 0 1 N N N N N N -15.991 68.449 -10.901 4.565 -2.947 0.831 H1 A1DOE 19 A1DOE H2 H2 H 0 1 N N N N N N -17.669 66.975 -11.903 2.747 -3.420 -0.755 H2 A1DOE 20 A1DOE H3 H3 H 0 1 N N N N N N -17.734 64.559 -11.379 1.267 -1.615 -1.523 H3 A1DOE 21 A1DOE H4 H4 H 0 1 N N N N N N -14.267 67.561 -9.388 4.932 -0.679 1.658 H4 A1DOE 22 A1DOE H5 H5 H 0 1 N N N N N N -14.315 62.762 -8.166 2.009 3.086 0.187 H5 A1DOE 23 A1DOE H6 H6 H 0 1 N N N N N N -16.890 62.206 -10.834 0.467 2.365 -1.797 H6 A1DOE 24 A1DOE H7 H7 H 0 1 N N N N N N -15.921 61.363 -9.579 0.545 0.670 -2.336 H7 A1DOE 25 A1DOE H8 H8 H 0 1 N N N N N N -16.885 61.845 -6.953 -1.071 2.939 0.244 H8 A1DOE 26 A1DOE H9 H9 H 0 1 N N N N N N -21.485 63.981 -7.860 -2.775 -2.464 -0.219 H9 A1DOE 27 A1DOE H10 H10 H 0 1 N N N N N N -21.752 62.383 -10.534 -5.123 -0.480 -0.841 H10 A1DOE 28 A1DOE H11 H11 H 0 1 N N N N N N -22.993 63.457 -9.803 -5.186 -2.317 -0.994 H11 A1DOE 29 A1DOE H12 H12 H 0 1 N N N N N N -20.108 64.359 -10.646 -4.660 -2.541 1.478 H12 A1DOE 30 A1DOE H13 H13 H 0 1 N N N N N N -21.349 65.433 -9.915 -4.597 -0.704 1.630 H13 A1DOE 31 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1DOE C1 C2 DOUB Y N 1 A1DOE C2 C3 SING Y N 2 A1DOE C3 C4 DOUB Y N 3 A1DOE C4 C5 SING Y N 4 A1DOE C5 C6 DOUB Y N 5 A1DOE C5 N1 SING Y N 6 A1DOE N1 C7 DOUB Y N 7 A1DOE C7 N2 SING Y N 8 A1DOE N2 C8 SING N N 9 A1DOE C8 C9 SING N N 10 A1DOE C9 C10 DOUB Y N 11 A1DOE C10 S1 SING Y N 12 A1DOE S1 C11 SING Y N 13 A1DOE C11 C12 SING N N 14 A1DOE C12 C13 SING N N 15 A1DOE C13 C14 SING N N 16 A1DOE C11 N3 DOUB Y N 17 A1DOE C1 C6 SING Y N 18 A1DOE C9 N3 SING Y N 19 A1DOE C4 N2 SING Y N 20 A1DOE C12 C14 SING N N 21 A1DOE C1 H1 SING N N 22 A1DOE C2 H2 SING N N 23 A1DOE C3 H3 SING N N 24 A1DOE C6 H4 SING N N 25 A1DOE C7 H5 SING N N 26 A1DOE C8 H6 SING N N 27 A1DOE C8 H7 SING N N 28 A1DOE C10 H8 SING N N 29 A1DOE C12 H9 SING N N 30 A1DOE C13 H10 SING N N 31 A1DOE C13 H11 SING N N 32 A1DOE C14 H12 SING N N 33 A1DOE C14 H13 SING N N 34 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1DOE SMILES ACDLabs 14.52 "C(c1csc(n1)C1CC1)n1cnc2ccccc21" A1DOE InChI InChI 1.06 "InChI=1S/C14H13N3S/c1-2-4-13-12(3-1)15-9-17(13)7-11-8-18-14(16-11)10-5-6-10/h1-4,8-10H,5-7H2" A1DOE InChIKey InChI 1.06 SKPHUCBOKAGPAC-UHFFFAOYSA-N A1DOE SMILES_CANONICAL CACTVS 3.385 "C1CC1c2scc(Cn3cnc4ccccc34)n2" A1DOE SMILES CACTVS 3.385 "C1CC1c2scc(Cn3cnc4ccccc34)n2" A1DOE SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1ccc2c(c1)ncn2Cc3csc(n3)C4CC4" A1DOE SMILES "OpenEye OEToolkits" 3.1.0.0 "c1ccc2c(c1)ncn2Cc3csc(n3)C4CC4" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1DOE "SYSTEMATIC NAME" ACDLabs 14.52 "1-[(2-cyclopropyl-1,3-thiazol-4-yl)methyl]-1H-1,3-benzimidazole" A1DOE "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "4-(benzimidazol-1-ylmethyl)-2-cyclopropyl-1,3-thiazole" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1DOE "Create component" 2026-07-23 RCSB A1DOE "Initial release" 2026-08-05 RCSB #