data_A1DOO # _chem_comp.id A1DOO _chem_comp.name "3-{[(3R)-1-methylpiperidin-3-yl]methoxy}pyridine-4-carbonitrile" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C13 H17 N3 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2026-07-23 _chem_comp.pdbx_modified_date 2026-07-31 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 231.294 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1DOO _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 14VL _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1DOO C1 C1 C 0 1 N N N N N N -19.680 61.117 -5.675 3.602 -1.786 0.430 C1 A1DOO 1 A1DOO N1 N1 N 0 1 N N N N N N -19.537 61.051 -7.130 3.498 -0.894 -0.733 N1 A1DOO 2 A1DOO C2 C2 C 0 1 N N N N N N -19.757 59.669 -7.581 4.479 0.195 -0.651 C2 A1DOO 3 A1DOO C3 C3 C 0 1 N N N N N N -19.493 59.498 -9.058 4.193 1.049 0.587 C3 A1DOO 4 A1DOO C4 C4 C 0 1 N N N N N N -19.164 60.814 -9.733 2.775 1.620 0.490 C4 A1DOO 5 A1DOO C5 C5 C 0 1 N N R N N N -18.017 61.556 -9.048 1.777 0.467 0.357 C5 A1DOO 6 A1DOO C6 C6 C 0 1 N N N N N N -17.911 62.971 -9.589 0.363 1.031 0.200 C6 A1DOO 7 A1DOO O1 O1 O 0 1 N N N N N N -16.555 63.441 -9.538 -0.580 -0.043 0.192 O1 A1DOO 8 A1DOO C7 C7 C 0 1 Y N N N N N -16.297 64.682 -10.082 -1.889 0.288 0.059 C7 A1DOO 9 A1DOO C8 C8 C 0 1 Y N N N N N -16.962 65.189 -11.189 -2.273 1.616 -0.062 C8 A1DOO 10 A1DOO N2 N2 N 0 1 Y N N N N N -16.711 66.412 -11.689 -3.542 1.942 -0.192 N2 A1DOO 11 A1DOO C9 C9 C 0 1 Y N N N N N -15.795 67.176 -11.088 -4.501 1.037 -0.213 C9 A1DOO 12 A1DOO C10 C10 C 0 1 Y N N N N N -15.096 66.780 -9.962 -4.214 -0.308 -0.098 C10 A1DOO 13 A1DOO C11 C11 C 0 1 Y N N N N N -15.347 65.502 -9.443 -2.879 -0.708 0.036 C11 A1DOO 14 A1DOO C12 C12 C 0 1 N N N N N N -14.647 65.037 -8.277 -2.534 -2.093 0.152 C12 A1DOO 15 A1DOO N3 N3 N 0 1 N N N N N N -14.084 64.720 -7.341 -2.260 -3.192 0.244 N3 A1DOO 16 A1DOO C13 C13 C 0 1 N N N N N N -18.207 61.523 -7.532 2.133 -0.370 -0.874 C13 A1DOO 17 A1DOO H1 H1 H 0 1 N N N N N N -19.516 62.151 -5.336 3.348 -1.233 1.335 H1 A1DOO 18 A1DOO H2 H2 H 0 1 N N N N N N -20.693 60.795 -5.391 2.913 -2.622 0.310 H2 A1DOO 19 A1DOO H3 H3 H 0 1 N N N N N N -18.939 60.455 -5.203 4.621 -2.163 0.508 H3 A1DOO 20 A1DOO H4 H5 H 0 1 N N N N N N -19.083 59.003 -7.022 5.482 -0.225 -0.578 H4 A1DOO 21 A1DOO H5 H6 H 0 1 N N N N N N -20.801 59.392 -7.374 4.409 0.816 -1.544 H5 A1DOO 22 A1DOO H6 H7 H 0 1 N N N N N N -18.645 58.810 -9.190 4.277 0.432 1.482 H6 A1DOO 23 A1DOO H7 H8 H 0 1 N N N N N N -20.389 59.070 -9.532 4.912 1.866 0.639 H7 A1DOO 24 A1DOO H8 H9 H 0 1 N N N N N N -18.880 60.613 -10.777 2.552 2.193 1.390 H8 A1DOO 25 A1DOO H9 H10 H 0 1 N N N N N N -20.059 61.453 -9.713 2.702 2.268 -0.383 H9 A1DOO 26 A1DOO H10 H11 H 0 1 N N N N N N -17.081 61.028 -9.285 1.822 -0.159 1.248 H10 A1DOO 27 A1DOO H11 H12 H 0 1 N N N N N N -18.257 62.984 -10.633 0.145 1.700 1.031 H11 A1DOO 28 A1DOO H12 H13 H 0 1 N N N N N N -18.545 63.636 -8.984 0.294 1.582 -0.738 H12 A1DOO 29 A1DOO H13 H14 H 0 1 N N N N N N -17.711 64.577 -11.669 -1.521 2.391 -0.050 H13 A1DOO 30 A1DOO H14 H15 H 0 1 N N N N N N -15.590 68.152 -11.502 -5.528 1.353 -0.321 H14 A1DOO 31 A1DOO H15 H16 H 0 1 N N N N N N -14.377 67.437 -9.496 -5.006 -1.041 -0.116 H15 A1DOO 32 A1DOO H16 H17 H 0 1 N N N N N N -17.451 60.851 -7.099 2.074 0.253 -1.766 H16 A1DOO 33 A1DOO H17 H18 H 0 1 N N N N N N -18.062 62.540 -7.139 1.433 -1.200 -0.964 H17 A1DOO 34 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1DOO C1 N1 SING N N 1 A1DOO N1 C2 SING N N 2 A1DOO C2 C3 SING N N 3 A1DOO C3 C4 SING N N 4 A1DOO C4 C5 SING N N 5 A1DOO C5 C6 SING N N 6 A1DOO C6 O1 SING N N 7 A1DOO O1 C7 SING N N 8 A1DOO C7 C8 DOUB Y N 9 A1DOO C8 N2 SING Y N 10 A1DOO N2 C9 DOUB Y N 11 A1DOO C9 C10 SING Y N 12 A1DOO C10 C11 DOUB Y N 13 A1DOO C11 C12 SING N N 14 A1DOO C12 N3 TRIP N N 15 A1DOO C5 C13 SING N N 16 A1DOO N1 C13 SING N N 17 A1DOO C7 C11 SING Y N 18 A1DOO C1 H1 SING N N 19 A1DOO C1 H2 SING N N 20 A1DOO C1 H3 SING N N 21 A1DOO C2 H4 SING N N 22 A1DOO C2 H5 SING N N 23 A1DOO C3 H6 SING N N 24 A1DOO C3 H7 SING N N 25 A1DOO C4 H8 SING N N 26 A1DOO C4 H9 SING N N 27 A1DOO C5 H10 SING N N 28 A1DOO C6 H11 SING N N 29 A1DOO C6 H12 SING N N 30 A1DOO C8 H13 SING N N 31 A1DOO C9 H14 SING N N 32 A1DOO C10 H15 SING N N 33 A1DOO C13 H16 SING N N 34 A1DOO C13 H17 SING N N 35 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1DOO SMILES ACDLabs 14.52 "CN1CCCC(COc2cnccc2C#N)C1" A1DOO InChI InChI 1.06 "InChI=1S/C13H17N3O/c1-16-6-2-3-11(9-16)10-17-13-8-15-5-4-12(13)7-14/h4-5,8,11H,2-3,6,9-10H2,1H3/t11-/m1/s1" A1DOO InChIKey InChI 1.06 ZPLWJZMZQBBSSQ-LLVKDONJSA-N A1DOO SMILES_CANONICAL CACTVS 3.385 "CN1CCC[C@@H](COc2cnccc2C#N)C1" A1DOO SMILES CACTVS 3.385 "CN1CCC[CH](COc2cnccc2C#N)C1" A1DOO SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "CN1CCC[C@H](C1)COc2cnccc2C#N" A1DOO SMILES "OpenEye OEToolkits" 3.1.0.0 "CN1CCCC(C1)COc2cnccc2C#N" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1DOO "SYSTEMATIC NAME" ACDLabs 14.52 "3-{[(3R)-1-methylpiperidin-3-yl]methoxy}pyridine-4-carbonitrile" A1DOO "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "3-[[(3~{R})-1-methylpiperidin-3-yl]methoxy]pyridine-4-carbonitrile" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1DOO "Create component" 2026-07-23 RCSB A1DOO "Initial release" 2026-08-05 RCSB #