data_A1DT2 # _chem_comp.id A1DT2 _chem_comp.name "N-ethyl-N'-{6-[(2R)-2-(2-hydroxypropan-2-yl)pyrrolidin-1-yl]pyrimidin-4-yl}urea" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C14 H23 N5 O2" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2026-08-20 _chem_comp.pdbx_modified_date 2026-10-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 293.365 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1DT2 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 15CV _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? _chem_comp.pdbx_comp_type ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1DT2 C13 C1 C 0 1 N N N N N N -42.249 -31.088 1.822 5.217 -1.448 0.174 C13 A1DT2 1 A1DT2 C11 C2 C 0 1 N N N N N N -43.452 -31.121 2.783 4.128 -0.707 -0.605 C11 A1DT2 2 A1DT2 C12 C3 C 0 1 N N N N N N -44.212 -32.453 2.636 3.330 -1.707 -1.444 C12 A1DT2 3 A1DT2 C1 C4 C 0 1 N N N N N N -52.388 -29.806 9.230 -7.513 0.541 -0.684 C1 A1DT2 4 A1DT2 C10 C5 C 0 1 N N R N N N -44.352 -29.860 2.573 3.190 -0.001 0.376 C10 A1DT2 5 A1DT2 C14 C6 C 0 1 Y N N N N N -44.671 -29.312 6.694 -0.339 -1.343 1.408 C14 A1DT2 6 A1DT2 C2 C7 C 0 1 N N N N N N -51.736 -29.418 7.897 -6.332 -0.148 0.001 C2 A1DT2 7 A1DT2 C3 C8 C 0 1 N N N N N N -49.414 -29.323 7.019 -3.898 -0.100 -0.097 C3 A1DT2 8 A1DT2 C4 C9 C 0 1 Y N N N N N -46.964 -29.222 6.680 -1.527 -0.028 -0.065 C4 A1DT2 9 A1DT2 C5 C10 C 0 1 Y N N N N N -46.965 -29.468 5.293 -0.336 0.533 -0.512 C5 A1DT2 10 A1DT2 C6 C11 C 0 1 Y N N N N N -45.707 -29.623 4.686 0.855 0.089 0.054 C6 A1DT2 11 A1DT2 C7 C12 C 0 1 N N N N N N -46.797 -29.863 2.491 2.113 2.078 -0.140 C7 A1DT2 12 A1DT2 C8 C13 C 0 1 N N N N N N -46.275 -30.136 1.081 2.877 2.257 1.196 C8 A1DT2 13 A1DT2 C9 C14 C 0 1 N N N N N N -44.834 -29.629 1.125 3.944 1.135 1.099 C9 A1DT2 14 A1DT2 N1 N1 N 0 1 N N N N N N -50.291 -29.288 8.032 -5.077 0.366 -0.553 N1 A1DT2 15 A1DT2 N2 N2 N 0 1 N N N N N N -48.146 -29.138 7.434 -2.743 0.374 -0.607 N2 A1DT2 16 A1DT2 N3 N3 N 0 1 N N N N N N -45.604 -29.870 3.324 2.069 0.616 -0.358 N3 A1DT2 17 A1DT2 N4 N4 N 0 1 Y N N N N N -44.560 -29.532 5.394 0.811 -0.840 1.008 N4 A1DT2 18 A1DT2 N5 N5 N 0 1 Y N N N N N -45.805 -29.184 7.372 -1.487 -0.956 0.889 N5 A1DT2 19 A1DT2 O1 O1 O 0 1 N N N N N N -49.752 -29.478 5.848 -3.875 -0.948 0.774 O1 A1DT2 20 A1DT2 O2 O2 O 0 1 N N N N N N -42.883 -31.113 4.082 4.733 0.261 -1.466 O2 A1DT2 21 A1DT2 H20 H1 H 0 1 N N N N N N -41.627 -31.981 1.982 5.785 -0.735 0.771 H20 A1DT2 22 A1DT2 H19 H2 H 0 1 N N N N N N -42.610 -31.074 0.783 4.755 -2.186 0.830 H19 A1DT2 23 A1DT2 H21 H3 H 0 1 N N N N N N -41.651 -30.185 2.014 5.885 -1.951 -0.525 H21 A1DT2 24 A1DT2 H16 H4 H 0 1 N N N N N N -45.068 -32.465 3.326 2.869 -2.445 -0.788 H16 A1DT2 25 A1DT2 H18 H5 H 0 1 N N N N N N -44.573 -32.557 1.602 2.555 -1.179 -1.999 H18 A1DT2 26 A1DT2 H17 H6 H 0 1 N N N N N N -43.537 -33.288 2.874 3.999 -2.210 -2.143 H17 A1DT2 27 A1DT2 H2 H7 H 0 1 N N N N N N -53.476 -29.896 9.094 -8.447 0.158 -0.272 H2 A1DT2 28 A1DT2 H1 H8 H 0 1 N N N N N N -51.980 -30.769 9.571 -7.455 1.616 -0.514 H1 A1DT2 29 A1DT2 H3 H9 H 0 1 N N N N N N -52.175 -29.031 9.981 -7.480 0.341 -1.755 H3 A1DT2 30 A1DT2 H15 H10 H 0 1 N N N N N N -43.765 -28.980 2.875 2.807 -0.717 1.103 H15 A1DT2 31 A1DT2 H23 H11 H 0 1 N N N N N N -43.753 -29.229 7.256 -0.341 -2.097 2.180 H23 A1DT2 32 A1DT2 H5 H12 H 0 1 N N N N N N -52.152 -28.457 7.561 -6.365 0.052 1.072 H5 A1DT2 33 A1DT2 H4 H13 H 0 1 N N N N N N -51.958 -30.195 7.150 -6.390 -1.223 -0.169 H4 A1DT2 34 A1DT2 H8 H14 H 0 1 N N N N N N -47.882 -29.534 4.727 -0.335 1.288 -1.285 H8 A1DT2 35 A1DT2 H10 H15 H 0 1 N N N N N N -47.299 -28.886 2.538 1.103 2.479 -0.056 H10 A1DT2 36 A1DT2 H9 H16 H 0 1 N N N N N N -47.497 -30.651 2.807 2.648 2.567 -0.954 H9 A1DT2 37 A1DT2 H12 H17 H 0 1 N N N N N N -46.862 -29.585 0.332 3.346 3.239 1.249 H12 A1DT2 38 A1DT2 H11 H18 H 0 1 N N N N N N -46.306 -31.212 0.853 2.216 2.095 2.048 H11 A1DT2 39 A1DT2 H14 H19 H 0 1 N N N N N N -44.208 -30.193 0.418 4.260 0.816 2.092 H14 A1DT2 40 A1DT2 H13 H20 H 0 1 N N N N N N -44.797 -28.558 0.875 4.799 1.466 0.509 H13 A1DT2 41 A1DT2 H6 H21 H 0 1 N N N N N N -49.924 -29.163 8.954 -5.095 1.043 -1.248 H6 A1DT2 42 A1DT2 H7 H22 H 0 1 N N N N N N -48.032 -28.912 8.401 -2.761 0.995 -1.352 H7 A1DT2 43 A1DT2 H22 H23 H 0 1 N N N N N N -43.576 -31.132 4.732 5.342 -0.117 -2.115 H22 A1DT2 44 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1DT2 C8 C9 SING N N 1 A1DT2 C8 C7 SING N N 2 A1DT2 C9 C10 SING N N 3 A1DT2 C13 C11 SING N N 4 A1DT2 C7 N3 SING N N 5 A1DT2 C10 C11 SING N N 6 A1DT2 C10 N3 SING N N 7 A1DT2 C12 C11 SING N N 8 A1DT2 C11 O2 SING N N 9 A1DT2 N3 C6 SING N N 10 A1DT2 C6 C5 DOUB Y N 11 A1DT2 C6 N4 SING Y N 12 A1DT2 C5 C4 SING Y N 13 A1DT2 N4 C14 DOUB Y N 14 A1DT2 O1 C3 DOUB N N 15 A1DT2 C4 N5 DOUB Y N 16 A1DT2 C4 N2 SING N N 17 A1DT2 C14 N5 SING Y N 18 A1DT2 C3 N2 SING N N 19 A1DT2 C3 N1 SING N N 20 A1DT2 C2 N1 SING N N 21 A1DT2 C2 C1 SING N N 22 A1DT2 C13 H20 SING N N 23 A1DT2 C13 H19 SING N N 24 A1DT2 C13 H21 SING N N 25 A1DT2 C12 H16 SING N N 26 A1DT2 C12 H18 SING N N 27 A1DT2 C12 H17 SING N N 28 A1DT2 C1 H2 SING N N 29 A1DT2 C1 H1 SING N N 30 A1DT2 C1 H3 SING N N 31 A1DT2 C10 H15 SING N N 32 A1DT2 C14 H23 SING N N 33 A1DT2 C2 H5 SING N N 34 A1DT2 C2 H4 SING N N 35 A1DT2 C5 H8 SING N N 36 A1DT2 C7 H10 SING N N 37 A1DT2 C7 H9 SING N N 38 A1DT2 C8 H12 SING N N 39 A1DT2 C8 H11 SING N N 40 A1DT2 C9 H14 SING N N 41 A1DT2 C9 H13 SING N N 42 A1DT2 N1 H6 SING N N 43 A1DT2 N2 H7 SING N N 44 A1DT2 O2 H22 SING N N 45 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1DT2 SMILES ACDLabs 14.52 "CCNC(=O)Nc1ncnc(c1)N1CCCC1C(C)(C)O" A1DT2 InChI InChI 1.06 "InChI=1S/C14H23N5O2/c1-4-15-13(20)18-11-8-12(17-9-16-11)19-7-5-6-10(19)14(2,3)21/h8-10,21H,4-7H2,1-3H3,(H2,15,16,17,18,20)/t10-/m1/s1" A1DT2 InChIKey InChI 1.06 GWLPJSNVNJLHCX-SNVBAGLBSA-N A1DT2 SMILES_CANONICAL CACTVS 3.385 "CCNC(=O)Nc1cc(ncn1)N2CCC[C@@H]2C(C)(C)O" A1DT2 SMILES CACTVS 3.385 "CCNC(=O)Nc1cc(ncn1)N2CCC[CH]2C(C)(C)O" A1DT2 SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "CCNC(=O)Nc1cc(ncn1)N2CCC[C@@H]2C(C)(C)O" A1DT2 SMILES "OpenEye OEToolkits" 3.1.0.0 "CCNC(=O)Nc1cc(ncn1)N2CCCC2C(C)(C)O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1DT2 "SYSTEMATIC NAME" ACDLabs 14.52 "N-ethyl-N'-{6-[(2R)-2-(2-hydroxypropan-2-yl)pyrrolidin-1-yl]pyrimidin-4-yl}urea" A1DT2 "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "1-ethyl-3-[6-[(2~{R})-2-(2-oxidanylpropan-2-yl)pyrrolidin-1-yl]pyrimidin-4-yl]urea" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1DT2 "Create component" 2026-08-20 RCSB A1DT2 "Initial release" 2026-11-04 RCSB #