data_A1DT6 # _chem_comp.id A1DT6 _chem_comp.name "1-[(8-amino-9H-pyrimido[4,5-b]indol-4-yl)amino]-5,5-dimethylpyrrolidin-2-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C16 H18 N6 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2026-08-20 _chem_comp.pdbx_modified_date 2026-10-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 310.354 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1DT6 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 15DS _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? _chem_comp.pdbx_comp_type ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1DT6 C13 C1 C 0 1 Y N N N N N -49.986 -29.311 3.743 -3.088 2.631 0.349 C13 A1DT6 1 A1DT6 C16 C2 C 0 1 Y N N N N N -46.339 -29.514 4.958 -1.032 -0.583 -0.031 C16 A1DT6 2 A1DT6 C15 C3 C 0 1 Y N N N N N -47.759 -29.423 4.719 -2.029 0.492 0.086 C15 A1DT6 3 A1DT6 C11 C4 C 0 1 Y N N N N N -49.766 -29.153 6.141 -4.437 0.664 0.036 C11 A1DT6 4 A1DT6 C12 C5 C 0 1 Y N N N N N -50.572 -29.176 5.000 -4.332 2.032 0.224 C12 A1DT6 5 A1DT6 C1 C6 C 0 1 N N N N N N -43.291 -27.948 1.433 2.920 2.215 -1.424 C1 A1DT6 6 A1DT6 C10 C7 C 0 1 Y N N N N N -48.375 -29.278 5.998 -3.283 -0.119 -0.041 C10 A1DT6 7 A1DT6 C14 C8 C 0 1 Y N N N N N -48.590 -29.436 3.583 -1.941 1.871 0.281 C14 A1DT6 8 A1DT6 C2 C9 C 0 1 N N N N N N -43.452 -29.420 1.019 3.392 0.873 -0.861 C2 A1DT6 9 A1DT6 C3 C10 C 0 1 N N N N N N -44.404 -29.514 -0.189 3.419 -0.184 -1.966 C3 A1DT6 10 A1DT6 C4 C11 C 0 1 N N N N N N -42.088 -30.101 0.724 4.793 1.022 -0.227 C4 A1DT6 11 A1DT6 C5 C12 C 0 1 N N N N N N -42.126 -31.474 1.405 4.700 0.053 0.974 C5 A1DT6 12 A1DT6 C6 C13 C 0 1 N N N N N N -43.289 -31.340 2.377 3.219 -0.027 1.273 C6 A1DT6 13 A1DT6 C7 C14 C 0 1 Y N N N N N -45.148 -29.670 4.212 0.366 -0.636 0.009 C7 A1DT6 14 A1DT6 C8 C15 C 0 1 Y N N N N N -43.962 -29.602 6.196 0.251 -2.916 -0.313 C8 A1DT6 15 A1DT6 C9 C16 C 0 1 Y N N N N N -46.172 -29.423 6.364 -1.748 -1.776 -0.221 C9 A1DT6 16 A1DT6 N1 N1 N 0 1 N N N N N N -43.976 -30.217 2.125 2.511 0.443 0.232 N1 A1DT6 17 A1DT6 N2 N2 N 0 1 N N N N N N -45.119 -29.779 2.819 1.113 0.514 0.194 N2 A1DT6 18 A1DT6 N3 N3 N 0 1 Y N N N N N -43.967 -29.706 4.869 0.961 -1.817 -0.136 N3 A1DT6 19 A1DT6 N4 N4 N 0 1 Y N N N N N -44.990 -29.463 7.020 -1.064 -2.912 -0.357 N4 A1DT6 20 A1DT6 N5 N5 N 0 1 Y N N N N N -47.400 -29.282 6.982 -3.088 -1.480 -0.225 N5 A1DT6 21 A1DT6 N6 N6 N 0 1 N N N N N N -50.327 -29.028 7.405 -5.697 0.070 -0.089 N6 A1DT6 22 A1DT6 O1 O1 O 0 1 N N N N N N -43.533 -32.167 3.246 2.740 -0.454 2.303 O1 A1DT6 23 A1DT6 H17 H1 H 0 1 N N N N N N -50.618 -29.320 2.867 -3.017 3.698 0.496 H17 A1DT6 24 A1DT6 H16 H2 H 0 1 N N N N N N -51.645 -29.090 5.092 -5.225 2.637 0.275 H16 A1DT6 25 A1DT6 H1 H3 H 0 1 N N N N N N -42.611 -27.881 2.295 2.913 2.961 -0.629 H1 A1DT6 26 A1DT6 H2 H4 H 0 1 N N N N N N -42.874 -27.374 0.592 3.597 2.534 -2.217 H2 A1DT6 27 A1DT6 H3 H5 H 0 1 N N N N N N -44.273 -27.535 1.707 1.914 2.105 -1.829 H3 A1DT6 28 A1DT6 H18 H6 H 0 1 N N N N N N -48.162 -29.541 2.597 -0.974 2.342 0.379 H18 A1DT6 29 A1DT6 H6 H7 H 0 1 N N N N N N -45.357 -29.023 0.056 4.112 0.125 -2.748 H6 A1DT6 30 A1DT6 H5 H8 H 0 1 N N N N N N -43.946 -29.015 -1.056 3.745 -1.138 -1.549 H5 A1DT6 31 A1DT6 H4 H9 H 0 1 N N N N N N -44.588 -30.572 -0.429 2.420 -0.295 -2.388 H4 A1DT6 32 A1DT6 H8 H10 H 0 1 N N N N N N -41.950 -30.219 -0.361 5.571 0.709 -0.922 H8 A1DT6 33 A1DT6 H7 H11 H 0 1 N N N N N N -41.266 -29.497 1.134 4.962 2.045 0.110 H7 A1DT6 34 A1DT6 H9 H12 H 0 1 N N N N N N -42.312 -32.274 0.673 5.088 -0.929 0.703 H9 A1DT6 35 A1DT6 H10 H13 H 0 1 N N N N N N -41.186 -31.677 1.939 5.241 0.454 1.831 H10 A1DT6 36 A1DT6 H12 H14 H 0 1 N N N N N N -42.989 -29.635 6.664 0.771 -3.856 -0.427 H12 A1DT6 37 A1DT6 H11 H15 H 0 1 N N N N N N -45.330 -28.868 2.463 0.668 1.370 0.299 H11 A1DT6 38 A1DT6 H13 H16 H 0 1 N N N N N N -47.557 -29.198 7.966 -3.799 -2.131 -0.339 H13 A1DT6 39 A1DT6 H15 H17 H 0 1 N N N N N N -49.602 -29.030 8.094 -6.498 0.616 -0.043 H15 A1DT6 40 A1DT6 H14 H18 H 0 1 N N N N N N -50.836 -28.169 7.460 -5.770 -0.888 -0.221 H14 A1DT6 41 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1DT6 C3 C2 SING N N 1 A1DT6 C4 C2 SING N N 2 A1DT6 C4 C5 SING N N 3 A1DT6 C2 C1 SING N N 4 A1DT6 C2 N1 SING N N 5 A1DT6 C5 C6 SING N N 6 A1DT6 N1 C6 SING N N 7 A1DT6 N1 N2 SING N N 8 A1DT6 C6 O1 DOUB N N 9 A1DT6 N2 C7 SING N N 10 A1DT6 C14 C13 DOUB Y N 11 A1DT6 C14 C15 SING Y N 12 A1DT6 C13 C12 SING Y N 13 A1DT6 C7 N3 DOUB Y N 14 A1DT6 C7 C16 SING Y N 15 A1DT6 C15 C16 SING Y N 16 A1DT6 C15 C10 DOUB Y N 17 A1DT6 N3 C8 SING Y N 18 A1DT6 C16 C9 DOUB Y N 19 A1DT6 C12 C11 DOUB Y N 20 A1DT6 C10 C11 SING Y N 21 A1DT6 C10 N5 SING Y N 22 A1DT6 C11 N6 SING N N 23 A1DT6 C8 N4 DOUB Y N 24 A1DT6 C9 N5 SING Y N 25 A1DT6 C9 N4 SING Y N 26 A1DT6 C13 H17 SING N N 27 A1DT6 C12 H16 SING N N 28 A1DT6 C1 H1 SING N N 29 A1DT6 C1 H2 SING N N 30 A1DT6 C1 H3 SING N N 31 A1DT6 C14 H18 SING N N 32 A1DT6 C3 H6 SING N N 33 A1DT6 C3 H5 SING N N 34 A1DT6 C3 H4 SING N N 35 A1DT6 C4 H8 SING N N 36 A1DT6 C4 H7 SING N N 37 A1DT6 C5 H9 SING N N 38 A1DT6 C5 H10 SING N N 39 A1DT6 C8 H12 SING N N 40 A1DT6 N2 H11 SING N N 41 A1DT6 N5 H13 SING N N 42 A1DT6 N6 H15 SING N N 43 A1DT6 N6 H14 SING N N 44 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1DT6 SMILES ACDLabs 14.52 "Nc1cccc2c3c(ncnc3[NH]c21)NN1C(=O)CCC1(C)C" A1DT6 InChI InChI 1.06 "InChI=1S/C16H18N6O/c1-16(2)7-6-11(23)22(16)21-15-12-9-4-3-5-10(17)13(9)20-14(12)18-8-19-15/h3-5,8H,6-7,17H2,1-2H3,(H2,18,19,20,21)" A1DT6 InChIKey InChI 1.06 ZGOSQTVSLUNVHE-UHFFFAOYSA-N A1DT6 SMILES_CANONICAL CACTVS 3.385 "CC1(C)CCC(=O)N1Nc2ncnc3[nH]c4c(N)cccc4c23" A1DT6 SMILES CACTVS 3.385 "CC1(C)CCC(=O)N1Nc2ncnc3[nH]c4c(N)cccc4c23" A1DT6 SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "CC1(CCC(=O)N1Nc2c3c4cccc(c4[nH]c3ncn2)N)C" A1DT6 SMILES "OpenEye OEToolkits" 3.1.0.0 "CC1(CCC(=O)N1Nc2c3c4cccc(c4[nH]c3ncn2)N)C" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1DT6 "SYSTEMATIC NAME" ACDLabs 14.52 "1-[(8-amino-9H-pyrimido[4,5-b]indol-4-yl)amino]-5,5-dimethylpyrrolidin-2-one" A1DT6 "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "1-[(8-azanyl-9~{H}-pyrimido[4,5-b]indol-4-yl)amino]-5,5-dimethyl-pyrrolidin-2-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1DT6 "Create component" 2026-08-20 RCSB A1DT6 "Initial release" 2026-11-04 RCSB #