data_A1DTP # _chem_comp.id A1DTP _chem_comp.name "(3R)-3-[(9H-pyrimido[4,5-b]indol-4-yl)amino]pyrrolidin-2-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C14 H13 N5 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2026-08-20 _chem_comp.pdbx_modified_date 2026-10-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 267.286 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1DTP _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 15AK _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? _chem_comp.pdbx_comp_type ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1DTP C13 C1 C 0 1 Y N N N N N -47.407 -29.395 4.058 1.939 0.576 -0.033 C13 A1DTP 1 A1DTP C11 C2 C 0 1 Y N N N N N -49.238 -28.947 2.479 2.812 2.805 0.096 C11 A1DTP 2 A1DTP C12 C3 C 0 1 Y N N N N N -47.898 -29.294 2.733 1.737 1.954 -0.038 C12 A1DTP 3 A1DTP C1 C4 C 0 1 N N N N N N -44.344 -32.610 2.282 -3.306 0.079 0.769 C1 A1DTP 4 A1DTP C10 C5 C 0 1 Y N N N N N -50.117 -28.692 3.548 4.094 2.294 0.237 C10 A1DTP 5 A1DTP C14 C6 C 0 1 Y N N N N N -46.136 -29.717 4.660 1.043 -0.585 -0.151 C14 A1DTP 6 A1DTP C2 C7 C 0 1 N N N N N N -44.510 -32.048 0.033 -4.618 1.480 -0.540 C2 A1DTP 7 A1DTP C3 C8 C 0 1 N N N N N N -43.645 -30.967 0.694 -3.250 1.394 -1.255 C3 A1DTP 8 A1DTP C4 C9 C 0 1 N N R N N N -43.758 -31.207 2.211 -2.617 0.157 -0.576 C4 A1DTP 9 A1DTP C5 C10 C 0 1 Y N N N N N -44.834 -30.075 4.223 -0.338 -0.749 -0.316 C5 A1DTP 10 A1DTP C6 C11 C 0 1 Y N N N N N -44.195 -30.189 6.450 -0.029 -3.034 -0.303 C6 A1DTP 11 A1DTP C7 C12 C 0 1 Y N N N N N -46.331 -29.635 6.064 1.853 -1.728 -0.067 C7 A1DTP 12 A1DTP C8 C13 C 0 1 Y N N N N N -48.316 -29.133 5.129 3.235 0.057 0.114 C8 A1DTP 13 A1DTP C9 C14 C 0 1 Y N N N N N -49.654 -28.785 4.874 4.308 0.933 0.249 C9 A1DTP 14 A1DTP N1 N1 N 0 1 N N N N N N -44.738 -33.024 1.078 -4.420 0.831 0.762 N1 A1DTP 15 A1DTP N2 N2 N 0 1 N N N N N N -44.550 -30.164 2.853 -1.175 0.348 -0.404 N2 A1DTP 16 A1DTP N3 N3 N 0 1 Y N N N N N -43.874 -30.301 5.157 -0.826 -1.986 -0.386 N3 A1DTP 17 A1DTP N4 N4 N 0 1 Y N N N N N -45.370 -29.871 6.996 1.273 -2.925 -0.147 N4 A1DTP 18 A1DTP N5 N5 N 0 1 Y N N N N N -47.645 -29.280 6.340 3.157 -1.325 0.091 N5 A1DTP 19 A1DTP O1 O1 O 0 1 N N N N N N -44.435 -33.259 3.318 -2.912 -0.570 1.714 O1 A1DTP 20 A1DTP H12 H1 H 0 1 N N N N N N -49.593 -28.876 1.461 2.657 3.874 0.092 H12 A1DTP 21 A1DTP H13 H2 H 0 1 N N N N N N -47.233 -29.486 1.904 0.740 2.354 -0.147 H13 A1DTP 22 A1DTP H11 H3 H 0 1 N N N N N N -51.145 -28.425 3.351 4.931 2.969 0.341 H11 A1DTP 23 A1DTP H3 H4 H 0 1 N N N N N N -45.463 -31.623 -0.316 -4.906 2.522 -0.402 H3 A1DTP 24 A1DTP H2 H5 H 0 1 N N N N N N -43.979 -32.505 -0.816 -5.378 0.950 -1.114 H2 A1DTP 25 A1DTP H4 H6 H 0 1 N N N N N N -42.599 -31.062 0.368 -3.379 1.229 -2.325 H4 A1DTP 26 A1DTP H5 H7 H 0 1 N N N N N N -44.020 -29.966 0.436 -2.656 2.288 -1.069 H5 A1DTP 27 A1DTP H6 H8 H 0 1 N N N N N N -42.746 -31.222 2.641 -2.817 -0.742 -1.159 H6 A1DTP 28 A1DTP H8 H9 H 0 1 N N N N N N -43.394 -30.382 7.148 -0.463 -4.021 -0.364 H8 A1DTP 29 A1DTP H10 H10 H 0 1 N N N N N N -50.327 -28.589 5.696 5.310 0.545 0.360 H10 A1DTP 30 A1DTP H1 H11 H 0 1 N N N N N N -45.150 -33.920 0.913 -5.017 0.932 1.520 H1 A1DTP 31 A1DTP H7 H12 H 0 1 N N N N N N -44.090 -29.306 2.624 -0.808 1.245 -0.351 H7 A1DTP 32 A1DTP H9 H13 H 0 1 N N N N N N -48.040 -29.152 7.250 3.915 -1.924 0.175 H9 A1DTP 33 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1DTP C2 C3 SING N N 1 A1DTP C2 N1 SING N N 2 A1DTP C3 C4 SING N N 3 A1DTP N1 C1 SING N N 4 A1DTP C4 C1 SING N N 5 A1DTP C4 N2 SING N N 6 A1DTP C1 O1 DOUB N N 7 A1DTP C11 C12 DOUB Y N 8 A1DTP C11 C10 SING Y N 9 A1DTP C12 C13 SING Y N 10 A1DTP N2 C5 SING N N 11 A1DTP C10 C9 DOUB Y N 12 A1DTP C13 C14 SING Y N 13 A1DTP C13 C8 DOUB Y N 14 A1DTP C5 C14 DOUB Y N 15 A1DTP C5 N3 SING Y N 16 A1DTP C14 C7 SING Y N 17 A1DTP C9 C8 SING Y N 18 A1DTP C8 N5 SING Y N 19 A1DTP N3 C6 DOUB Y N 20 A1DTP C7 N5 SING Y N 21 A1DTP C7 N4 DOUB Y N 22 A1DTP C6 N4 SING Y N 23 A1DTP C11 H12 SING N N 24 A1DTP C12 H13 SING N N 25 A1DTP C10 H11 SING N N 26 A1DTP C2 H3 SING N N 27 A1DTP C2 H2 SING N N 28 A1DTP C3 H4 SING N N 29 A1DTP C3 H5 SING N N 30 A1DTP C4 H6 SING N N 31 A1DTP C6 H8 SING N N 32 A1DTP C9 H10 SING N N 33 A1DTP N1 H1 SING N N 34 A1DTP N2 H7 SING N N 35 A1DTP N5 H9 SING N N 36 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1DTP SMILES ACDLabs 14.52 "O=C1NCCC1Nc1ncnc2[NH]c3ccccc3c12" A1DTP InChI InChI 1.06 "InChI=1S/C14H13N5O/c20-14-10(5-6-15-14)19-13-11-8-3-1-2-4-9(8)18-12(11)16-7-17-13/h1-4,7,10H,5-6H2,(H,15,20)(H2,16,17,18,19)/t10-/m1/s1" A1DTP InChIKey InChI 1.06 HWDLKFWYSHVMHZ-SNVBAGLBSA-N A1DTP SMILES_CANONICAL CACTVS 3.385 "O=C1NCC[C@H]1Nc2ncnc3[nH]c4ccccc4c23" A1DTP SMILES CACTVS 3.385 "O=C1NCC[CH]1Nc2ncnc3[nH]c4ccccc4c23" A1DTP SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1ccc2c(c1)c3c([nH]2)ncnc3N[C@@H]4CCNC4=O" A1DTP SMILES "OpenEye OEToolkits" 3.1.0.0 "c1ccc2c(c1)c3c([nH]2)ncnc3NC4CCNC4=O" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1DTP "SYSTEMATIC NAME" ACDLabs 14.52 "(3R)-3-[(9H-pyrimido[4,5-b]indol-4-yl)amino]pyrrolidin-2-one" A1DTP "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "(3~{R})-3-(9~{H}-pyrimido[4,5-b]indol-4-ylamino)pyrrolidin-2-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1DTP "Create component" 2026-08-20 RCSB A1DTP "Initial release" 2026-11-04 RCSB #