data_A1DU4 # _chem_comp.id A1DU4 _chem_comp.name "(5S)-5-phenyl-1-[(7H-pyrrolo[2,3-d]pyrimidin-4-yl)amino]pyrrolidin-2-one" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C16 H15 N5 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2026-08-21 _chem_comp.pdbx_modified_date 2026-10-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 293.323 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1DU4 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 15AP _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? _chem_comp.pdbx_comp_type ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1DU4 C13 C1 C 0 1 Y N N N N N -46.562 -29.171 6.550 -3.527 -0.254 -0.424 C13 A1DU4 1 A1DU4 C16 C2 C 0 1 Y N N N N N -46.764 -29.385 5.170 -2.392 -0.227 0.408 C16 A1DU4 2 A1DU4 C15 C3 C 0 1 Y N N N N N -48.175 -29.276 4.909 -2.715 -1.061 1.564 C15 A1DU4 3 A1DU4 C11 C4 C 0 1 Y N N N N N -45.588 -29.661 4.440 -1.278 0.524 0.003 C11 A1DU4 4 A1DU4 C12 C5 C 0 1 Y N N N N N -44.354 -29.456 6.388 -2.430 1.125 -1.903 C12 A1DU4 5 A1DU4 C1 C6 C 0 1 N N N N N N -43.928 -31.477 2.461 1.406 2.453 0.717 C1 A1DU4 6 A1DU4 C10 C7 C 0 1 Y N N N N N -45.966 -28.812 0.169 2.224 -1.688 -1.437 C10 A1DU4 7 A1DU4 C14 C8 C 0 1 Y N N N N N -48.772 -28.965 6.108 -3.962 -1.522 1.375 C14 A1DU4 8 A1DU4 C2 C9 C 0 1 N N N N N N -42.712 -31.501 1.549 2.683 2.843 0.005 C2 A1DU4 9 A1DU4 C3 C10 C 0 1 N N N N N N -42.957 -30.287 0.634 3.211 1.514 -0.582 C3 A1DU4 10 A1DU4 C4 C11 C 0 1 N N S N N N -43.830 -29.339 1.484 1.914 0.684 -0.700 C4 A1DU4 11 A1DU4 C5 C12 C 0 1 Y N N N N N -44.736 -28.385 0.713 2.196 -0.767 -0.406 C5 A1DU4 12 A1DU4 C6 C13 C 0 1 Y N N N N N -44.346 -27.037 0.569 2.425 -1.178 0.894 C6 A1DU4 13 A1DU4 C7 C14 C 0 1 Y N N N N N -45.162 -26.131 -0.127 2.684 -2.509 1.163 C7 A1DU4 14 A1DU4 C8 C15 C 0 1 Y N N N N N -46.388 -26.563 -0.674 2.713 -3.429 0.132 C8 A1DU4 15 A1DU4 C9 C16 C 0 1 Y N N N N N -46.789 -27.907 -0.530 2.477 -3.020 -1.167 C9 A1DU4 16 A1DU4 N1 N1 N 0 1 N N N N N N -44.510 -30.283 2.364 1.005 1.236 0.311 N1 A1DU4 17 A1DU4 N2 N2 N 0 1 N N N N N N -45.643 -29.906 3.076 -0.140 0.582 0.786 N2 A1DU4 18 A1DU4 N3 N3 N 0 1 Y N N N N N -44.388 -29.684 5.076 -1.345 1.178 -1.152 N3 A1DU4 19 A1DU4 N4 N4 N 0 1 Y N N N N N -45.376 -29.192 7.203 -3.499 0.439 -1.561 N4 A1DU4 20 A1DU4 N5 N5 N 0 1 Y N N N N N -47.799 -28.920 7.095 -4.458 -1.046 0.189 N5 A1DU4 21 A1DU4 O1 O1 O 0 1 N N N N N N -44.296 -32.420 3.160 0.832 3.136 1.538 O1 A1DU4 22 A1DU4 H15 H1 H 0 1 N N N N N N -48.668 -29.412 3.958 -2.073 -1.268 2.408 H15 A1DU4 23 A1DU4 H12 H2 H 0 1 N N N N N N -43.378 -29.489 6.849 -2.444 1.676 -2.833 H12 A1DU4 24 A1DU4 H10 H3 H 0 1 N N N N N N -46.278 -29.839 0.289 2.044 -1.368 -2.453 H10 A1DU4 25 A1DU4 H14 H4 H 0 1 N N N N N N -49.826 -28.785 6.257 -4.494 -2.170 2.056 H14 A1DU4 26 A1DU4 H1 H5 H 0 1 N N N N N N -42.669 -32.434 0.968 2.472 3.556 -0.793 H1 A1DU4 27 A1DU4 H2 H6 H 0 1 N N N N N N -41.782 -31.384 2.124 3.400 3.263 0.711 H2 A1DU4 28 A1DU4 H4 H7 H 0 1 N N N N N N -43.487 -30.589 -0.281 3.661 1.676 -1.562 H4 A1DU4 29 A1DU4 H3 H8 H 0 1 N N N N N N -42.006 -29.804 0.364 3.919 1.038 0.097 H3 A1DU4 30 A1DU4 H5 H9 H 0 1 N N N N N N -43.149 -28.727 2.094 1.486 0.792 -1.696 H5 A1DU4 31 A1DU4 H6 H10 H 0 1 N N N N N N -43.414 -26.700 0.997 2.403 -0.458 1.699 H6 A1DU4 32 A1DU4 H7 H11 H 0 1 N N N N N N -44.851 -25.103 -0.243 2.863 -2.829 2.178 H7 A1DU4 33 A1DU4 H8 H12 H 0 1 N N N N N N -47.019 -25.865 -1.203 2.911 -4.470 0.343 H8 A1DU4 34 A1DU4 H9 H13 H 0 1 N N N N N N -47.724 -28.242 -0.954 2.500 -3.739 -1.972 H9 A1DU4 35 A1DU4 H11 H14 H 0 1 N N N N N N -45.978 -29.065 2.651 -0.133 0.170 1.664 H11 A1DU4 36 A1DU4 H13 H15 H 0 1 N N N N N N -47.972 -28.732 8.062 -5.342 -1.239 -0.161 H13 A1DU4 37 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1DU4 C8 C9 DOUB Y N 1 A1DU4 C8 C7 SING Y N 2 A1DU4 C9 C10 SING Y N 3 A1DU4 C7 C6 DOUB Y N 4 A1DU4 C10 C5 DOUB Y N 5 A1DU4 C6 C5 SING Y N 6 A1DU4 C3 C4 SING N N 7 A1DU4 C3 C2 SING N N 8 A1DU4 C5 C4 SING N N 9 A1DU4 C4 N1 SING N N 10 A1DU4 C2 C1 SING N N 11 A1DU4 N1 C1 SING N N 12 A1DU4 N1 N2 SING N N 13 A1DU4 C1 O1 DOUB N N 14 A1DU4 N2 C11 SING N N 15 A1DU4 C11 N3 DOUB Y N 16 A1DU4 C11 C16 SING Y N 17 A1DU4 C15 C16 SING Y N 18 A1DU4 C15 C14 DOUB Y N 19 A1DU4 N3 C12 SING Y N 20 A1DU4 C16 C13 DOUB Y N 21 A1DU4 C14 N5 SING Y N 22 A1DU4 C12 N4 DOUB Y N 23 A1DU4 C13 N5 SING Y N 24 A1DU4 C13 N4 SING Y N 25 A1DU4 C15 H15 SING N N 26 A1DU4 C12 H12 SING N N 27 A1DU4 C10 H10 SING N N 28 A1DU4 C14 H14 SING N N 29 A1DU4 C2 H1 SING N N 30 A1DU4 C2 H2 SING N N 31 A1DU4 C3 H4 SING N N 32 A1DU4 C3 H3 SING N N 33 A1DU4 C4 H5 SING N N 34 A1DU4 C6 H6 SING N N 35 A1DU4 C7 H7 SING N N 36 A1DU4 C8 H8 SING N N 37 A1DU4 C9 H9 SING N N 38 A1DU4 N2 H11 SING N N 39 A1DU4 N5 H13 SING N N 40 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1DU4 SMILES ACDLabs 14.52 "O=C1CCC(c2ccccc2)N1Nc1ncnc2[NH]ccc12" A1DU4 InChI InChI 1.06 "InChI=1S/C16H15N5O/c22-14-7-6-13(11-4-2-1-3-5-11)21(14)20-16-12-8-9-17-15(12)18-10-19-16/h1-5,8-10,13H,6-7H2,(H2,17,18,19,20)/t13-/m0/s1" A1DU4 InChIKey InChI 1.06 BRDHFMKKZPBXER-ZDUSSCGKSA-N A1DU4 SMILES_CANONICAL CACTVS 3.385 "O=C1CC[C@H](N1Nc2ncnc3[nH]ccc23)c4ccccc4" A1DU4 SMILES CACTVS 3.385 "O=C1CC[CH](N1Nc2ncnc3[nH]ccc23)c4ccccc4" A1DU4 SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1ccc(cc1)[C@@H]2CCC(=O)N2Nc3c4cc[nH]c4ncn3" A1DU4 SMILES "OpenEye OEToolkits" 3.1.0.0 "c1ccc(cc1)C2CCC(=O)N2Nc3c4cc[nH]c4ncn3" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1DU4 "SYSTEMATIC NAME" ACDLabs 14.52 "(5S)-5-phenyl-1-[(7H-pyrrolo[2,3-d]pyrimidin-4-yl)amino]pyrrolidin-2-one" A1DU4 "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "(5~{S})-5-phenyl-1-(7~{H}-pyrrolo[2,3-d]pyrimidin-4-ylamino)pyrrolidin-2-one" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1DU4 "Create component" 2026-08-21 RCSB A1DU4 "Initial release" 2026-11-04 RCSB #