data_A1DU9 # _chem_comp.id A1DU9 _chem_comp.name "N-[(6-methylpyridin-2-yl)methyl]-7H-pyrrolo[2,3-d]pyrimidine-4-carboxamide" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C14 H13 N5 O" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2026-08-21 _chem_comp.pdbx_modified_date 2026-10-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 267.286 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1DU9 _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 15HB _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? _chem_comp.pdbx_comp_type ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1DU9 C13 C1 C 0 1 Y N N N N N -48.334 -28.865 4.704 3.818 1.473 -0.339 C13 A1DU9 1 A1DU9 C11 C2 C 0 1 Y N N N N N -46.596 -29.010 6.208 4.139 -0.770 0.041 C11 A1DU9 2 A1DU9 C12 C3 C 0 1 Y N N N N N -48.814 -28.609 5.963 5.135 1.199 -0.366 C12 A1DU9 3 A1DU9 C1 C4 C 0 1 N N N N N N -45.139 -34.951 -2.187 -5.372 -1.164 -1.913 C1 A1DU9 4 A1DU9 C10 C5 C 0 1 Y N N N N N -44.439 -29.483 5.858 2.506 -2.343 0.414 C10 A1DU9 5 A1DU9 C14 C6 C 0 1 Y N N N N N -46.921 -29.129 4.833 3.129 0.215 -0.076 C14 A1DU9 6 A1DU9 C2 C7 C 0 1 Y N N N N N -45.739 -34.232 -0.998 -4.743 -0.510 -0.711 C2 A1DU9 7 A1DU9 C3 C8 C 0 1 Y N N N N N -46.765 -34.816 -0.226 -5.385 -0.566 0.512 C3 A1DU9 8 A1DU9 C4 C9 C 0 1 Y N N N N N -47.274 -34.089 0.866 -4.797 0.040 1.612 C4 A1DU9 9 A1DU9 C5 C10 C 0 1 Y N N N N N -46.744 -32.819 1.150 -3.580 0.682 1.440 C5 A1DU9 10 A1DU9 C6 C11 C 0 1 Y N N N N N -45.725 -32.325 0.315 -2.997 0.696 0.187 C6 A1DU9 11 A1DU9 C7 C12 C 0 1 N N N N N N -45.114 -30.959 0.566 -1.675 1.391 -0.012 C7 A1DU9 12 A1DU9 C8 C13 C 0 1 N N N N N N -45.992 -29.675 2.509 0.692 0.810 -0.043 C8 A1DU9 13 A1DU9 C9 C14 C 0 1 Y N N N N N -45.827 -29.466 3.988 1.789 -0.177 0.070 C9 A1DU9 14 A1DU9 N1 N1 N 0 1 N N N N N N -45.146 -30.571 1.969 -0.589 0.414 0.100 N1 A1DU9 15 A1DU9 N2 N2 N 0 1 Y N N N N N -44.602 -29.632 4.542 1.532 -1.461 0.313 N2 A1DU9 16 A1DU9 N3 N3 N 0 1 Y N N N N N -45.368 -29.186 6.767 3.777 -2.022 0.284 N3 A1DU9 17 A1DU9 N4 N4 N 0 1 Y N N N N N -47.766 -28.700 6.861 5.339 -0.136 -0.141 N4 A1DU9 18 A1DU9 N5 N5 N 0 1 Y N N N N N -45.228 -33.011 -0.737 -3.583 0.105 -0.836 N5 A1DU9 19 A1DU9 O1 O1 O 0 1 N N N N N N -46.879 -29.124 1.867 0.945 1.978 -0.265 O1 A1DU9 20 A1DU9 H13 H1 H 0 1 N N N N N N -48.906 -28.868 3.788 3.359 2.440 -0.481 H13 A1DU9 21 A1DU9 H12 H2 H 0 1 N N N N N N -49.839 -28.375 6.212 5.915 1.925 -0.540 H12 A1DU9 22 A1DU9 H3 H3 H 0 1 N N N N N N -44.361 -34.321 -2.643 -5.036 -2.199 -1.982 H3 A1DU9 23 A1DU9 H2 H4 H 0 1 N N N N N N -44.693 -35.900 -1.855 -6.458 -1.142 -1.813 H2 A1DU9 24 A1DU9 H1 H5 H 0 1 N N N N N N -45.926 -35.155 -2.928 -5.080 -0.627 -2.815 H1 A1DU9 25 A1DU9 H10 H6 H 0 1 N N N N N N -43.435 -29.619 6.231 2.251 -3.374 0.611 H10 A1DU9 26 A1DU9 H4 H7 H 0 1 N N N N N N -47.150 -35.796 -0.467 -6.333 -1.074 0.609 H4 A1DU9 27 A1DU9 H5 H8 H 0 1 N N N N N N -48.062 -34.502 1.478 -5.276 0.013 2.580 H5 A1DU9 28 A1DU9 H6 H9 H 0 1 N N N N N N -47.108 -32.239 1.985 -3.093 1.164 2.275 H6 A1DU9 29 A1DU9 H7 H10 H 0 1 N N N N N N -44.066 -30.977 0.231 -1.650 1.850 -1.000 H7 A1DU9 30 A1DU9 H8 H11 H 0 1 N N N N N N -45.673 -30.212 -0.017 -1.551 2.161 0.750 H8 A1DU9 31 A1DU9 H9 H12 H 0 1 N N N N N N -44.485 -31.006 2.581 -0.791 -0.518 0.277 H9 A1DU9 32 A1DU9 H11 H13 H 0 1 N N N N N N -47.848 -28.560 7.848 6.207 -0.569 -0.114 H11 A1DU9 33 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1DU9 C1 C2 SING N N 1 A1DU9 C2 N5 DOUB Y N 2 A1DU9 C2 C3 SING Y N 3 A1DU9 N5 C6 SING Y N 4 A1DU9 C3 C4 DOUB Y N 5 A1DU9 C6 C7 SING N N 6 A1DU9 C6 C5 DOUB Y N 7 A1DU9 C7 N1 SING N N 8 A1DU9 C4 C5 SING Y N 9 A1DU9 O1 C8 DOUB N N 10 A1DU9 N1 C8 SING N N 11 A1DU9 C8 C9 SING N N 12 A1DU9 C9 N2 DOUB Y N 13 A1DU9 C9 C14 SING Y N 14 A1DU9 N2 C10 SING Y N 15 A1DU9 C13 C14 SING Y N 16 A1DU9 C13 C12 DOUB Y N 17 A1DU9 C14 C11 DOUB Y N 18 A1DU9 C10 N3 DOUB Y N 19 A1DU9 C12 N4 SING Y N 20 A1DU9 C11 N3 SING Y N 21 A1DU9 C11 N4 SING Y N 22 A1DU9 C13 H13 SING N N 23 A1DU9 C12 H12 SING N N 24 A1DU9 C1 H3 SING N N 25 A1DU9 C1 H2 SING N N 26 A1DU9 C1 H1 SING N N 27 A1DU9 C10 H10 SING N N 28 A1DU9 C3 H4 SING N N 29 A1DU9 C4 H5 SING N N 30 A1DU9 C5 H6 SING N N 31 A1DU9 C7 H7 SING N N 32 A1DU9 C7 H8 SING N N 33 A1DU9 N1 H9 SING N N 34 A1DU9 N4 H11 SING N N 35 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1DU9 SMILES ACDLabs 14.52 "Cc1cccc(n1)CNC(=O)c1ncnc2[NH]ccc12" A1DU9 InChI InChI 1.06 "InChI=1S/C14H13N5O/c1-9-3-2-4-10(19-9)7-16-14(20)12-11-5-6-15-13(11)18-8-17-12/h2-6,8H,7H2,1H3,(H,16,20)(H,15,17,18)" A1DU9 InChIKey InChI 1.06 WSGCSOXKHVUFLK-UHFFFAOYSA-N A1DU9 SMILES_CANONICAL CACTVS 3.385 "Cc1cccc(CNC(=O)c2ncnc3[nH]ccc23)n1" A1DU9 SMILES CACTVS 3.385 "Cc1cccc(CNC(=O)c2ncnc3[nH]ccc23)n1" A1DU9 SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "Cc1cccc(n1)CNC(=O)c2c3cc[nH]c3ncn2" A1DU9 SMILES "OpenEye OEToolkits" 3.1.0.0 "Cc1cccc(n1)CNC(=O)c2c3cc[nH]c3ncn2" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1DU9 "SYSTEMATIC NAME" ACDLabs 14.52 "N-[(6-methylpyridin-2-yl)methyl]-7H-pyrrolo[2,3-d]pyrimidine-4-carboxamide" A1DU9 "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "~{N}-[(6-methylpyridin-2-yl)methyl]-7~{H}-pyrrolo[2,3-d]pyrimidine-4-carboxamide" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1DU9 "Create component" 2026-08-21 RCSB A1DU9 "Initial release" 2026-11-04 RCSB #