data_A1DUA # _chem_comp.id A1DUA _chem_comp.name "4-{(2R)-2-[(pyridin-3-yl)methyl]pyrrolidin-1-yl}-7H-pyrrolo[2,3-d]pyrimidine" _chem_comp.type non-polymer _chem_comp.pdbx_type HETAIN _chem_comp.formula "C16 H17 N5" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2026-08-20 _chem_comp.pdbx_modified_date 2026-10-30 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 279.340 _chem_comp.one_letter_code ? _chem_comp.three_letter_code A1DUA _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 15NN _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site RCSB _chem_comp.pdbx_pcm ? _chem_comp.pdbx_comp_type ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal A1DUA C13 C1 C 0 1 Y N N N N N -48.725 -28.703 5.900 3.723 0.761 -1.486 C13 A1DUA 1 A1DUA C16 C2 C 0 1 Y N N N N N -43.977 -32.147 -0.141 -1.996 0.752 -1.447 C16 A1DUA 2 A1DUA C15 C3 C 0 1 Y N N N N N -46.694 -29.073 4.959 1.955 0.157 -0.227 C15 A1DUA 3 A1DUA C11 C4 C 0 1 Y N N N N N -44.326 -29.310 6.238 1.160 1.008 2.184 C11 A1DUA 4 A1DUA C12 C5 C 0 1 Y N N N N N -46.523 -28.982 6.369 2.686 1.138 0.468 C12 A1DUA 5 A1DUA C1 C6 C 0 1 Y N N N N N -44.760 -33.092 -0.834 -2.127 2.129 -1.539 C1 A1DUA 6 A1DUA C10 C7 C 0 1 Y N N N N N -45.496 -29.296 4.217 0.799 -0.369 0.368 C10 A1DUA 7 A1DUA C14 C8 C 0 1 Y N N N N N -48.097 -28.884 4.689 2.658 -0.057 -1.491 C14 A1DUA 8 A1DUA C2 C9 C 0 1 Y N N N N N -45.858 -33.665 -0.165 -2.772 2.814 -0.527 C2 A1DUA 9 A1DUA C3 C10 C 0 1 Y N N N N N -45.447 -32.444 1.758 -3.149 0.864 0.641 C3 A1DUA 10 A1DUA C4 C11 C 0 1 Y N N N N N -44.322 -31.816 1.186 -2.522 0.112 -0.335 C4 A1DUA 11 A1DUA C5 C12 C 0 1 N N N N N N -43.524 -30.799 1.977 -2.411 -1.384 -0.192 C5 A1DUA 12 A1DUA C6 C13 C 0 1 N N R N N N -44.211 -29.420 2.028 -1.115 -1.732 0.543 C6 A1DUA 13 A1DUA C7 C14 C 0 1 N N N N N N -44.593 -28.945 0.620 -1.025 -3.257 0.756 C7 A1DUA 14 A1DUA C8 C15 C 0 1 N N N N N N -46.100 -28.718 0.621 -0.133 -3.723 -0.425 C8 A1DUA 15 A1DUA C9 C16 C 0 1 N N N N N N -46.606 -29.026 2.026 0.858 -2.540 -0.554 C9 A1DUA 16 A1DUA N1 N1 N 0 1 Y N N N N N -46.202 -33.347 1.102 -3.260 2.172 0.517 N1 A1DUA 17 A1DUA N2 N2 N 0 1 N N N N N N -45.450 -29.419 2.810 0.047 -1.336 -0.275 N2 A1DUA 18 A1DUA N3 N3 N 0 1 Y N N N N N -44.333 -29.402 4.907 0.444 0.085 1.567 N3 A1DUA 19 A1DUA N4 N4 N 0 1 Y N N N N N -45.355 -29.100 7.055 2.250 1.528 1.664 N4 A1DUA 20 A1DUA N5 N5 N 0 1 Y N N N N N -47.773 -28.766 6.904 3.753 1.479 -0.318 N5 A1DUA 21 A1DUA H15 H1 H 0 1 N N N N N N -49.783 -28.539 6.043 4.450 0.839 -2.281 H15 A1DUA 22 A1DUA H17 H2 H 0 1 N N N N N N -43.126 -31.684 -0.618 -1.500 0.190 -2.225 H17 A1DUA 23 A1DUA H13 H3 H 0 1 N N N N N N -43.362 -29.420 6.713 0.836 1.349 3.157 H13 A1DUA 24 A1DUA H1 H4 H 0 1 N N N N N N -44.524 -33.369 -1.851 -1.729 2.661 -2.391 H1 A1DUA 25 A1DUA H16 H5 H 0 1 N N N N N N -48.568 -28.884 3.717 2.375 -0.741 -2.277 H16 A1DUA 26 A1DUA H2 H6 H 0 1 N N N N N N -46.455 -34.395 -0.691 -2.878 3.887 -0.591 H2 A1DUA 27 A1DUA H3 H7 H 0 1 N N N N N N -45.717 -32.189 2.772 -3.562 0.373 1.510 H3 A1DUA 28 A1DUA H4 H8 H 0 1 N N N N N N -43.401 -31.170 3.005 -3.263 -1.759 0.376 H4 A1DUA 29 A1DUA H5 H9 H 0 1 N N N N N N -42.536 -30.684 1.508 -2.403 -1.844 -1.181 H5 A1DUA 30 A1DUA H6 H10 H 0 1 N N N N N N -43.505 -28.696 2.461 -1.085 -1.218 1.504 H6 A1DUA 31 A1DUA H8 H11 H 0 1 N N N N N N -44.327 -29.712 -0.123 -0.552 -3.486 1.711 H8 A1DUA 32 A1DUA H7 H12 H 0 1 N N N N N N -44.070 -28.007 0.383 -2.013 -3.714 0.695 H7 A1DUA 33 A1DUA H10 H13 H 0 1 N N N N N N -46.323 -27.673 0.362 0.392 -4.646 -0.177 H10 A1DUA 34 A1DUA H9 H14 H 0 1 N N N N N N -46.582 -29.387 -0.107 -0.720 -3.842 -1.335 H9 A1DUA 35 A1DUA H11 H15 H 0 1 N N N N N N -47.075 -28.133 2.464 1.660 -2.635 0.178 H11 A1DUA 36 A1DUA H12 H16 H 0 1 N N N N N N -47.338 -29.846 1.994 1.268 -2.496 -1.563 H12 A1DUA 37 A1DUA H14 H17 H 0 1 N N N N N N -47.966 -28.668 7.880 4.430 2.132 -0.083 H14 A1DUA 38 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A1DUA C1 C2 DOUB Y N 1 A1DUA C1 C16 SING Y N 2 A1DUA C2 N1 SING Y N 3 A1DUA C16 C4 DOUB Y N 4 A1DUA C7 C8 SING N N 5 A1DUA C7 C6 SING N N 6 A1DUA C8 C9 SING N N 7 A1DUA N1 C3 DOUB Y N 8 A1DUA C4 C3 SING Y N 9 A1DUA C4 C5 SING N N 10 A1DUA C5 C6 SING N N 11 A1DUA C9 N2 SING N N 12 A1DUA C6 N2 SING N N 13 A1DUA N2 C10 SING N N 14 A1DUA C10 N3 DOUB Y N 15 A1DUA C10 C15 SING Y N 16 A1DUA C14 C15 SING Y N 17 A1DUA C14 C13 DOUB Y N 18 A1DUA N3 C11 SING Y N 19 A1DUA C15 C12 DOUB Y N 20 A1DUA C13 N5 SING Y N 21 A1DUA C11 N4 DOUB Y N 22 A1DUA C12 N5 SING Y N 23 A1DUA C12 N4 SING Y N 24 A1DUA C13 H15 SING N N 25 A1DUA C16 H17 SING N N 26 A1DUA C11 H13 SING N N 27 A1DUA C1 H1 SING N N 28 A1DUA C14 H16 SING N N 29 A1DUA C2 H2 SING N N 30 A1DUA C3 H3 SING N N 31 A1DUA C5 H4 SING N N 32 A1DUA C5 H5 SING N N 33 A1DUA C6 H6 SING N N 34 A1DUA C7 H8 SING N N 35 A1DUA C7 H7 SING N N 36 A1DUA C8 H10 SING N N 37 A1DUA C8 H9 SING N N 38 A1DUA C9 H11 SING N N 39 A1DUA C9 H12 SING N N 40 A1DUA N5 H14 SING N N 41 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor A1DUA SMILES ACDLabs 14.52 "n1cnc(c2cc[NH]c12)N1CCCC1Cc1cccnc1" A1DUA InChI InChI 1.06 "InChI=1S/C16H17N5/c1-3-12(10-17-6-1)9-13-4-2-8-21(13)16-14-5-7-18-15(14)19-11-20-16/h1,3,5-7,10-11,13H,2,4,8-9H2,(H,18,19,20)/t13-/m1/s1" A1DUA InChIKey InChI 1.06 JDRYRCMWXXFJJY-CYBMUJFWSA-N A1DUA SMILES_CANONICAL CACTVS 3.385 "C1C[C@H](Cc2cccnc2)N(C1)c3ncnc4[nH]ccc34" A1DUA SMILES CACTVS 3.385 "C1C[CH](Cc2cccnc2)N(C1)c3ncnc4[nH]ccc34" A1DUA SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "c1cc(cnc1)C[C@H]2CCCN2c3c4cc[nH]c4ncn3" A1DUA SMILES "OpenEye OEToolkits" 3.1.0.0 "c1cc(cnc1)CC2CCCN2c3c4cc[nH]c4ncn3" # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier A1DUA "SYSTEMATIC NAME" ACDLabs 14.52 "4-{(2R)-2-[(pyridin-3-yl)methyl]pyrrolidin-1-yl}-7H-pyrrolo[2,3-d]pyrimidine" A1DUA "SYSTEMATIC NAME" "OpenEye OEToolkits" 3.1.0.0 "4-[(2~{R})-2-(pyridin-3-ylmethyl)pyrrolidin-1-yl]-7~{H}-pyrrolo[2,3-d]pyrimidine" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site A1DUA "Create component" 2026-08-20 RCSB A1DUA "Initial release" 2026-11-04 RCSB #